Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.1-Apul-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam
Location: NC_058079.1:2370936-2371026 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.1-Apul-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_10983.ps
Locus Name: Cluster_10983
AAGGAAUGUAUUUUAUUUCACGCAUCAUGUUUCCCUCUUUAUUUUAAAUCAAGGAGGAAGCAUGAUACGUAAAAUAAAGGAAAAAUAAAGA
..........((((((((.(((.(((((((((((.(((((..........)))))))))))))))).))).))))))))............ (-24.80)
...................ACGCAUCAUGUUUCCCUCUUUA.................................................. len:22 al:1
....................CGCAUCAUGUUUCCCUCa..................................................... len:18 al:1
....................CGCAUCAUGUUUCCCUCUUUu.................................................. len:21 al:1
....................uGCAUCAUGUUUCCCUCUUU................................................... len:20 al:1
....................CGCAUCAUGUUUCCCUCUUUAUa................................................ len:23 al:1
....................CGCAUCAUGUUUCCCUCUU.................................................... len:19 al:2
....................CGuAUCAUGUUUCCCUCUUUAU................................................. len:22 al:1
....................CGCAUCAUGUUUCCCUCUUc................................................... len:20 al:4
....................CGCAUCAUGUUUCCCUCUUUA.................................................. len:21 al:11
....................CGCAUCAUGUUUCCCUCU..................................................... len:18 al:1
....................CGCAcCAUGUUUCCCUCUUUAU................................................. len:22 al:1
....................CGCAUCAUGUUUCCCUCUUUAU................................................. len:22 al:30
....................CGCAUCAUGUUcCCCUCUUUAU................................................. len:22 al:1
....................uGCAUCAUGUUUCCCUCUUUAU................................................. len:22 al:2
....................CGCAUCAUGUUUCCCUCcUU................................................... len:20 al:1
....................CGCAUCAUGUUUCCCUCUUUAUU................................................ len:23 al:7
....................aGCAUCAUGUUUCCCUCUUUAU................................................. len:22 al:1
....................CGCAUCAUGUUUCCCUCUUU................................................... len:20 al:4
....................CGCAUCAUGUUUCCCUCUUUAaU................................................ len:23 al:1
....................gGCAUCAUGUUUCCCUCUUUAU................................................. len:22 al:1
................................................UCAAGGAGGAAGCAUGAUACGc..................... len:22 al:2
................................................UCAAGGAGGAAGCAUGAUACGUu.................... len:23 al:1
................................................UCAAGGAGGAAGCAUGAUACGUA.................... len:23 al:3
................................................UCAAGGAGGAAGCAUGAUACGU..................... len:22 al:4
.................................................CAAGGAGGAAGCAUGAUAC....................... len:19 al:3
.................................................CAAGGAGGAAGCAUGAUACcU..................... len:21 al:3
.................................................CAAGGAGGAAGCAUGAc......................... len:17 al:1
.................................................CAAGGAGGAAGCAUGgUAC....................... len:19 al:2
.................................................CAAGGAGGAAGCAcGAUACGU..................... len:21 al:2
.................................................CAAGGAGGAAGCAUGAUACGg..................... len:21 al:2
.................................................CAAGGAGGAAGCAUGAUACGc..................... len:21 al:38
.................................................CAAGGAGGAAGCAUGAUACGUAA................... len:23 al:2
.................................................CAAGGAGGAAGCAUGAU......................... len:17 al:5
.................................................CAAGGAGGAAGCAUGAUACGUAu................... len:23 al:98
.................................................CAAGGAGGAAGCAUGAUACGUg.................... len:22 al:1
.................................................uAAGGAGGAAGCAUGAUACGUA.................... len:22 al:1
.................................................CAAGGAGGAAGCAUGAUACGUA.................... len:22 al:131
.................................................CAAGGAGGAAGCAUGAUA........................ len:18 al:4
.................................................CAAGGAGGAAGCAUGAUACGUu.................... len:22 al:9
.................................................CAAGGAGGAAGCAUGAUACGUAcA.................. len:24 al:1
.................................................CAAGGAGGAAGCAUGAgAC....................... len:19 al:1
.................................................CAAGGAGGAAGCAUGAUgCGUA.................... len:22 al:2
.................................................CAAGGAGGAAGCAUGAUACGUc.................... len:22 al:5
.................................................CAAGGAGGAAGCAUGAUACGU..................... len:21 al:102
.................................................uAAGGAGGAAGCAUGAUACGU..................... len:21 al:2
.................................................CAAGGAGGAAGCAUGAUACGUAc................... len:23 al:21
.................................................CAAGGAGGAAGCAUGAUACGUAg................... len:23 al:1
.................................................CAAGGAGGAAGCAcGAUACGUA.................... len:22 al:1
.................................................gAAGGAGGAAGCAUGAUACGU..................... len:21 al:1
.................................................CAgGGAGGAAGCAUGAUACGUA.................... len:22 al:1
.................................................CAAGGAGGAAGCAUGAUACGcA.................... len:22 al:3
.................................................CAAGGAGGAAGCAUGAUAuGUAA................... len:23 al:1
.................................................gAAGGAGGAAGCAUGAUACGUA.................... len:22 al:1
.................................................CAAGGAGGAAGCAUGAUACGUAuA.................. len:24 al:3
.................................................CAAGGAGGAAGCAUGAUACGa..................... len:21 al:4
..................................................AAGGAGGAAGCAUGAUACGUAu................... len:22 al:4
..................................................AAGGAGGAAGCAUGAUACGUA.................... len:21 al:2
..................................................AAGGAGGAAGCAUGAUACGUAA................... len:22 al:1
..................................................gAGGAGGAAGCAUGAUACGUA.................... len:21 al:1
..................................................AAGGAGGAAGCAUGAUACGU..................... len:20 al:2
...................................................AGGAGGAAGCAUGAUACGU..................... len:19 al:7
...................................................AGGAGGAAGCAUGAUACGcA.................... len:20 al:2
...................................................AGGAGGAAGCAUGAUACGUu.................... len:20 al:1
...................................................AGGAGGAAGCAUGAUACGUA.................... len:20 al:16
...................................................AGGAGGAAGCAUGAUAu....................... len:17 al:2
...................................................AGGAGGAAGCAUGAUACGUAA................... len:21 al:1
...................................................AGGAGGAAGCAUGAUACGUAu................... len:21 al:6