miRDeep2

.

Parameters used


miRDeep2 version2.0.1.2
Program call/home/shared/mirdeep2/bin/miRDeep2.pl /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/11.1-Apul-sRNAseq-miRdeep2-31bp-fastp-merged/collapsed_reads_gt17bp_mirdeep2.fasta /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic-no_spaces.fna /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/11.1-Apul-sRNAseq-miRdeep2-31bp-fastp-merged/Apul-mirdeep2-mapping.arf none /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/data/cnidarian-mirbase-mature-v22.1-no_spaces.fa none -t S.purpuratus -P -v -g -1
Reads/home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/11.1-Apul-sRNAseq-miRdeep2-31bp-fastp-merged/collapsed_reads_gt17bp_mirdeep2.fasta
Genome/home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic-no_spaces.fna
Mappings/home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/11.1-Apul-sRNAseq-miRdeep2-31bp-fastp-merged/Apul-mirdeep2-mapping.arf
Reference mature miRNAsnone
Other mature miRNAs/home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/data/cnidarian-mirbase-mature-v22.1-no_spaces.fa
SpeciesS.purpuratus
remove temporary filesyes


Survey of miRDeep2 performance for score cut-offs -10 to 10
miRDeep2 scorefor details on how the log-odds score is calculated, see Friedlander et al., Nature Biotechnology, 2008. estimated signal-to-noisefor the given score cut-off, the signal-to-noise ratio is estimated as r = total miRNA hairpins reported / mean estimated false positive miRNA hairpins over 100 rounds of permuted controls. excision gearingthis is the minimum read stack height required for excising a potential miRNA precursor from the genome in this analysis.
107.31
97.21
87.31
77.31
67.21
56.81
45.81
34.71
23.11
12.41
02.11
-11.61
-21.21
-311
-411
-511
-611
-711
-811
-911
-1011





novel miRNAs predicted by miRDeep2


provisional idthis is a provisional miRNA name assigned by miRDeep2. The first part of the id designates the chromosome or genome contig on which the miRNA gene is located. The second part is a running number that is added to avoid identical ids. The running number is incremented by one for each potential miRNA precursor that is excised from the genome. Clicking this field will display a pdf of the structure, read signature and score breakdown of the reported miRNA. miRDeep2 scorethe log-odds score assigned to the hairpin by miRDeep2 estimated probability that the miRNA candidate is a true positivethe estimated probability that a predicted novel miRNA with a score of this or higher is a true positive. To see exactly how this probability is estimated, mouse over the 'novel miRNAs, true positives' in the table at the top of the webpage. rfam alertthis field indicates if the predicted miRNA hairpin has sequence similarity to reference rRNAs or tRNAs. Warnings in this field should overrule the estimated probability that a reported miRNA is a true positive (previous field). total read countthis is the sum of read counts for the predicted mature, loop and star miRNAs. mature read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted mature miRNA, including 2 nts upstream and 5 nts downstream. loop read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted miRNA loop, including 2 nts upstream and 5 nts downstream. star read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted star miRNA, including 2 nts upstream and 5 nts downstream. significant randfold p-valuethis field indicates if the estimated randfold p-value of the excised potential miRNA hairpin is equal to or lower than 0.05 (see Bonnet et al., Bioinformatics, 2004). miRBase miRNAthis field displays the ids of any reference mature miRNAs for the species that map perfectly (full length, no mismatches) to the reported miRNA hairpin. If this is the case, the reported miRNA hairpin is assigned as a known miRNA. If not, it is assigned as a novel miRNA. If more than one reference mature miRNA maps to the miRNA hairpin, then only the id of the reference miRBase miRNA that matches the predicted mature sequence is output. example miRBase miRNA with the same seedthis field displays the ids of any reference mature miRNAs from related species that have a seed sequence identical to that of the reported mature miRNA. The seed is here defined as nucleotides 2-8 from the 5' end of the mature miRNA. If more than one reference mature miRNA have identical seed, then only the id of the miRNA that occurs last in the input file of reference mature miRNAs from related species is displayed. UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the consensus precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the consensus precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). consensus mature sequencethis is the consensus mature miRNA sequence as inferred from the deep sequencing reads. consensus star sequencethis is the consensus star miRNA sequence as inferred from the deep sequencing reads. consensus precursor sequencethis is the consensus precursor miRNA sequence as inferred from the deep sequencing reads. Note that this is the inferred Drosha hairpin product, and therefore does not include substantial flanking genomic sequence as does most miRBase precursors. precursor coordinateThe given precursor coordinates refer do absolute position in the mapped reference sequence
