Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.1.1-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058074.1:2966501-2966594 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.1.1-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_7327.ps
Locus Name: Cluster_7327
UUCUGUUUACGGUUUAACUGGGUAGCAUAACAUUGUAAGAGAUCUUUAAAGGUCUCUUACAUUGUUGUGCUGCCUGGAAAAACUGAACUGACUG
.((.(((..((((((..(((((((((((((((.((((((((((((....)))))))))))).)))))))))))))))..))))))))).))... (-47.20)
......................UAGCAUAACAUUGaAAG....................................................... len:17 al:1
......................UAGCAUAACAUUGUAAGAGAcCUUU............................................... len:25 al:1
......................UgGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:23
......................UAGCAUAACAUUGUAAGAGAUCa................................................. len:23 al:624
......................UAGCAcAACAUUGUAAGAGAUCU................................................. len:23 al:13
......................UAGCAUAgCAUUGUAAGAGAUC.................................................. len:22 al:5
......................UAGCAUAACAUUGUAAGAGAgCUU................................................ len:24 al:1
......................UAGCAUAACAUUGUAAGAGAUCaU................................................ len:24 al:1
......................UAGCAUAACAUUGUAAGAGgUCUU................................................ len:24 al:3
......................UAGCAUAACcUUGUAAGAGAUCU................................................. len:23 al:1
......................gAGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
......................UAGCAUAACAUgGUAAGAGAUCU................................................. len:23 al:1
......................UAGCAUAACAUUGUAAGAGAUCUUUAAAGu.......................................... len:30 al:1
......................gAGCAUAACAUUGUAAGAGAUC.................................................. len:22 al:1
......................UAGCAUAACAcUGUAAGAGAUCU................................................. len:23 al:8
......................UAGCAUAACAUaGUAAGAGAUCU................................................. len:23 al:3
......................UAGCAUAACAUUGcAAGAGAUCUU................................................ len:24 al:1
......................aAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:8
......................cAGCAUAACAUUGUAAGAGAUC.................................................. len:22 al:4
......................gAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:17
......................UAGCAUAAuAUUGUAAGAGAUCU................................................. len:23 al:4
......................UAGCAUAACAUUGUAAGAGAUCUUUAu............................................. len:27 al:4
......................UAGCAUgACAUUGUAAGAGAUCU................................................. len:23 al:8
......................UAGCAUAACAUUGUAAGA...................................................... len:18 al:3
......................UAGCAUAACAUUGUAAGAGAUCUUaA.............................................. len:26 al:2
......................UAGCAUAACAUUGUAgG....................................................... len:17 al:6
......................UAGCAUAACAUUGUAAGAGAUCc................................................. len:23 al:841
......................UAGCAgAACAUUGUAAGA...................................................... len:18 al:3
......................UAGCAUAACAaUGUAAGAGAUCU................................................. len:23 al:2
......................UAGCAUAACAUUGUAAGAGAUCUaU............................................... len:25 al:22
......................UAGCAUAACAUUGUAAGAaAUCU................................................. len:23 al:1
......................UAGCAUAACAUUGUAcGAGAUC.................................................. len:22 al:1
......................UcGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:7
......................UAGCAUAACAUUGUAcG....................................................... len:17 al:1
......................UAGCAUAACAUUGaAAGAGAUCU................................................. len:23 al:1
......................UAGCAUAACAUUGUAAGAGAUCUUUu.............................................. len:26 al:30
......................UAGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:334
......................UAGCAUAACAUUGUAAGAGAUCUa................................................ len:24 al:21
......................UAGCAUAACAUcGUAAGAGAUCU................................................. len:23 al:19
......................UAGCAUAACAgUGUAAGAGAUCU................................................. len:23 al:3
......................UAGCAUAACAUcGUAAGAGAUCUU................................................ len:24 al:3
......................UAGCAUAgCAUUGUAAGAGAU................................................... len:21 al:1
......................UAGCAUAACAUUGUAAGAGAaCU................................................. len:23 al:4
......................UAGCAUAACAUUGUAAGAGAUCUg................................................ len:24 al:3
......................UAGCAUAACuUUGUAAGAGAUCU................................................. len:23 al:1
......................cAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:24
