Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058072.1:19030596-19030690 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_6572.ps
Locus Name: Cluster_6572
UAGAAAAUGUGGGGUGAGUGCCUGGGUGUCAUCUAUUAUGUUUUUGCUUGUUAAAACAUAAAAGAUGGCACCAGACAUUCAUCUCAAAAACUUGG
.........(((((((((((.((((.((((((((.(((((((((........))))))))).)))))))))))).)))))))))))......... (-40.50)
.AGAAAAUGUGGGaUGAGUGCC......................................................................... len:21 al:1
..GAAAAUGUGGGaUGAGUGCC......................................................................... len:20 al:3
...AAAAUGUGGGaUGAGUGCC......................................................................... len:19 al:2
....AAAUGUGGGaUGAGUGCC......................................................................... len:18 al:8
.....AAUGUGGGaUGAGUGCC......................................................................... len:17 al:5
....................uCUGGGUGUCAUCUAUUAUGUUUUU.................................................. len:25 al:1
.....................aUGGGUGUCAUCUAUUAUGUUUUU.................................................. len:24 al:1
.....................CUGGGUGUCAUCUAUUAUGUUUUU.................................................. len:24 al:1
.....................aUGGGUGUCAUCUAUUAUGUUUU................................................... len:23 al:1
.....................CgGGGUGUCAUCUAUUAUGUUUUU.................................................. len:24 al:1
.....................CUGGGUGUCAUCUAUUAUGUUU.................................................... len:22 al:2
.....................CUGGGUGUCAUCUgUUAUGUUU.................................................... len:22 al:1
.....................CUGGGUGUCAUCUAUUAUGUUUU................................................... len:23 al:4
......................UGGGUGcCAUCUAUUAUGUUU.................................................... len:21 al:3
......................UGGGUGUaAUCUAUUAUGUUUU................................................... len:22 al:3
......................UGGGUGUCAUCUAUUAUGUUUUUGCUUGU............................................ len:29 al:3
......................UGGGUGaCAUCUAUUAUGUUUU................................................... len:22 al:13
......................UGGGUGcCAUCUAUUAUGUUUUU.................................................. len:23 al:2
......................UaGGUGUCAUCUAUUAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAUUAUGUUUUa.................................................. len:23 al:115
......................UuGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:62
......................cGGGUGUCAUCUAUUAUGU...................................................... len:19 al:2
......................UGGGUGUCAUCUAUUA......................................................... len:16 al:3
......................UuGGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:2
......................UGGGUGUCAUCUAUUAUGcU..................................................... len:20 al:1
......................UGGGUGUCAUCaAUUAUGUUU.................................................... len:21 al:1
......................UGGcUGUCAUCUAUUAUGUUUU................................................... len:22 al:1
......................UGGGUGUCAUCUAUUAgGUUUU................................................... len:22 al:3
......................UGGGUGUCAUCUAUUAUGUUUUUc................................................. len:24 al:4
......................UGGGUaUCAUCUAUUAUGUUUU................................................... len:22 al:23
......................UGGuUGUCAUCUAUUAUGUUUU................................................... len:22 al:2
......................cGGGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:3
......................UGGGUGUCAUCcAUUAUGUUUU................................................... len:22 al:36
......................UGGGUGUCAUCUAUUAUGUUUUUGCUUuU............................................ len:29 al:1
......................UGGGUGUCAUCUAUUAUGUUUc................................................... len:22 al:1731
......................UGGGUGUCAUCUgUUAUGUUUU................................................... len:22 al:36
......................UGGGUGUCAUCUAUUAUGUUgU................................................... len:22 al:49
......................UGGGUGUCAUCUAUUAcGUUUU................................................... len:22 al:44
......................UGGGUGUCAUCUcUUAUGUUUU................................................... len:22 al:2
......................UGGGUGUCAUCUAgUAUGUUUU................................................... len:22 al:3
......................UGGGUGUCAUCUAUUAUGcUU.................................................... len:21 al:4
......................UGGGUGUCAUCUAUUAUGUUUUg.................................................. len:23 al:2
......................UGGGUGUCAUCUAUUgUGUUUU................................................... len:22 al:53
......................UGGGUGUCgUCUAUUAUGUUUUU.................................................. len:23 al:2
......................UGGGUGUCAUCaAUUAUGUUUUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUUAUGUUcUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUUAUGUUcU................................................... len:22 al:142