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_49320 1.2e+5 249134 248655 0 479 no nve-miR-9437_MIMAT0035398_Nematostella_vectensis_miR-9437 blat blast uuaacgaguagauaaaugaagaga cuucguuuauucacucguucaua cuucguuuauucacucguucauauuuauuauuaacgaguagauaaaugaagaga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20346247..20346301:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_208678 4.0e+4 79661 79121 0 540 no hsa-miR-4330_MIMAT0016924_Homo_sapiens_miR-4330 blat blast ucucagauuacaguaguuaagu cuuaacuacugcaaucugaacau ucucagauuacaguaguuaaguaauuaaauacuuaacuacugcaaucugaacau NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:11598966..11599020:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_123927 4.0e+4 79122 73935 0 5187 no bdi-miR7733-3p_MIMAT0030201_Brachypodium_distachyon_miR7733-3p blat blast ucugcguuaucggugaaauugu auuucacuagauaagcgcuaac auuucacuagauaagcgcuaacuguuauuguucugcguuaucggugaaauugu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:597846..597899:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_256047 3.9e+4 78001 65898 0 12103 no nve-miR-2023-3p_MIMAT0009756_Nematostella_vectensis_miR-2023-3p blat blast aaagaaguacaagugguaggg cugcuacuuggacuuuuuuca cugcuacuuggacuuuuuucacguuuaucgaugaaagaaguacaagugguaggg NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:8840769..8840823:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_123929 3.8e+4 75924 73935 0 1989 no bdi-miR7733-3p_MIMAT0030201_Brachypodium_distachyon_miR7733-3p blat blast ucugcguuaucggugaaauugu auuucacuagaugagcgcuaac auuucacuagaugagcgcuaacuguuauuguucugcguuaucggugaaauugu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:598142..598195:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_341478 2.5e+4 50316 49080 0 1236 no mtr-miR2651_MIMAT0013423_Medicago_truncatula_miR2651 blat blast auugauuguagacaagccucuga aggguauugucuaugaucaaaaa aggguauugucuaugaucaaaaauuuuauuauugauuguagacaagccucuga NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:11426819..11426872:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_406883 2.0e+4 39917 39897 0 20 no mmu-miR-7664-5p_MIMAT0029834_Mus_musculus_miR-7664-5p blat blast uaguuuacaggcucaacuuugcu ggaguugaucuuguaaac uaguuuacaggcucaacuuugcuuuaaagggaguugaucuuguaaac NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:15858707..15858754:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_81558 1.4e+4 28847 27971 0 876 no blat blast uaggcguauuuccgauugucc gacagccggaacuacgucugu uaggcguauuuccgauuguccuuuuacuacgacagccggaacuacgucugu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:21549048..21549099:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_459486 1.2e+4 25227 25162 0 65 no blat blast agugcacuuuucucaggaugaa cuucuugagaaaauuucaccca agugcacuuuucucaggaugaauugaauucuucuugagaaaauuucaccca NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:21629096..21629147:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_295614 1.2e+4 24755 24435 0 320 no tca-miR-11646-3p_MIMAT0045620_Tribolium_castaneum_miR-11646-3p blat blast ugggugucaucuauuauguuuu aacauaaaagauggcacc ugggugucaucuauuauguuuuugcuuguuaaaacauaaaagauggcacc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:19030617..19030667:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_318110 1.2e+4 24690 19570 0 5120 no oan-miR-33b-3p_MIMAT0009191_Ornithorhynchus_anatinus_miR-33b-3p blat blast uaauguucgcaacugccuuguu cauggcagcuaugaacaucacu cauggcagcuaugaacaucacuuuugagcaguaauguucgcaacugccuuguu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23262836..23262889:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_193634 7.8e+3 15327 15132 0 195 no nve-miR-2025-3p_MIMAT0009760_Nematostella_vectensis_miR-2025-3p blat blast auuuuuagcccgcggaaguugcg agcuuucgcgggauaaaaacuc agcuuucgcgggauaaaaacuccuucaugugaauuuuuagcccgcggaaguugcg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:21012167..21012222:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_114687 7.0e+3 13819 13816 0 3 no hsa-miR-33a-3p_MIMAT0004506_Homo_sapiens_miR-33a-3p blat blast caauguuucggcuuguucccg gguacaagccgaaacauugua caauguuucggcuuguucccguuuucggguacaagccgaaacauugua NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:26657249..26657297:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_85389 6.3e+3 12490 10356 0 2134 no blat blast augaucauagcacuuucuuugu aaagaaagugcucuaaucauaa aaagaaagugcucuaaucauaauguuguuaugaucauagcacuuucuuugu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:26890850..26890901:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_141384 5.8e+3 11506 11411 0 95 no Adi-Mir-Novel-5_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_NA blat blast caagugagagaagguuagugugg acgcuaaccugcuuucacuucca acgcuaaccugcuuucacuuccauuuaaugcaagugagagaagguuagugugg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:3756521..3756574:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_348474 5.3e+3 10440 8224 0 2216 no nve-miR-2030-5p_MIMAT0009780_Nematostella_vectensis_miR-2030-5p blat blast uagcauaacauuguaagagaucu ucucuuacauuguugugcugcc uagcauaacauuguaagagaucuuuaaaggucucuuacauuguugugcugcc NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:2966522..2966574:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_107317 4.3e+3 8519 8506 0 13 no gma-miR4352b_MIMAT0018276_Glycine_max_miR4352b blat blast aaaaaugucgguugcuuaagcu cucaagcacacgacguuuuuga aaaaaugucgguugcuuaagcucucuaauaguaagcucaagcacacgacguuuuuga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:16118234..16118291:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_43162 4.2e+3 8238 8064 0 174 no ath-miR831-3p_MIMAT0004249_Arabidopsis_thaliana_miR831-3p blat blast ugaucucugcaauagccugccuc ggagguuagugcagaggucauc ggagguuagugcagaggucaucguuauugaugaucucugcaauagccugccuc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:12757145..12757198:-
NW_025323232.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000683_whole_genome_shotgun_sequence_758965 4.1e+3 8138 5822 2 2314 no blat blast uggauuaaaaaauguacugcguuca aguguucgcauuugaugauuuuggaugu uggauuaaaaaauguacugcguucaagaucgacguuuucuuucucggcucuuuuugaguguucgcauuugaugauuuuggaugu NW_025323232.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000683_whole_genome_shotgun_sequence:16128..16212:-