......................aAGCAUAACAUUGUAAG....................................................... len:17 al:1
......................UAGCAUAACAUUGUAAGAGA.................................................... len:20 al:3
......................UAGCuUAACAUUGUAAGAGAUCU................................................. len:23 al:3
......................UAGCAUAACAUcGUAAG....................................................... len:17 al:3
......................UAGCAUAACAUUGUAAGAuAUCU................................................. len:23 al:2
......................UAGCAUAACAUUGUAAGAGAUCUUUA.............................................. len:26 al:5
......................UAGCAUAACgUUGUAAGAGAUCUUU............................................... len:25 al:2
......................UuGCAUAACAUUGUAAGAGAUC.................................................. len:22 al:1
......................UAaCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
......................aAGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
......................UAGCAUAACAUUGUAAGAGAc................................................... len:21 al:2
......................UAGCAUAACAUUGUAAGAGAUCUUc............................................... len:25 al:22
......................UAGCAUAACAcUGUAAG....................................................... len:17 al:2
......................UAGCAUAACAUcGUAAGAGAUC.................................................. len:22 al:3
......................UAGCAUAACAUUGUAcGAGAUCU................................................. len:23 al:6
......................UAGCAUAACAUUGUAAGAGAUCUaUA.............................................. len:26 al:1
......................UAGCAUAACAUUGUAAGuGAUCU................................................. len:23 al:2
......................UAGaAUAACAUUGUAAGAGAUCU................................................. len:23 al:2
......................UAGCAUAACAUUGUAAGgGAUCU................................................. len:23 al:29
......................UAGCAUAACAUUGUAAGAGAUCUUUuA............................................. len:27 al:6
......................UAGCAUAACAUUGUAAGAGAUCUUUg.............................................. len:26 al:1
......................UAGCAgAACAUUGUAAGAGAUC.................................................. len:22 al:1
......................UAGCAgAACAUUGUAAGAGAUCU................................................. len:23 al:1
......................UAGCAUAACAUUGUAAGAGAUCUcU............................................... len:25 al:4
......................UAGCAUAAaAUUGUAAGAGAUCU................................................. len:23 al:2
......................UAGCAUAACgUUGUAAGAGAUCUUUAAA............................................ len:28 al:1
......................UgGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
......................UAGCAUAACAUUGUAAGAGAUa.................................................. len:22 al:6
......................UAGCAUAACAUUGUAgGAGAUCU................................................. len:23 al:16
......................UAGCAUAACAUUGUAAGAGg.................................................... len:20 al:1
......................UAGCAUAgCAUUGUAAGAGAUCUUU............................................... len:25 al:1
......................UAGCAUAACAUUGUAAGAGAUu.................................................. len:22 al:14
......................UAGCAUAACAUUGUAAGAGAUCUUa............................................... len:25 al:9
......................UAGCAUAACAUUGUAAGAGAUaU................................................. len:23 al:3
......................UAGCAUAACAUUGUAAGAGu.................................................... len:20 al:1
......................UAGuAUAACAUUGUAAGAGAUCU................................................. len:23 al:10
......................UAGCAaAACAUUGUAAGAGAUCU................................................. len:23 al:5
......................UAGCAUAuCAUUGUAAGAGAUCU................................................. len:23 al:2
......................UAGCAUAACAUUGUAAGAGuUCU................................................. len:23 al:3
......................cAGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
......................UAGCAUAACAUaGUAAGAGAUCUUUAAAGG.......................................... len:30 al:1
......................cAGCAUAACAUUGUAAG....................................................... len:17 al:2
......................UAGCAUAACAUUGUAAGAGAUCcU................................................ len:24 al:13
......................UAGCAUAACAUUGUAAG....................................................... len:17 al:351
......................UAGCAUAACAUUGUAAGAGAU................................................... len:21 al:7
......................UAGCAUAACAUUGUuAGAGAUCU................................................. len:23 al:1
......................UAaCAUAACAUUGUAAGAGAUCU................................................. len:23 al:4
......................gAGCAUAACAUUGUAAG....................................................... len:17 al:1
......................UAGCAUAACAUUGUAAGAGAUCUUUAuA............................................ len:28 al:2
......................UAGCAUAACAUUGUAAGAGAUCUUUAAAGG.......................................... len:30 al:1
......................UAGCAUAACAUUGUAAGAGAgCU................................................. len:23 al:8
