Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058067.1:5656192-5656286 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_1552.ps
Locus Name: Cluster_1552
GACUUUUUCUGGUUAAGAAAUGGACAAAGGCUCCAAGCAAAUGUUUAUCAUUUGCUAGUUGCUUUUGUCCCGUUCUUAAACUAGAUAUUCAUAAG
.......((((((((((((..((((((((((..(.((((((((.....)))))))).)..))))))))))..))))).))))))).......... (-37.60)
....................cGGACAAAGGCUCCAAGCAAAUG.................................................... len:23 al:1
....................UGGACAAAGGCUCCAAGCAAA...................................................... len:21 al:2
....................UGGACAAAGGCUCCgAGCAAAUG.................................................... len:23 al:1
....................UGGAuAAAGGCUCCAAGCAAAUG.................................................... len:23 al:1
....................UGGACAAAGGCUCCAAGCAAAUu.................................................... len:23 al:2
....................UGGACAAAGGCUCCAAGCA........................................................ len:19 al:1
....................UGGACAAAGGuUCCAAGCAAAUG.................................................... len:23 al:1
....................UGGACAAAGGCUCCAAGCAAAUGUUU................................................. len:26 al:1
....................UGGACAAAGGCUCCAAGCAAAUGa................................................... len:24 al:1
....................UGGACAAAGGCUCCAAGCAAAUG.................................................... len:23 al:123
....................UGGACAAAGGCUCCAAGCAAAU..................................................... len:22 al:4
....................UGGACAAAGGCUCCAAGCAAAUc.................................................... len:23 al:2
....................UGGACAAAGGCUCCAAGC......................................................... len:18 al:1
....................aGGACAAAGGCUCCAAGCAAAUGU................................................... len:24 al:1
....................UGGACAAAGGCcCCAAGCAAAUG.................................................... len:23 al:1
....................UGGACAAAGGCUCCA............................................................ len:15 al:1
....................UGGACAAAGGCUCCAAGCAAAUa.................................................... len:23 al:13
....................UGGACAAAGGCcCCAAGCAAAU..................................................... len:22 al:2
....................UGGACAAAGGCUCCAAGCAAAUGU................................................... len:24 al:5
....................UGGACAAAGGCaCCAAGCAAAUG.................................................... len:23 al:1
....................UGGACAAAGGCUCCAAGCAA....................................................... len:20 al:3
................................................gAUUUGCUAGUUGCUUU.............................. len:17 al:1
..................................................UaUGCUAGUUGCUUUUGUCCCGU...................... len:23 al:1
..................................................aUUGCUAGUUGCUUUUGUCCCGU...................... len:23 al:2
..................................................UUUGCUAGUUGCUUcUGUCCCGU...................... len:23 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCG....................... len:22 al:6
..................................................UUcGCUAGUUGCUUUUGUCCCGU...................... len:23 al:5
..................................................UUUGCUAGUcGCUUUUGUCCCGU...................... len:23 al:2
..................................................UUUGCUgGUUGCUUUUGUCCCGUU..................... len:24 al:1
..................................................UUUGCUAGUUGCUUUUGUCC......................... len:20 al:12
..................................................UUUGCcAGUUGCUUUUGUCCCGU...................... len:23 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCGUU..................... len:24 al:101
..................................................UUUGCUAGUaGCUUUUGUCCCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCcUUUGUCCCGU...................... len:23 al:4
..................................................UUUGCUAGUUGCUUUUGUuCCGU...................... len:23 al:3
..................................................UUUGCUAGUUGCUUUUGUCCuGU...................... len:23 al:8
..................................................UUUGCUAGUUGCUUUUGUCCuGUU..................... len:24 al:1
..................................................UcUGCUAGUUGCUUUUGUCCCGUU..................... len:24 al:1
..................................................UUUGCUAGUUGCUUUUGUC.......................... len:19 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCuUU..................... len:24 al:3
..................................................UUUGCUAGUUGCUUUUGUCCCGc...................... len:23 al:222
..................................................UUUGCUAGcUGCUUUUGUCCCGU...................... len:23 al:7
..................................................UUUGCUAGUUGCUUUUGcCCCGU...................... len:23 al:3
..................................................UUUGCUAGUUGCUUUUGUCaCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGUUuU................... len:26 al:2
..................................................UUUGCUcGUUGCUUUUGUCCCGU...................... len:23 al:3