NW_025323148.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000591_whole_genome_shotgun_sequence_747324 4.1e+3 8138 5822 2 2314 no blat blast uggauuaaaaaauguacugcguuca aguguucgcauuugaugauuuuggaugu uggauuaaaaaauguacugcguucaagaucgacguuuucuuucucggcucuuuuugaguguucgcauuugaugauuuuggaugu NW_025323148.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000591_whole_genome_shotgun_sequence:10965..11049:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_269853 4.1e+3 8138 5822 2 2314 no blat blast uggauuaaaaaauguacugcguuca aguguucgcauuugaugauuuuggaugu uggauuaaaaaauguacugcguucaagaucgacguuuucuuucucggcucuuuuugaguguucgcauuugaugauuuuggaugu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:8735429..8735513:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_243919 3.9e+3 7764 5659 0 2105 no dre-miR-301b-5p_MIMAT0031990_Danio_rerio_miR-301b-5p blat blast ucuuugacaaacucccaaauugu auguggggauuugucaaaccu ucuuugacaaacucccaaauuguauuuaaugcaauguggggauuugucaaaccu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:24694681..24694735:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_443088 3.8e+3 7482 6448 0 1034 no blat blast uacaugugcugcacuggaacucu cauuccauggcagcugugugcg uacaugugcugcacuggaacucuuuugcaagacauuccauggcagcugugugcg NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:2892675..2892729:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_489692 3.5e+3 7024 7023 0 1 no aca-miR-5467_MIMAT0022100_Anolis_carolinensis_miR-5467 blat blast uucccaugaacuuaacuacagaua guuuguaguuauacccaugggau uucccaugaacuuaacuacagauacuucaaaaccaugguuuguaguuauacccaugggau NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:13653261..13653321:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_279046 3.4e+3 6683 6658 0 25 no pgi-miR6136a.1_MIMAT0027253_Panax_ginseng_miR6136a.1 blat blast uagacgacagauuuuugau uauaaagucugacggaaaguuc uagacgacagauuuuugauagcacauauaaagucugacggaaaguuc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:1018012..1018059:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_84764 2.7e+3 5429 5380 0 49 no hsa-miR-607_MIMAT0003275_Homo_sapiens_miR-607 blat blast uuucaaauuaggaagggagauguu caccgcucugcuaauuuga uuucaaauuaggaagggagauguuuuacugaacaccgcucugcuaauuuga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:25838852..25838903:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_237986 2.7e+3 5329 5316 0 13 no blat blast uaugauccucgcacuugcugga ugcagugcgguguuugaaauc ugcagugcgguguuugaaaucaaaugaagauaugauccucgcacuugcugga NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:16536261..16536313:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_226769 2.3e+3 4551 4497 0 54 no nve-miR-9416_MIMAT0035372_Nematostella_vectensis_miR-9416 blat blast aagaacacccaaaauagcugagga cugcuauauugaguguucuaac aagaacacccaaaauagcugaggauuuuguuuccugcuauauugaguguucuaac NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:2184975..2185030:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_502316 2.2e+3 4469 4468 0 1 no aga-miR-2b-5p_MIMAT0041564_Anopheles_gambiae_miR-2b-5p blat blast ucucaaaguuggauguguc uaaucagauauuuugaaaag uaaucagauauuuugaaaagcucucaaaguuggauguguc NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:7790339..7790379:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_281071 1.9e+3 3895 3892 0 3 no mdo-miR-7344-3p_MIMAT0028699_Monodelphis_domestica_miR-7344-3p blat blast cuacucagaauucgcggugucgac uucgccgugguuccaauuuugaccuucau uucgccgugguuccaauuuugaccuucaucuacucagaauucgcggugucgac NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:4155994..4156047:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_167435 1.4e+3 2844 2840 0 4 no nve-miR-2037-3p_MIMAT0009797_Nematostella_vectensis_miR-2037-3p blat blast ugugauuggagacuuuuaucgu ugguggaaguccucaaucacccu ugguggaaguccucaaucacccucuuuacgcagugugauuggagacuuuuaucgu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:17025594..17025649:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_221839 1.4e+3 2786 2711 0 75 no sbi-miR5388_MIMAT0021686_Sorghum_bicolor_miR5388 blat blast uucuuugcacuguucaaacccu uguuugaacaguccaaguagc uguuugaacaguccaaguagcaguuauuguucuuugcacuguucaaacccu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:26873997..26874048:+
NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence_578855 1.0e+3 2141 2130 0 11 no lja-miR11155e-5p_MIMAT0043994_Lotus_japonicus_miR11155e-5p blat blast auuguaagcagcugugcggaggaau uucuuggacgcaguggagaaauc uucuuggacgcaguggagaaaucauugucguagacgacauuguaagcagcugugcggaggaau NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence:564470..564533:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_158036 1.0e+3 2005 2004 0 1 no blat blast uuaccacauucaggauagaca cucuagccugaaugagguaaua uuaccacauucaggauagacauguucuaucucuagccugaaugagguaaua NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:5591602..5591653:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_99544 9.5e+2 1872 1703 0 169 no hma-miR-2022_MIMAT0009720_Hydra_magnipapillata_miR-2022 blat blast uuugcuaguugcuuuugucccgu uggacaaaggcuccaagcaaaug uggacaaaggcuccaagcaaauguuuaucauuugcuaguugcuuuugucccgu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5656213..5656266:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_99560 9.5e+2 1867 1703 0 164 no hma-miR-2022_MIMAT0009720_Hydra_magnipapillata_miR-2022 blat blast uuugcuaguugcuuuugucccgu uggacaaaggcuccaaggaaaug uggacaaaggcuccaaggaaauguuuaucauuugcuaguugcuuuugucccgu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5668124..5668177:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_99586 9.5e+2 1867 1703 0 164 no hma-miR-2022_MIMAT0009720_Hydra_magnipapillata_miR-2022 blat blast uuugcuaguugcuuuugucccgu uggacaaaggcuccaaggaaaug uggacaaaggcuccaaggaaauguuuaucauuugcuaguugcuuuugucccgu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5690764..5690817:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_344920 9.2e+2 1817 1783 0 34 no nve-miR-2036-3p_MIMAT0009795_Nematostella_vectensis_miR-2036-3p blat blast uauauuguacgacucucaucgugu cggugaaagucgcuucaauacaca cggugaaagucgcuucaauacacauuugauguauauuguacgacucucaucgugu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:15996877..15996932:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_158038 9.1e+2 1805 1626 0 179 no blat blast uuaccacauucaggauagaca aucuagccugaaugugguaau uuaccacauucaggauagacaaguuauauaucuagccugaaugugguaau NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:5591759..5591809:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_434762 6.5e+2 1283 1282 0 1 no mse-miR-2779_MIMAT0024425_Manduca_sexta_miR-2779 blat blast auccggcucgaaggacca uucuuuuuggccauuauccuuu uucuuuuuggccauuauccuuuagauccggcucgaaggacca NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:9558789..9558831:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_328215 6.3e+2 1247 1209 0 38 no gga-miR-6677-5p_MIMAT0025780_Gallus_gallus_miR-6677-5p blat blast cucacugcuuaaaagagucacu uggcucuuuuaaguaguugaaua uggcucuuuuaaguaguugaauaauuaaauuuacucacugcuuaaaagagucacu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:11856140..11856195:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_123035 5.6e+2 1124 1116 7 1 no hpo-miR-10046-5p_MIMAT0040614_Heligmosomoides_polygyrus_miR-10046-5p blat blast