......................UAGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:5039
......................UAGCAUAACAUUGUAAGgGAUCUU................................................ len:24 al:1
......................UAGCAUAACAUUGUAAGAGAUuU................................................. len:23 al:6
......................UAGCAUAACAUUGUAAGAGAUC.................................................. len:22 al:209
......................UAGCAUAACAUUGUAAGAGAUCUc................................................ len:24 al:35
......................UAGCAUAACAUUGUAAGAGcUCU................................................. len:23 al:2
......................UuGCAUAACAUUGUAAGAGAUCU................................................. len:23 al:10
......................UAGuAUAACAUUGUAAG....................................................... len:17 al:1
......................UAGCAUAgCAUUGUAAGAGAUCUU................................................ len:24 al:2
......................UuGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:1
......................UAGCAUAACAUUGcAAGAGAUCU................................................. len:23 al:12
......................UAGCAUAACAUUGUgAG....................................................... len:17 al:1
......................UAGCAUAgCAUUGUAAG....................................................... len:17 al:8
......................UAGCAUAACAUUGUAAGAGAcCUU................................................ len:24 al:1
......................UAGCAUAACAUUGUAAu....................................................... len:17 al:1
......................UAGCAUAACAUUGUAAGAGAUCUUU............................................... len:25 al:140
......................UAGCAUAACAUUGUAuGAGAUCUUU............................................... len:25 al:1
......................UAGCAUAACAUUGUAAc....................................................... len:17 al:1
......................UAGCAUAACAUUGUAuGAGAUCU................................................. len:23 al:3
......................UAGCAUAACAUUGUAAGAGAcCU................................................. len:23 al:61
......................UAGCgUAACAUUGUAAGAGAUCUUU............................................... len:25 al:1
......................UAGCgUAACAUUGUAAGAGAUCU................................................. len:23 al:18
......................UAGCAUAACAUUGUAAGAGAUuUU................................................ len:24 al:1
......................UAGCAUAACAUUGUAAGAGAUCUUUc.............................................. len:26 al:2
......................UAGCAUAACAUUGUgAGAGAUCU................................................. len:23 al:15
......................UAGCAUAACAUUGUAAaAGAUCU................................................. len:23 al:1
......................UAGCAUAACAUUGUAAGAGgUCU................................................. len:23 al:30
......................UAGCAUAACgUUGUAAGAGAUCU................................................. len:23 al:13
......................UAGCAUAACAUUGUcAGAGAUCU................................................. len:23 al:1
......................UAGCAUAACAUUaUAAGAGAUCU................................................. len:23 al:2
......................UgGCAUAACAUUGUAAGAGAUCUU................................................ len:24 al:3
......................UAGCAUAACAUUGUAAGAGAgC.................................................. len:22 al:1
......................UAGCAUAACAUUGUAAGAGAUCg................................................. len:23 al:159
......................UAGCAUAACAUUGUAAGAGAUCUUg............................................... len:25 al:3
......................UAGCAUAACAUUGUAAuAGAUCUU................................................ len:24 al:1
......................UAGCAUuACAUUGUAAGAGAUC.................................................. len:22 al:1
......................UAGCAUAgCAUUGUAAGAGAUCU................................................. len:23 al:55
......................UAGCAUAACAUUuUAAGAGAUCU................................................. len:23 al:1
......................UAGCAUAACAUUGUgAGAGAUCUUU............................................... len:25 al:2
.......................AGCAUAACAUUGUAAGAGAUuU................................................. len:22 al:1
.......................AGCAUAACAUUGUAAGAGAUCa................................................. len:22 al:3
.......................AGCAUAACAUUGUAAGAGAUCU................................................. len:22 al:8
........................GCAUAACAUUGUAAGAGAUCc................................................. len:21 al:1
........................GCAUAACAUUGUAAGAGAUCU................................................. len:21 al:1
........................GCAUAACAUcGUAAGAGAUCU................................................. len:21 al:1
.........................CAUAACAUUGUAAGAGAUCU................................................. len:20 al:2
..........................AUAACAUUGUAAGAGAUCc................................................. len:19 al:1
..........................AUAACAUUGUAAGAGAUCU................................................. len:19 al:5
..........................AUAgCAUUGUAAGAGAUCU................................................. len:19 al:1
............................................UUUAAAGGUCUCUUACAUUGUUGUGCUGCu.................... len:30 al:2
