Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058067.1:25838831-25838927 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_2109.ps
Locus Name: Cluster_2109
GCCAGAGAUUUUGCAUUGCAUUUUUCAAAUUAGGAAGGGAGAUGUUUUACUGAACACCGCUCUGCUAAUUUGAAGAGAUACAGUGUAAGAAUUUGCA
((.(((..((((((((((..(((((((((((((..((((.(.(((((....))))).).)))).)))))))))))))...)))))))))).))))). (-31.50)
..CAGAGAUUUUGCAUUGCAUU........................................................................... len:20 al:2
...AGAGAUUUUGCAUUGCAcU........................................................................... len:19 al:2
...AGAGAUUUUGCAUUGCAUU........................................................................... len:19 al:6
.....................UUUUCAAAUUAGGAAGGGAGgUGUUU.................................................. len:26 al:10
.....................UUUUCAAAUUAGGAAGGGAGgUGU.................................................... len:24 al:24
.....................UUUUCAAAUUAGGAAGGGAGgU...................................................... len:22 al:4
.....................UUUUCAAAUUAGGAAGGGAGgUG..................................................... len:23 al:12
.....................UUUUCAAAUUAGGAAGGGAGgUGUU................................................... len:25 al:12
.....................UUUUCAAAUUAGGAAGGGAGgUGUUUU................................................. len:27 al:1
.....................UUUUCAAAUUAGGAAGGGAGcU...................................................... len:22 al:1
......................UUUCAAAUUAGGAAGGGAGAUGUUUa................................................. len:26 al:1
......................UUUCAAAUUAGGAAGGGAGAcGU.................................................... len:23 al:1
......................UUUCAAAUUAGGAAGGGg......................................................... len:18 al:3
......................cUUCAAAUUAGGAAGGGA......................................................... len:18 al:1
......................UUUCAAgUUAGGAAGGGA......................................................... len:18 al:1
......................UUUCAAAUUAGGAAGGGAGAUGUUU.................................................. len:25 al:1
......................UUUCAAAUUAGGAAGGGAGgU...................................................... len:21 al:82
......................UUUCAAAUUAGGAAGGGAGAUGUUc.................................................. len:25 al:1
......................UUUCAAAUUAGGAAGGGAGuUGU.................................................... len:23 al:1
......................UUUCAAAUUAGGAAGGG.......................................................... len:17 al:16
......................UUUCAAAUUAGGAAGGGAG........................................................ len:19 al:21
......................UUUCAAAUUAGGAAGGGAGuUGUU................................................... len:24 al:1
......................UUUCAAAUUAGGAAGGGAGg....................................................... len:20 al:32
......................UUUCAAAUUAGGAAGGGAGgUGUUUU................................................. len:26 al:213
......................UUUCAAAUUAGGAAGGGAGgUGUUUUACUG............................................. len:30 al:2
......................UUUCAAAUUAGGAAGGGAGgUG..................................................... len:22 al:60
......................UUUCAAAUUAGGAAGGGAGuU...................................................... len:21 al:1
......................UUUCAAAUUAGGAAGGGA......................................................... len:18 al:13
......................UUUCAAAUUAGGAAGGGAGcU...................................................... len:21 al:1
......................UUUCAAAUUAGGAAGGGAGAUGUU................................................... len:24 al:2
......................UUUCAAAUUAGGAAGGGAGA....................................................... len:20 al:8
......................UUUCAAAUUAGGAAGGGAGu....................................................... len:20 al:1
......................UUUCAAAUUAGGAAGGGAGgUGUU................................................... len:24 al:2972
......................UUUCAAAUUAGGAAGGGAGgUGUUU.................................................. len:25 al:1175
......................UUUCAAAUUAGGAAGG........................................................... len:16 al:1
......................UUUCAAAUUAGGAAGGGAGgUGUUUUA................................................ len:27 al:8
......................UUUCAAAUUAGGAAGGGAa........................................................ len:19 al:4
......................UUUCAAAUUAGGAAGGGAGgUGU.................................................... len:23 al:565
......................UUUCAAAUUAGGAAGGGAGAUGUc................................................... len:24 al:1
.......................UUCAAAUUAGGAAGGGAGgUGUUUU................................................. len:25 al:5
.......................UUCAAAUUAGGAAGGGAGgU...................................................... len:20 al:1
.......................UUCAAAUUAGGAAGGGAGgUG..................................................... len:21 al:3
.......................UUCAAAUUAGGAAGGGAGgUGU.................................................... len:22 al:3
.......................UUCAAAUUAGGAAGGGAGgUGUU................................................... len:23 al:40
.......................UUCAAAUUAGGAAGGGAGgUGUUU.................................................. len:24 al:20
........................UCAAAUUAGGAAGGGA......................................................... len:16 al:1
.........................CAAAUUAGGAAGGGAGgUGUUU.................................................. len:22 al:2
.........................CAAAUUAGGAAGGGAGgUGUU................................................... len:21 al:3
..........................AAAUUAGGAAGGGAGgUGUUU.................................................. len:21 al:1
..........................AAAUUAGGAAGGGAGgU...................................................... len:17 al:1
...........................AAUUAGGAAGGGAGgUG..................................................... len:17 al:1
...........................AAUUAGGAAGGGAGgUGUU................................................... len:19 al:4
............................AUUAGGAAGGGAGgUGU.................................................... len:17 al:1
............................AUUAGGAAGGGAGgUGUU................................................... len:18 al:1
..............................UAGGAAGGGAGgUGUU................................................... len:16 al:2
.............................................UUUACUGAACACCGCUCUGCUAAUUU.......................... len:26 al:1
.............................................UUUACUGAACACCGCUCUGCUAAUUUGAAG...................... len:30 al:1
.............................................UUUACUGAACACCGCUCUGCUAAUUUGAAGA..................... len:31 al:2
..............................................UUACUGAACACCGCUCUGCUAAUUUGAAGAa.................... len:31 al:1
..............................................UUACUGAACACCGCUCUGCUAAUUUGAAGAG.................... len:31 al:2
..............................................UUACUGAACACCGCUCUGCUAAUUUGA........................ len:27 al:1
..............................................UUACUGAACACCGCUCUGCUAAUUUGAAG...................... len:29 al:2
......................................................CACCGCUCUGuUAAUUUGAAGAG.................... len:23 al:1
......................................................CACCGCUCUGCUAAUUUGAAGAGA................... len:24 al:4
......................................................CACCGCUCUGCUAAUUUGAAa...................... len:21 al:1
......................................................CACCGCUCUGCUAAUU........................... len:16 al:1
......................................................CACCGCUCUGCUAAUUUGAA....................... len:20 al:5
......................................................CACCGCUCUGCUAAUUUGAAGA..................... len:22 al:8
......................................................CACCGCUCUGCUAAUUU.......................... len:17 al:1
......................................................CACCGCUCUGCUAAUUUGAAu...................... len:21 al:1
......................................................CACCGCUCUGCUAAUUUGA........................ len:19 al:16
......................................................CACCGCUCUGCUAAUUUGAAGu..................... len:22 al:1
......................................................CACCGCUCUGCUAAUUUGAAGAc.................... len:23 al:1
......................................................CACCGCUCUGCUAAUUUGAAG...................... len:21 al:8
.......................................................ACCGCUCUGCUAAUUUGA........................ len:18 al:1
........................................................uCGCUCUGCUAAUUUGAAG...................... len:19 al:1