gucccgucggaggugcca uucccuucucaacgaugucuuuagccuu uucccuucucaacgaugucuuuagccuuguuuugcucgaauuccagaaguugaagcuucguguauccauucucgugaucccguuagucccgucggaggugcca NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:36902601..36902704:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_489676 4.9e+2 965 685 0 280 no nve-miR-2040b-3p_MIMAT0009809_Nematostella_vectensis_miR-2040b-3p blat blast uucgucucuuguauuuuccugg acgaaaauacaagugacuggug uucgucucuuguauuuuccugguauauaccacgaaaauacaagugacuggug NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:13646563..13646615:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_395145 4.6e+2 914 718 0 196 no dre-miR-430c-5p_MIMAT0031929_Danio_rerio_miR-430c-5p blat blast aacuucaauucauggcccucau cccaggucauaaauugaaguaga aacuucaauucauggcccucaugcuuugcacccaggucauaaauugaaguaga NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:221375..221428:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_300399 4.4e+2 886 885 0 1 no blat blast aaugccgaguuuaugauuuuc aaauccuugucaacgucgccu aaugccgaguuuaugauuuucuuucuuguauuggucauagcaccuucuuuggaggaaauccuugucaacgucgccu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:1228756..1228832:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_423809 3.6e+2 718 670 0 48 no ssp-miR1432_MIMAT0020290_Saccharum_sp._miR1432 blat blast aucaggaaaagagccucugcu agaggcucuuuuccugaugu agaggcucuuuuccugauguucgcugacaucaggaaaagagccucugcu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:13070438..13070487:+
NW_025322653.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000146_whole_genome_shotgun_sequence_627632 3.4e+2 688 656 0 32 no blat blast uacccggauucuccacca ugcgagaaguaccgggauc ugcgagaaguaccgggaucgguacccggauucuccacca NW_025322653.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000146_whole_genome_shotgun_sequence:363210..363249:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_14067 3.1e+2 623 617 0 6 no bmo-miR-3322_MIMAT0015509_Bombyx_mori_miR-3322 blat blast gcucgucgggucuacuugaaugu aauucaacauggcagaggcg aauucaacauggcagaggcgagguuaaagcucgucgggucuacuugaaugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:17261929..17261980:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_512504 3.1e+2 625 619 0 6 no bmo-miR-3322_MIMAT0015509_Bombyx_mori_miR-3322 blat blast gcucgucgggucuacuugaaugu aauucaacauggcagaggcg aauucaacauggcagaggcgaggucacagcucgucgggucuacuugaaugu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:22082899..22082950:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_255760 3.0e+2 592 588 0 4 no mmu-miR-6903-5p_MIMAT0027706_Mus_musculus_miR-6903-5p blat blast uugggaaagggaaguuacu uuagguuccuuuuuucauga uugggaaagggaaguuacuccccuuuaugggguuuagguuccuuuuuucauga NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:8405241..8405294:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_514889 2.9e+2 579 505 0 74 no hsa-miR-3173-3p_MIMAT0015048_Homo_sapiens_miR-3173-3p blat blast caaggaggaagcaugauacgua cgcaucauguuucccucuuuau cgcaucauguuucccucuuuauuuuaaaucaaggaggaagcaugauacgua NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:2370955..2371006:+
NW_025322615.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000015_whole_genome_shotgun_sequence_547766 2.6e+2 532 527 0 5 no avi-miR-temp-13_Anemonia_viridis_Urbarova_et_al._2018_NA blat blast uuacugaacagacgcacggc uuuugacguccucugugau uuuugacguccucugugauguauuacugaacagacgcacggc NW_025322615.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000015_whole_genome_shotgun_sequence:967410..967452:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_94158 2.5e+2 501 499 0 2 no gma-miR1520f-5p_MIMAT0032111_Glycine_max_miR1520f-5p blat blast auugucacguguguuuucaga cugaaaacacgcgugauauu auugucacguguguuuucagaaguugguucugaaaacacgcgugauauu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:35889580..35889629:+
NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence_583628 2.5e+2 499 496 0 3 no asu-miR-2b-5p_MIMAT0021427_Ascaris_suum_miR-2b-5p blat blast ugcuuaauuccggaaacagaucc ucgcuguuucugcaacaaacauggaau ugcuuaauuccggaaacagaucccgcaaacucgcuguuucugcaacaaacauggaau NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence:288390..288447:+
NW_025322681.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000192_whole_genome_shotgun_sequence_649426 2.5e+2 495 378 0 117 no blat blast ccgaaacagugggugcucu agcacugcacugaugaggcc agcacugcacugaugaggcccagaaggccgaaacagugggugcucu NW_025322681.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000192_whole_genome_shotgun_sequence:98155..98201:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_373046 2.2e+2 439 438 0 1 no ebv-miR-BART15_MIMAT0003713_Epstein_Barr_miR-BART15 blat blast gucaguggcuucauagcuc guuagaacgucgcgccgguaucg gucaguggcuucauagcucaauugguuagaacgucgcgccgguaucg NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:13509545..13509592:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_152302 2.1e+2 414 412 0 2 no osa-miR5499_MIMAT0022132_Oryza_sativa_miR5499 blat blast aaaggaagaaaggagacccugg agggucucucuucuucccuuucc agggucucucuucuucccuuucccuggugagaggaaaggaagaaaggagacccugg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:17539511..17539567:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_155016 2.0e+2 393 228 0 165 no bdi-miR7726b-5p_MIMAT0030218_Brachypodium_distachyon_miR7726b-5p blat blast auugaugagcacaacaaaaggu uuuuugugauguucgucaauau auugaugagcacaacaaaaggucuaugggcacuuuuugugauguucgucaauau NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:1868155..1868209:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_404640 1.8e+2 371 370 0 1 no blat blast ucacuucuuugauucaacucga ccaguugaaucaaacaaguuaca ccaguugaaucaaacaaguuacaagucuugucacuucuuugauucaacucga NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:12768294..12768346:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_28567 1.8e+2 356 355 0 1 no blat blast uacucgcccgauuacucccugaau uucagggaguaaucgggcuca uucagggaguaaucgggcucauaauuucaaaucaaaauuacucgcccgauuacucccugaau NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:32342988..32343050:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_500792 1.7e+2 346 210 0 136 no mmu-miR-669a-3p_MIMAT0017243_Mus_musculus_miR-669a-3p blat blast ucauaacagugaggaccauucu aaugaucccugcucuuaugaau aaugaucccugcucuuaugaauguaauuagguucauaacagugaggaccauucu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:5700442..5700496:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_390473 1.7e+2 332 317 0 15 no mtr-miR2651_MIMAT0013423_Medicago_truncatula_miR2651 blat blast uuugauugcugugaucugguua accagaccccugcaaucaaaga accagaccccugcaaucaaagagcuuuuugucuuugauugcugugaucugguua NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:15908490..15908544:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_512314 1.4e+2 274 250 0 24 no zma-miR393b-3p_MIMAT0015334_Zea_mays_miR393b-3p blat blast uucaaugcaaaacaagucagaua uuaacuuguuuugcauuguauc uuaacuuguuuugcauuguaucuuaaagauucaaugcaaaacaagucagaua NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:21684346..21684398:-
NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence_555862 1.3e+2 265 247 0 18 no bfl-miR-2065_MIMAT0009993_Branchiostoma_floridae_miR-2065 blat blast aggcagagaagagagacccugg agggucucucuucucugccucc agggucucucuucucugccuccauugucguugagaauggaggcagagaagagagacccugg NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence:606109..606170:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_152300 1.3e+2 264 190 0 74 no blat blast uuguucaaguucuuuucaugaug aaugaaaaacacuugaauuaaua aaugaaaaacacuugaauuaauauuaauaauuguucaaguucuuuucaugaug NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:17538449..17538502:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_536725 1.2e+2 239 229 0 10 no gma-miR1516a-3p_MIMAT0007375_Glycine_max_miR1516a-3p blat blast aaaaagagcuugaagacuucacu uguaguuuucaaucucuuuuu aaaaagagcuugaagacuucacuuuaaaaguguaguuuucaaucucuuuuu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:8205220..8205271:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_415405 1.1e+2 227 225 0 2 no hsa-miR-4282_MIMAT0016912_Homo_sapiens_miR-4282 blat blast aaaaauuucguuucagggccac ccuaugaagcgaaauuuuuuau ccuaugaagcgaaauuuuuuauuagauauuaaaaaauuucguuucagggccac NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:3632972..3633025:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_177636 1.1e+2 231 221 0 10 no dme-miR-9c-3p_MIMAT0020828_Drosophila_melanogaster_miR-9c-3p blat blast uaaagcuuuugugaagaaacacg uguuuuuucguaacagcuucaua uguuuuuucguaacagcuucauaaauugaauuauaaagcuuuugugaagaaacacg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:2018510..2018566:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_99041 1.1e+2 220 218 0 2 no dre-miR-430c-5p_MIMAT0031929_Danio_rerio_miR-430c-5p blat blast aacuucaauucauggcccuc caggucauaaauugaagu aacuucaauucauggcccucccuugggguuugcacucaggucauaaauugaagu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:4924016..4924070:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_319162 1.0e+2 204 203 0 1 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg aguugacuaucgcucguau uacgagcagauagucaacgaggcgcagccgaguugacuaucgcucguau NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:514488..514537:+
NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence_604624 9.9e+1 193 110 0 83 no ppt-miR408b_MIMAT0005050_Physcomitrella_patens_miR408b blat blast agcacugcacugaugaggcc ccgaaacaguacugucugcagu agcacugcacugaugaggcccagauggccgaaacaguacugucugcagu NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence:143391..143440:-
NW_025322876.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000225_whole_genome_shotgun_sequence_714776 9.8e+1 191 184 6 1 no bta-miR-2471-5p_MIMAT0012061_Bos_taurus_miR-2471-5p blat blast aaggaucuugccgcaaaucu cacguguggaggaucuuugcaa cacguguggaggaucuuugcaaguuucguucaaauuuuguccuaaaugcggcaaggaucuugccgcaaaucu NW_025322876.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000225_whole_genome_shotgun_sequence:42196..42268:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_516747 9.7e+1 185 178 0 7 no mmu-miR-3069-3p_MIMAT0014845_Mus_musculus_miR-3069-3p blat blast uuggacaccuguaauuggaua uccaauuacagcuguccaauu uccaauuacagcuguccaauuugaacuuuuuguaauuggacaccuguaauuggaua NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:5232143..5232199:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_516787 9.7e+1 185 178 0 7 no mmu-miR-3069-3p_MIMAT0014845_Mus_musculus_miR-3069-3p blat blast uuggacaccuguaauuggaua uccaauuacagcuguccaauu uccaauuacagcuguccaauuugaacuuuuuguaauuggacaccuguaauuggaua NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:5261407..5261463:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_159152 9.4e+1 183 181 0 2 no gma-miR5677_MIMAT0022465_Glycine_max_miR5677 blat blast auuggucuguuggauuguucauc acgaacgaacuaacugcccaaacc auuggucuguuggauuguucaucuuuaacagacgaacgaacuaacugcccaaacc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:7179530..7179585:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260821 9.2e+1 176 104 0 72 no mdo-miR-200b-5p_MIMAT0026700_Monodelphis_domestica_miR-200b-5p blat blast uucuuacucccucucguaccauc cgguacgagaggaaauauagaagu cgguacgagaggaaauauagaaguuuuagauuucuuacucccucucguaccauc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15835505..15835559:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_100472 9.0e+1 180 168 0 12 no blat blast uuccuauuccauucuuguucucc caacaagaauacaauaggaau caacaagaauacaauaggaauaauucuuaauuccuauuccauucuuguucucc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:7271265..7271318:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_387253 8.9e+1 170 53 0 117 no hsa-miR-486-5p_MIMAT0002177_Homo_sapiens_miR-486-5p blat blast cccuguacaguuugauaucuu gauaucaaacugugcaggagu cccuguacaguuugauaucuucaaguuaaguacgauaucaaacugugcaggagu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:11070345..11070399:+
NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence_584264 8.5e+1 174 173 0 1 no fhe-miR-750_MIMAT0045204_Fasciola_hepatica_miR-750 blat blast uccagaucuagcuuuacccu gugugauuuguuagucugu uccagaucuagcuuuacccuaaaguuguugcgaagagugugauuuguuagucugu NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence:1305480..1305535:+