............................................UUUAAAGGUCUCUUACAUUGUUGUGCUGCa.................... len:30 al:1
.............................................UUAAAGGUCUCUUACAUUGUUGUGCUGCu.................... len:29 al:2
.............................................UUAAAGGUCUCUUACAUUGUUGUGCUGCCa................... len:30 al:1
.............................................UUAAAGGUCUCUUACAUUGUUGUGCUGCC.................... len:29 al:6
.............................................UUAAAGGUCUCUUACAUUGUUGUGCUGCa.................... len:29 al:2
...................................................GUCUCUUACAUUGUUGUGCUGCCa................... len:24 al:98
...................................................GUCUCUUACAUUGUUGUGuUGCC.................... len:23 al:1
...................................................GUCUCUUACAUUGUUGUGCUGu..................... len:22 al:31
...................................................GUCUCUUACAUUGUUGUGCUG...................... len:21 al:18
...................................................GUCUCUUACAUUGcUGUGCUGCC.................... len:23 al:3
...................................................GUCUCUUACAUUGUUGUGCc....................... len:20 al:1
...................................................GUCUCUUACAUUGUUGUGCUGuC.................... len:23 al:2
...................................................GUCUCUUACAUUGUUGUGCUaCC.................... len:23 al:1
...................................................GUCUCUUACAUUGUUGUGCUGCCc................... len:24 al:12
...................................................GUCUCUUACAUUGUUGUGCUuCCU................... len:24 al:1
...................................................GUCUCgUACAUUGUUGUGCUGCC.................... len:23 al:1
...................................................GUCUCUUACAUUGUUGUGCUGCg.................... len:23 al:12
...................................................GUCUCUUACAUUGUUGUGCUGa..................... len:22 al:6
...................................................GUCUCcUACAUUGUUGUGCUGCC.................... len:23 al:3
...................................................GUCUCUUACAUcGUUGUGCUGCC.................... len:23 al:2
...................................................GUCUCUUACAUUGUUGUGCUGCCUa.................. len:25 al:2
...................................................GUCUCUUACAUUGUUGUGCUGCa.................... len:23 al:138
...................................................GUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:273
...................................................aUCUCUUACAUUGUUGUGCUGCC.................... len:23 al:2
...................................................GUCcCUUACAUUGUUGUGCUGC..................... len:22 al:1
...................................................GUCUCUUACAUUGUUGUGCUGCCUu.................. len:25 al:11
...................................................GUCUCUUgCAUUGUUGUGCUGC..................... len:22 al:2
...................................................aUCUCUUACAUUGUUGUGCUGCCU................... len:24 al:1
...................................................GUCUCUUACAUUGUUGUGCUa...................... len:21 al:1
...................................................GUCUCUUACAUUGUUGUGCUGC..................... len:22 al:93
...................................................GUCUCUUACAUUGUUGUGCUGCCUc.................. len:25 al:1
...................................................aUCUCUUACAUUGUUGUGCUGC..................... len:22 al:1
...................................................GUCUCUUACAUUGUUGUGC........................ len:19 al:1
...................................................GUCUCUUACAUUGUUGUGCaG...................... len:21 al:1
...................................................GUCUCUUACAUUGUUGUGCcGC..................... len:22 al:1
...................................................GUCUCUUACAUUGUUGUGCUGaC.................... len:23 al:2
...................................................GUCUCUUACAUUGUUGUGCU....................... len:20 al:6
...................................................GcCUCUUACAUUGUUGUGCUGCC.................... len:23 al:3
...................................................GUCUCUUACAUUGUUGUGCg....................... len:20 al:1
...................................................GUCUCUUACAUUGUUGUGCUGg..................... len:22 al:2
...................................................GUCUCUUACAUUGUUGUGCUcCCU................... len:24 al:1
...................................................aUCUCUUACAUUGUUGUGCUG...................... len:21 al:1
...................................................GUCUCUUACAUUGUUGUGCUGCuU................... len:24 al:1
...................................................GUCUCUUACgUUGUUGUGCUGCC.................... len:23 al:1
...................................................GUCUCUUACAUUGUUGcGCUGCC.................... len:23 al:1
...................................................GUCUCUUACAUUGUUGUGCUGCaU................... len:24 al:2
...................................................GUCUCUUACAUUGUUGUGCUGCCg................... len:24 al:7
...................................................GUCcCUUACAUUGUUGUGCUGCC.................... len:23 al:2
...................................................GUCUCUUACAUUGUcGUGCUGCC.................... len:23 al:1