......................UGGGUaUCAUCUAUUAUGU...................................................... len:19 al:1
......................UGGGUGUCAUCgAUUAUGUUUU................................................... len:22 al:5
......................UGGGUGUCAUCUAUUAUGUUg.................................................... len:21 al:1
......................UGGGUGcCAUCUAUUA......................................................... len:16 al:1
......................UGGGUGUCAUCUAUUAUGgUUUU.................................................. len:23 al:3
......................UGGGUGUCAUCUAUUAUGaUU.................................................... len:21 al:1
......................UGGGUGgCAUCUAUUAUGUUUU................................................... len:22 al:1
......................UGGaUGUCAUCUAUUAUGUUUU................................................... len:22 al:7
......................UGcGUGUCAUCUAUUAUGUUUU................................................... len:22 al:2
......................UGGGUGUCAUCUAUUAUGUUUcU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUcAUGUUUU................................................... len:22 al:27
......................UGGGUGUCAUCUAUUAU........................................................ len:17 al:5
......................UGGGUGaCAUCUAUUAUGUUUUU.................................................. len:23 al:3
......................UGGGUGUCAUCUAaUAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCaAUUAUGUUUU................................................... len:22 al:7
......................UGGGUGUCAUCUAUUAUGUc..................................................... len:20 al:22
......................UGaGUGUCAUCUAUUAUGU...................................................... len:19 al:1
......................UGGGcGUCAUCUAUUAUGUUU.................................................... len:21 al:2
......................UGGGUGUCAUCUAUUAUGUUUgU.................................................. len:23 al:2
......................UGGGUGUCAUCUAUgAUGUUUU................................................... len:22 al:3
......................UGGGUGUCAUCUAUUAUGUgUU................................................... len:22 al:6
......................UGGGUGUaAUCUAUUAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAUUAUGUUUaU.................................................. len:23 al:28
......................UGGGUGUCAUCUAUUAUGUa..................................................... len:20 al:4
......................UGGGUGUCuUCUAUUAUGUUUU................................................... len:22 al:3
......................UaGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:46
......................UGGGUGUCAaCUAUUAUGUUUU................................................... len:22 al:5
......................UGGGUGUCAUCUAUUAUGaUUU................................................... len:22 al:5
......................UGGGUGUCAUCUAUUAUGUaU.................................................... len:21 al:1
......................UuGGUGUCAUCUAUUAUGUUU.................................................... len:21 al:3
......................UGGGUGUCgUCUAUUAUGUUU.................................................... len:21 al:4
......................UGGGUGUCAUCUAUUAUc....................................................... len:18 al:1
......................UGGGcGUCAUCUAUUAUGUUUU................................................... len:22 al:72
......................UGGGUGUCAcCUAUUAUGUUUUU.................................................. len:23 al:4
......................UGGGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:1282
......................UGGGUGUCAUCUAUUAUGgUUU................................................... len:22 al:12
......................UGGGUGUCAUCUAUUAUGUUUUc.................................................. len:23 al:127
......................UGGGUGUuAUCUAUUAUGUUUU................................................... len:22 al:16
......................UGGGUGUuAUCUAUUAUGUUUUU.................................................. len:23 al:3
......................UGGGgGUCAUCUAUUAUGUUUU................................................... len:22 al:10
......................UGGGUuUCAUCUAUUAUGUUUU................................................... len:22 al:7
......................UGGGUGUCAUCUAUUAUuUUUU................................................... len:22 al:11
......................UGGGUGUCAUCUAUUAaGUUUU................................................... len:22 al:5
......................UGGGUGUCAUCUAUUgUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUuUAUUAUGUUUU................................................... len:22 al:7
......................UGGGUGUCAUCUAUc.......................................................... len:15 al:1
......................UGGGUcUCAUCUAUUAUGUUUU................................................... len:22 al:2
......................UGGGUGUCAUCUAUUAUGUUUa................................................... len:22 al:173
......................UGGGUGUCAgCUAUUAUGUUUU................................................... len:22 al:12
......................UGGGUGUCAUCUAUUAUGUUUg................................................... len:22 al:56
......................UGGGUGUCAUCUAUUAUGUU..................................................... len:20 al:80