..................................................UUUGCUAaUUGCUUUUGUCCCGU...................... len:23 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCGUUa.................... len:25 al:4
..................................................UUUGCUAGUUGCUUUUGUCCC........................ len:21 al:18
..................................................UUUGCUAGUUGCUUUUGUCCCaU...................... len:23 al:5
..................................................UUUGCUAGUUGCUUUUGUCCaGU...................... len:23 al:6
..................................................UUUGCUAGUUGCUUUUGUCCgGU...................... len:23 al:1
..................................................UUUGCaAGUUGCUUUUGUCCCGUU..................... len:24 al:1
..................................................UUUGCUAGUUGCUUUUGUCu......................... len:20 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCc....................... len:22 al:8
..................................................UaUGCUAGUUGCUUUUGUCCCGUU..................... len:24 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGU...................... len:23 al:893
..................................................cUUGCUAGUUGCUUUUGUCCCGU...................... len:23 al:3
..................................................UUUGCUAGUUGCUUUUGUCCa........................ len:21 al:9
..................................................UUUGCUAGUUGCUUUUGUCCCGUUC.................... len:25 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGgU..................... len:24 al:3
..................................................UUUGCUAGUUGCUUUUGUCCu........................ len:21 al:14
..................................................UUUGCUAGUUGCUUUUGUCCCcU...................... len:23 al:26
..................................................UUUGCUAGUUGCUUUUGUCCCGUc..................... len:24 al:19
..................................................UUUGCaAGUUGCUUUUGUCCCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCUUUUGUCa......................... len:20 al:1
..................................................UUUGCUuGUUGCUUUUGUCCCGUU..................... len:24 al:2
..................................................UUUGCUAGUUGCUUUaGUCCCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGa...................... len:23 al:57
..................................................UUUGCUAGUUGCUUU.............................. len:15 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCGcU..................... len:24 al:61
..................................................UUUGCUAGUUGCUUUcGUCCCGU...................... len:23 al:8
..................................................UUUGCUAGUUGCUUUUGUCCCu....................... len:22 al:23
..................................................UUUGCUAGUUGCaUUUGUCCCGUU..................... len:24 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGUUaUU.................. len:27 al:1
..................................................UUUGuUAGUUGCUUUUGUCCCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGcUC.................... len:25 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCGUa..................... len:24 al:12
..................................................UUUGCUAGUUGCUUUcGUCCCGUU..................... len:24 al:1
..................................................UUUGCUAGUUGCUcUUGUCCCGU...................... len:23 al:3
..................................................UUUGCUAGUUGCUUUUGUCCCuU...................... len:23 al:5
..................................................UUUGCUAGUUGCUUUUGUaCCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCGUUu.................... len:25 al:14
..................................................UUUGCUAGUUaCUUUUGUCCCGU...................... len:23 al:1
..................................................UUUGCUAGUUGCUUUUGUCCCa....................... len:22 al:4
..................................................UUUGCUAGUUGCUUUUGUCCCGUUg.................... len:25 al:2
..................................................UUUGCUAGUUGCUUUUGUu.......................... len:19 al:1
..................................................UUUGCUAGaUGCUUUUGUCCCGU...................... len:23 al:2
..................................................UUUGCUAGUUGCUUUUGUCCCGg...................... len:23 al:28
...................................................UUGCUAGUUGCUUUUGUCCCGUU..................... len:23 al:4
...................................................UUGCUAGUUGCUUUUGUCCCGU...................... len:22 al:8
...................................................UUGCUAGUUGCUUUUGUCCCGUc..................... len:23 al:1
...................................................UUGCUAGUUGCUUUUGUCC......................... len:19 al:1
...................................................UUGCUAGUUGCUUUUGUCCCGUa..................... len:23 al:2
....................................................UGCUAGUUGCUUUUGUCC......................... len:18 al:1
....................................................UGCUAGUUGCUUUUGUCCCGU...................... len:21 al:4
....................................................UGCUAGUUGCUUUUGUCCu........................ len:19 al:1