...................................................GUCUCUUACAUUGUUGUGCUGCu.................... len:23 al:215
...................................................GUCUCUUACAUUGUUGUGCUGCCU................... len:24 al:42
....................................................UCcCUUACAUUGUUGUGCUGCCU................... len:23 al:2
....................................................UCUCUUACAUUGUUGUGCUu...................... len:20 al:2
....................................................UCUCUUACAUUGUUGUGCUGuC.................... len:22 al:1
....................................................UCUCUUACAUUGUUGUGCUGaC.................... len:22 al:3
....................................................UCUCUUACAUUGUUGUGCUGCu.................... len:22 al:295
....................................................UCUCUUACAUUGUUGUGCUGa..................... len:21 al:5
....................................................UCUCUUACAUUGUUGUGCc....................... len:19 al:2
....................................................UCUCUUACAUUGUUGUGCU....................... len:19 al:5
....................................................UCUCUUACAUUGUUGUGCUGCCc................... len:23 al:5
....................................................UCUCUUAuAUUGUUGUGCUGCC.................... len:22 al:1
....................................................UCUCUUACAUUGUUGUGCUaCC.................... len:22 al:4
....................................................UCUCUUACAUUGUUGUGgUGC..................... len:21 al:2
....................................................gCUCUUACAUUGUUGUGCUGC..................... len:21 al:1
....................................................UCUCUUACAUUGUcGUGCUGCC.................... len:22 al:4
....................................................UCUCUUACAUUGUUGUGCUcC..................... len:21 al:2
....................................................UCUCUUACAUUGUUGUGCUG...................... len:20 al:16
....................................................UCUCUUACAUUGUUGUGCUGCC.................... len:22 al:389
....................................................UCUCUUACAUUGUUGUGCUGCg.................... len:22 al:11
....................................................UCaCUUACAUUGUUGUGCUGCC.................... len:22 al:2
....................................................UCUCUUACAUUGUUGUGCUGCa.................... len:22 al:195
....................................................UCUCUUAaAUUGUUGUGCUGCC.................... len:22 al:1
....................................................UCUCUUACAUUGUUGUGCgGC..................... len:21 al:1
....................................................UCUCUUACAUUGUUGUGCUcCCU................... len:23 al:1
....................................................UCUCUUACAUUGUUGUGCUGCCa................... len:23 al:94
....................................................UCUCUUACAUUGUUGUGCUa...................... len:20 al:6
....................................................aCUCUUACAUUGUUGUGCUGCC.................... len:22 al:2
....................................................UCUCUUACAUUGUUGUGCUGCCUc.................. len:24 al:1
....................................................UCUCUUACAUUGUUGUGCUGCCU................... len:23 al:37
....................................................UCUCUUACAUUGUUGUGCcGCC.................... len:22 al:4
....................................................UCUCUUACAUUGUUGUGCUGCCUu.................. len:24 al:5
....................................................UCcCUUACAUUGUUGUGCUGCC.................... len:22 al:4
....................................................UCUCUUACAUUGUUGUGCUGu..................... len:21 al:16
....................................................UCUCUUACAUaGUUGUGCUGCC.................... len:22 al:1
....................................................UCUCUUACAUUGUUGUaCUGCC.................... len:22 al:1
....................................................UCUCUUACAUUGUUGUGCUGCCg................... len:23 al:8
....................................................UaUCUUACAUUGUUGUGCUGCC.................... len:22 al:3
....................................................UCUCUUAuAUUGUUGUGCUGC..................... len:21 al:1
....................................................UCUCUUACAUUGUUGUGCUGC..................... len:21 al:38
....................................................UCUCUUACAUUGUUaUGCUGCC.................... len:22 al:1
....................................................UCUCUUACAUUGcUGUGCUGCC.................... len:22 al:4
....................................................UCUCUUACgUUGUUGUGCUGCC.................... len:22 al:1
....................................................UCUCUUACAUUGUUGUGCUGCuU................... len:23 al:1
....................................................UCUCUUACAUcGUUGUGCUGCC.................... len:22 al:2
.....................................................CUCUUACAUUGUUGUGCUGu..................... len:20 al:2
......................................................UCUUACAUUGUUGUGCUGCCa................... len:21 al:1
...........................................................CAUUGUUGUGCUGCu.................... len:15 al:3
...........................................................CAUUGUUGUGCUGCC.................... len:15 al:1