NW_025322629.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000089_whole_genome_shotgun_sequence_595495 8.4e+1 166 140 25 1 no blat blast ugcgaucgcaacuuauaacuug aacuuauaacuugcgaucgca aacuuauaacuugcgaucgcagguuauaacuugcgaucgcaacuuauaacuugugaucgcaacuuauaacuugcgaucgcaacuuauaacuug NW_025322629.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000089_whole_genome_shotgun_sequence:1061819..1061912:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_520342 8.2e+1 161 158 0 3 no blat blast aaauauucagggcuucagcgggg uccguugaagcccugaauuuuuc aaauauucagggcuucagcgggguugaagcuccguugaagcccugaauuuuuc NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:9161580..9161633:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260816 8.1e+1 162 152 0 10 no blat blast aguacgagaggaaauauagaagu uucuuacucccucucguacuau aguacgagaggaaauauagaaguuuuagauuucuuacucccucucguacuau NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15834801..15834853:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_249036 8.1e+1 162 161 0 1 no blat blast ucaugggcuauugacucgu gagucaguagcccauucggc gagucaguagcccauucggccuucgaccucaugggcuauugacucgu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:30599712..30599759:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_16631 7.8e+1 148 139 0 9 no cja-miR-9948b_MIMAT0039722_Callithrix_jacchus_miR-9948b blat blast acgcuaggaagggaugccggga acggcaccccuugcuggaguua acggcaccccuugcuggaguuauuuaauaacgcuaggaagggaugccggga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20088649..20088700:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_158320 7.4e+1 139 126 0 13 no dme-miR-2501-5p_MIMAT0012216_Drosophila_melanogaster_miR-2501-5p blat blast uuaaguuuuugacuauuggauu ccaauagucgaaaacuuaacc ccaauagucgaaaacuuaaccuuguuaggaggguuaaguuuuugacuauuggauu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:5897262..5897317:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_66778 7.3e+1 141 139 0 2 no mml-miR-627-3p_MIMAT0006473_Macaca_mulatta_miR-627-3p blat blast accucuuuggccucuaguucuua agaauuagaugcuaaggaaauuga accucuuuggccucuaguucuuaauuauuaagaauuagaugcuaaggaaauuga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:38933457..38933511:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_237038 7.3e+1 141 117 0 24 no ppt-miR408b_MIMAT0005050_Physcomitrella_patens_miR408b blat blast agcacugcacugaugaggcc ccgaaacaguaagcgcucuagu agcacugcacugaugaggcccagaaggccgaaacaguaagcgcucuagu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:16029371..16029420:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_234536 6.8e+1 135 133 0 2 no blat blast ucguugacuaucugcucguagaa ucuacgagcgauagucaacucgg ucuacgagcgauagucaacucggcugcuccucguugacuaucugcucguagaa NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:12237063..12237116:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_85610 6.5e+1 124 103 0 21 no mmu-miR-409-3p_MIMAT0001090_Mus_musculus_miR-409-3p blat blast caauguuggagacacugguaggu ugcaccagcaucaccaauauugug caauguuggagacacugguagguuuaauacugcaccagcaucaccaauauugug NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:27077024..27077078:+
NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence_617550 6.2e+1 121 97 0 24 no ppt-miR408b_MIMAT0005050_Physcomitrella_patens_miR408b blat blast agcacugcacugaugaggcc ccgaaacaguaagcgcucuagu agcacugcacugaugaggccccgaaggccgaaacaguaagcgcucuagu NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence:139140..139189:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_152422 6.1e+1 114 108 0 6 no tgu-miR-21-3p_MIMAT0014636_Taeniopygia_guttata_miR-21-3p blat blast aacaacagcuauauggaccuaac agguucauauagcuguugcauu agguucauauagcuguugcauucaaucuuaaacaacagcuauauggaccuaac NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:17703225..17703278:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_348889 5.7e+1 107 68 0 39 no dme-miR-1012-3p_MIMAT0005025_Drosophila_melanogaster_miR-1012-3p blat blast uuagucaaggacaucguucucau cagaacgauguccuugacua uuagucaaggacaucguucucauauaaaucagaacgauguccuugacua NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:3468894..3468943:+
NW_025322864.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000213_whole_genome_shotgun_sequence_712988 5.6e+1 105 101 0 4 no esi-miR3468-3p_MIMAT0017790_Ectocarpus_siliculosus_miR3468-3p blat blast uucuuuucucuucuaauucacc gaguuagaggagaggagaguau gaguuagaggagaggagaguauuauuuuuaauauucuuuucucuucuaauucacc NW_025322864.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000213_whole_genome_shotgun_sequence:108304..108359:-
NW_025322763.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000033_whole_genome_shotgun_sequence_671991 5.6e+1 105 101 0 4 no esi-miR3468-3p_MIMAT0017790_Ectocarpus_siliculosus_miR3468-3p blat blast uucuuuucucuucuaauucacc gaguuagaggagaggagaguau gaguuagaggagaggagaguauuauuuuuaauauucuuuucucuucuaauucacc NW_025322763.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000033_whole_genome_shotgun_sequence:796123..796178:+
NW_025322623.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000066_whole_genome_shotgun_sequence_582563 5.5e+1 110 89 0 21 no blat blast aauuucgucucuucguuuuaucu auauaacgaagagacaaaauauucu auauaacgaagagacaaaauauucuguucagagaauuucgucucuucguuuuaucu NW_025322623.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000066_whole_genome_shotgun_sequence:271518..271574:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_528683 5.1e+1 97 95 0 2 no dre-miR-737-5p_MIMAT0032013_Danio_rerio_miR-737-5p blat blast auuuuuuucuacucuacaguga cuguaaaguagaaaaaaauuca cuguaaaguagaaaaaaauucaguuauagaauuuuuuucuacucuacaguga NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:16206606..16206658:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260814 5.0e+1 96 57 0 39 no mdo-miR-200b-5p_MIMAT0026700_Monodelphis_domestica_miR-200b-5p blat blast uucuuacucccucucauaccauu aguaugagaggaaauauagaagu aguaugagaggaaauauagaaguuuuagauuucuuacucccucucauaccauu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15834348..15834401:+