......................UGGGUGUCAUCUAUaAUGUUUU................................................... len:22 al:3
......................UGGGUGUCAUCUAUUAUGg...................................................... len:19 al:1
......................UGGGUaUCAUCUAUUAUGUUU.................................................... len:21 al:2
......................UGGGUGUCAUaUAUUAUGUUUUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUUAUGUUUUUu................................................. len:24 al:26
......................UGGGUGUCAcCUAUUAUGUUU.................................................... len:21 al:3
......................UGGGUGUCAUCUAUUAUGUUUUUGCUUGa............................................ len:29 al:1
......................gGGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:36
......................UGGGUGUCAUuUAUUAUGUUUUU.................................................. len:23 al:2
......................UGGaUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUUAUaU...................................................... len:19 al:1
......................UGaGUGUCAUCUAUUAUGUUUU................................................... len:22 al:24
......................cGGGUGUCAUCUAUUAUGUUU.................................................... len:21 al:3
......................UGGGUGUCAUCUAUUAUaUUUU................................................... len:22 al:8
......................UGGGUGUCAUCUAUUAUGUUUUUa................................................. len:24 al:4
......................UGGaUGUCAUCUAUUAUGUUU.................................................... len:21 al:2
......................UGGGUGUCAUCUAUUAUGU...................................................... len:19 al:84
......................UGGGUGUCAUCUuUUAUGUUUU................................................... len:22 al:3
......................aGGGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:3
......................UGGGUGUCAUCUAUUAUGUUa.................................................... len:21 al:16
......................UGGGUGUCAUCUAUUAcGUUUUU.................................................. len:23 al:7
......................UGGGUGUCAgCUAUUAUGUUUUU.................................................. len:23 al:3
......................cGGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:69
......................UGGGcGUCAUCUAUUAUGUUUUU.................................................. len:23 al:6
......................UGGGUGUCAUCcAUUAUGUUU.................................................... len:21 al:2
......................UGGGUGUCAUCUAUUAUGUUc.................................................... len:21 al:114
......................UGGGUGUCgUCUAUUAUGUU..................................................... len:20 al:2
......................UGGGaGUCAUCUAUUAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAUUAUGgUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAUUAcGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAUUAUaUUUUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUUAUGa...................................................... len:19 al:2
......................UGGGUGUCAUCUAUUuUGUUUU................................................... len:22 al:2
......................UGGGUGUCAUCUAUUAUGUcU.................................................... len:21 al:4
......................UGGGUGUCAUCUAUU.......................................................... len:15 al:21
......................UGGGaGUCAUCUAUUAUGUUUU................................................... len:22 al:17
......................aGGGUGUCAUCUAUUAUGUUU.................................................... len:21 al:4
......................UGGGUaUCAUCUAUUAUGUUUUU.................................................. len:23 al:2
......................UuGGUGUCAUCUAUUAUGUU..................................................... len:20 al:1
......................UGGGUGUCAUCUgUUAUGUUU.................................................... len:21 al:4
......................UGuGUGUCAUCUAUUAUGUUUU................................................... len:22 al:9
......................UGGGUGUCAUCUAUUAUGUaUU................................................... len:22 al:6
......................UGGGUGUCAUaUAUUAUGUUUU................................................... len:22 al:3
......................UGGGUGUCgUCUAUUAUGUUUU................................................... len:22 al:85
......................UGGGUGUCAUCUAUUAUG....................................................... len:18 al:2
......................UGGGUGUCAUCUAUUgUGUUUUU.................................................. len:23 al:4
......................UGGGUGUCAUCUAUUAUGc...................................................... len:19 al:15
......................UGGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:17901
......................UGuGUGUCAUCUAUUAUGUU..................................................... len:20 al:1
......................UGaGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUcAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAUUAUGcUUUU.................................................. len:23 al:4
......................UGGGUGUCAUCUAUUAUGcUUU................................................... len:22 al:42
......................UGGGUGUCAgCUAUUAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCaAUUAUGUU..................................................... len:20 al:2
......................gGGGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:4
......................UGGGUGUCAUCUAUUAUGUUU.................................................... len:21 al:743
......................UGGGUGUCAcCUAUUAUGUUUU................................................... len:22 al:63
......................UGGGUGUCAUCUAcUAUGUUU.................................................... len:21 al:2
......................UGGGcGUCAUCUAUUAUGUU..................................................... len:20 al:2
......................UGGGUGUCAUCUAUUAUGUUUUUGCUUc............................................. len:28 al:1
......................UcGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:5
......................gGGGUGUCAUCUAUUAUGUUU.................................................... len:21 al:5
......................aGGGUGUCAUCUAUUAUGUUUU................................................... len:22 al:84
......................UGGGUGUCcUCUAUUAUGUUUU................................................... len:22 al:4
......................UGGGUGUCAUCUAUUAUGUaUUU.................................................. len:23 al:1
......................UGGGUaUCAUCUAUUAUGUU..................................................... len:20 al:1
......................UGGGUGUCAUCUAUaAUGUUU.................................................... len:21 al:1
......................UGGGUGUCAUCUAcUAUGUUUU................................................... len:22 al:49
......................UGGGUGcCAUCUAUUAUGUUUU................................................... len:22 al:84
......................UGGGUGUCAUCUAUUAUGUUaU................................................... len:22 al:18
......................aGGGUGUCAUCUAUUAUGU...................................................... len:19 al:1
......................UGaGUGUCAUCUAUUAUGUUU.................................................... len:21 al:2
......................UGGGUGUCAUCUAaUAUGUUUU................................................... len:22 al:6
......................UGGGUGUCAUCUAUUAUcUUUU................................................... len:22 al:1
......................UaGGUGUCAUCUAUUAUGUUUUU.................................................. len:23 al:4
......................UGGGUGUCAUCUAUUcUGUUUU................................................... len:22 al:2
......................UGGGUGUCAUCUAUUAUGUcUU................................................... len:22 al:40
......................UGGGUGUCAUCcAUUAUGUUUUU.................................................. len:23 al:1
......................UGGGUGUCAUCUAUgAUGUUU.................................................... len:21 al:1
.......................uGGUGUCAUCUAUUAUGUUU.................................................... len:20 al:1
.......................GGGUGUCgUCUAUUAUGUUUUU.................................................. len:22 al:1
.......................GGGUGUCAUCUAUUAUGUUUc................................................... len:21 al:2
.......................uGGUGUCAUCUAUUAUGUUUU................................................... len:21 al:7
.......................GGGUGUCAUCUAUUAUGUUUU................................................... len:21 al:2
.........................GUGUCAUCUAUUAUGUUUU................................................... len:19 al:1
....................................................AAAACgUAAAAGAUGGCACC....................... len:20 al:1
....................................................AAAACAUAAAAGAUGGCACu....................... len:20 al:1
......................................................AACAUAAAAGAUGGCACuAGAC................... len:22 al:18
......................................................AACAUAAAAGAUGGCACCAGA.................... len:21 al:3
......................................................AACAUAAAAGAUGGCACCAGu.................... len:21 al:4
......................................................AACAUAAAAGAUGGCACg....................... len:18 al:6
......................................................AACAUAAAAGAUGGCACuAGA.................... len:21 al:82
......................................................AACAUAAAAGAUGGCACCAGAu................... len:22 al:7
......................................................AACAUAAAAGAUGGCACC....................... len:18 al:24
......................................................AACAUAAAAGAUGGCACuAG..................... len:20 al:8
......................................................AACAUAAAAGAUGGCACuAGACA.................. len:23 al:2
......................................................AACAUAAAAGAUGGCACu....................... len:18 al:98
......................................................AACAUAAAAGAUGGCACCAGAaA.................. len:23 al:2
......................................................AACAUAAAAGAUGGCACCAGACu.................. len:23 al:1
......................................................AACAUAAAAGAUGGCACCAG..................... len:20 al:1
......................................................AACAUAAAAGAUGGCACa....................... len:18 al:9