NW_025322865.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000214_whole_genome_shotgun_sequence_713088 5.0e+1 98 53 44 1 no cel-miR-56-5p_MIMAT0000027_Caenorhabditis_elegans_miR-56-5p blat blast uggcggauuuuguaccacgug ugguucaagucucuuuguu ugguucaagucucuuuguuuugcugucccagugcgggaauaauaaugagcuugcccuucagcauggcggauuuuguaccacgug NW_025322865.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000214_whole_genome_shotgun_sequence:64176..64260:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_85257 4.8e+1 90 72 0 18 no hsa-miR-33a-3p_MIMAT0004506_Homo_sapiens_miR-33a-3p blat blast caauguuucggcuuguacccga ggaacaagccgaaacauu caauguuucggcuuguacccgaaaacgggaacaagccgaaacauu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:26657251..26657296:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_115437 4.6e+1 86 84 0 2 no bmo-miR-3409_MIMAT0015615_Bombyx_mori_miR-3409 blat blast ugaacaaguccauaaggaagaacu uaugccuuauugacuaguucauuu ugaacaaguccauaaggaagaacuuaaaguuaugccuuauugacuaguucauuu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:27848311..27848365:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_299173 4.6e+1 84 81 0 3 no rno-miR-185-3p_MIMAT0017142_Rattus_norvegicus_miR-185-3p blat blast uuuccucuuccggacuuaccuag agauaagucgggaagagga agauaagucgggaagaggaaagaacaggucuuuccucuuccggacuuaccuag NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:24040223..24040276:+
NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence_555705 4.4e+1 83 82 0 1 no ppt-miR408b_MIMAT0005050_Physcomitrella_patens_miR408b blat blast agcacugcacugaugaggcu ccgaaacaguaaagugcu agcacugcacugaugaggcucagaaggccgaaacaguaaagugcu NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence:168079..168124:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_103691 4.4e+1 80 66 0 14 no hsa-miR-382-5p_MIMAT0000737_Homo_sapiens_miR-382-5p blat blast aaaguuguuggaugaaguuuga aaacuucauccaacaacuucca aaaguuguuggaugaaguuugaagcuggucaaacuucauccaacaacuucca NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:12323038..12323090:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_64888 4.0e+1 72 71 0 1 no mdo-miR-7262k-3p_MIMAT0050212_Monodelphis_domestica_miR-7262k-3p blat blast guaaaaugagcuguaugacaca ugucauacagcccauuuuacaa ugucauacagcccauuuuacaauaaugauauuuguaaaaugagcuguaugacaca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:35990615..35990670:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_364993 3.8e+1 68 64 0 4 no dme-miR-1012-3p_MIMAT0005025_Drosophila_melanogaster_miR-1012-3p blat blast uuagucaaggacaucguucugauu gagaacgauguccuugacuaacgac uuagucaaggacaucguucugauuuauaugagaacgauguccuugacuaacgac NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:3468890..3468944:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_170835 3.7e+1 66 43 0 23 no Adi-Mir-Novel-11_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_NA blat blast ucaugguaauugucugcauuu augcagacaauuaccaugacaac augcagacaauuaccaugacaacuuaaaaguugucaugguaauugucugcauuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:22298998..22299052:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_194394 3.7e+1 66 43 0 23 no Adi-Mir-Novel-11_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_NA blat blast ucaugguaauugucugcauuu augcagacaauuaccaugacaac augcagacaauuaccaugacaacuuuuaaguugucaugguaauugucugcauuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:22298996..22299050:-
NW_025322901.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000251_whole_genome_shotgun_sequence_718891 3.5e+1 64 63 0 1 no sko-miR-4831_MIMAT0020045_Saccoglossus_kowalevskii_miR-4831 blat blast uucggcaaauaauugaucuucu cagaucaauuauuugccucagc cagaucaauuauuugccucagccuucggcuucggcaaauaauugaucuucu NW_025322901.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000251_whole_genome_shotgun_sequence:46890..46941:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_464192 3.5e+1 63 62 0 1 no dre-miR-2188-3p_MIMAT0011310_Danio_rerio_miR-2188-3p blat blast uugugugagaaaguauuuuugg uaaaaacacuuucucacacaaug uaaaaacacuuucucacacaaugaauuucauugugugagaaaguauuuuugg NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:4462080..4462132:-
NW_025322863.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000212_whole_genome_shotgun_sequence_712658 3.4e+1 69 67 0 2 no blat blast gugucucgaaaacucagacc cugaguuuucgagacaccc cugaguuuucgagacacccaagggggugucucgaaaacucagacc NW_025322863.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000212_whole_genome_shotgun_sequence:89518..89563:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_203508 3.4e+1 69 67 0 2 no blat blast gugucucgaaaacucagacc cugaguuuucgagacaccc cugaguuuucgagacacccaagggggugucucgaaaacucagacc NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:5537237..5537282:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_75184 3.4e+1 69 67 0 2 no blat blast gugucucgaaaacucagacc cugaguuuucgagacaccc cugaguuuucgagacacccaagggggugucucgaaaacucagacc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:12748774..12748819:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_277664 3.3e+1 68 59 0 9 no blat blast aaaaauucuagaaccauacaccu aaguaugguucucgaauuuugu aaguaugguucucgaauuuuguaauuauuaaaaaauucuagaaccauacaccu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:19495906..19495959:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_142074 3.2e+1 57 56 0 1 no hsa-miR-4513_MIMAT0019050_Homo_sapiens_miR-4513 blat blast ugacugacguuuugacaaccugggu acagguuguugaaacgucag ugacugacguuuugacaaccuggguggaagccacuuucagagucaagugucggaaucaagucuugacucagaagauggcuucugcacagguuguugaaacgucag NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:4763493..4763598:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_161381 3.0e+1 63 62 0 1 no blat blast cacggaucaauagcccauucgg ucaucggcuauugacccguagc cacggaucaauagcccauucggcuucaccucaucggcuauugacccguagc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:9944294..9944345:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_484050 3.0e+1 53 37 0 16 no hsa-miR-6790-3p_MIMAT0027481_Homo_sapiens_miR-6790-3p blat blast agaccucgggcacaguuuuucc gaaaacugugcccucugucuug gaaaacugugcccucugucuugaguacggcucucggucugcggccuugcaccguacuuaagaccucgggcacaguuuuucc NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:6524469..6524550:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_30304 3.0e+1 54 53 0 1 no hsa-miR-890_MIMAT0004912_Homo_sapiens_miR-890 blat blast uacuuggacagagggaaacccu aguuacccucccuccaugu uacuuggacagagggaaacccuccuagaagaguuacccucccuccaugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:34891202..34891251:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17327 2.7e+1 47 46 0 1 no stu-miR5303f_MIMAT0030904_Solanum_tuberosum_miR5303f blat blast uuuuuuggcagagaggaacuuca agguuucucuuugccaac agguuucucuuugccaacaaauaacauuguaauuuuuuggcagagaggaacuuca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20362391..20362446:+
NW_025322774.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000084_whole_genome_shotgun_sequence_683812 2.6e+1 47 45 0 2 no aly-miR400-3p_MIMAT0017584_Arabidopsis_lyrata_miR400-3p blat blast uacuuauaaguuuugaugggaa uccaucaaaaguuauaauu uccaucaaaaguuauaauuagauaucagucuacuuauaaguuuugaugggaa NW_025322774.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000084_whole_genome_shotgun_sequence:297382..297434:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260820 2.6e+1 48 39 0 9 no cel-miR-4815_MIMAT0020004_Caenorhabditis_elegans_miR-4815 blat blast aguaugagaggaaauauagaagu uucuuacucccucucauaccau aguaugagaggaaauauagaaguuuuagauuucuuacucccucucauaccau NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15835233..15835285:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_147205 2.6e+1 48 47 0 1 no efu-miR-9339_MIMAT0035103_Eptesicus_fuscus_miR-9339 blat blast aagauugaaauggcgcgcgacu ucuguguuguuuuguucugu aagauugaaauggcgcgcgacuggcuuggacgcaucuguguuguuuuguucugu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:11705365..11705419:-
NW_025322764.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000036_whole_genome_shotgun_sequence_673562 2.5e+1 45 29 0 16 no sbi-miR5565d_MIMAT0022254_Sorghum_bicolor_miR5565d blat blast acuucaauucauggcccucgug cucaggccaugaauugaagcgg acuucaauucauggcccucgugcuucacacucaggccaugaauugaagcgg NW_025322764.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000036_whole_genome_shotgun_sequence:551461..551512:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_196227 2.4e+1 54 48 0 6 no blat blast ccggucuuaguuuucguacua uacgaaaacuaagaccuaaga uacgaaaacuaagaccuaagaccuaagacccggucuuaguuuucguacua NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24598165..24598215:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_141124 2.4e+1 41 39 0 2 no hsa-miR-3181_MIMAT0015061_Homo_sapiens_miR-3181 blat blast uucgggccgcaaaugacacuacg uagugucauuugcggcccucgc uagugucauuugcggcccucgcgcuucgcguucgggccgcaaaugacacuacg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:3357526..3357579:-
NW_025323127.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000569_whole_genome_shotgun_sequence_740536 2.4e+1 48 44 0 4 no blat blast acaggucuuuucuucauuugauu cucaagugaagaaaagacccaugc acaggucuuuucuucauuugauuugaccucaagugaagaaaagacccaugc NW_025323127.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000569_whole_genome_shotgun_sequence:34960..35011:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_398419 2.3e+1 40 37 0 3 no hsa-miR-6790-3p_MIMAT0027481_Homo_sapiens_miR-6790-3p blat blast agaccucgggcacaguuuuucc aaaacugugcccucugucu aaaacugugcccucugucuuuaguacuaccacccuuggccugcggccucgggcgguauccuuaagaccucgggcacaguuuuucc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:4724489..4724574:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_340110 2.3e+1 42 35 0 7 no bta-miR-2310_MIMAT0011822_Bos_taurus_miR-2310 blat blast uuuuuguucgcucggaguaguug auacucagaccaaacaaaagaca auacucagaccaaacaaaagacaauuauuguuuuuguucgcucggaguaguug NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:9022419..9022472:-
NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence_674848 2.3e+1 40 35 0 5 no ppt-miR1053-5p_MIMAT0005170_Physcomitrella_patens_miR1053-5p blat blast uauggguugacagucgacgguc cugacgacuguugcgccauugc cugacgacuguugcgccauugcuugaacgacuauggguugacagucgacgguc NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence:799181..799234:-
NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence_674173 2.3e+1 40 35 0 5 no ppt-miR1053-5p_MIMAT0005170_Physcomitrella_patens_miR1053-5p blat blast uauggguugacagucgacgguc cugacgacuguugcgccauugc cugacgacuguugcgccauugcuugaacgacuauggguugacagucgacgguc NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence:722265..722318:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_208706 2.2e+1 40 39 0 1 no mml-miR-3200-5p_MIMAT0027112_Macaca_mulatta_miR-3200-5p blat blast uaaucugaaggucgugggu cccacccuggucagaguuuu uaaucugaaggucguggguuuaaaucccacccuggucagaguuuu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:11623149..11623194:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_186262 2.2e+1 51 46 0 5 no blat blast uuguuagugaacucgugcagg uugccgagugcguuaaccuguaa uuguuagugaacucgugcagguaaaucgcgauaauucacuugccgagugcguuaaccuguaa NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:13503971..13504033:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_433115 2.1e+1 53 52 0 1 no blat blast acagacgcacggcaacaugg uuugacgucgucuuugaucu uuugacgucgucuuugaucuguuacuaaacagacgcacggcaacaugg NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:6934637..6934685:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_121920 2.1e+1 36 32 0 4 no hvu-miR6208_MIMAT0024836_Hordeum_vulgare_miR6208 blat blast uugcaucauugccaguuuucacu ugaaaacuggcaaugaugc ugaaaacuggcaaugaugcaauaauaauuauugcaucauugccaguuuucacu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:34950489..34950542:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_194094 2.1e+1 38 37 0 1 no gma-miR1524_MIMAT0007385_Glycine_max_miR1524 blat blast cgaguccggauaaucgagguu uuuucgauuauccggacu uuuucgauuauccggacucccgauuauccggacuauuuaucgaggugucuacgaguccggauaaucgagguu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:21792285..21792357:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_93467 2.1e+1 36 32 0 4 no hvu-miR6208_MIMAT0024836_Hordeum_vulgare_miR6208 blat blast uugcaucauugccaguuuucacu ugaaaacuggcaaugaugc ugaaaacuggcaaugaugcaauaauuauuauugcaucauugccaguuuucacu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:34950491..34950544:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_194092 2.1e+1 38 37 0 1 no gma-miR1524_MIMAT0007385_Glycine_max_miR1524 blat blast cgaguccggauaaucgagguu uuuucgauuauccggacu uuuucgauuauccggacucccgauuauccggacuauuuaucgaggugucuacgaguccggauaaucgagguu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:21782375..21782447:-
NW_025322764.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000036_whole_genome_shotgun_sequence_673061 2.1e+1 37 29 0 8 no sbi-miR5565d_MIMAT0022254_Sorghum_bicolor_miR5565d blat blast acuucaauucauggcccucgug ucaggccaugaauugaagc acuucaauucauggcccucgugcuucacacucaggccaugaauugaagc NW_025322764.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000036_whole_genome_shotgun_sequence:725786..725835:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_234140 2.1e+1 36 26 0 10 no mml-miR-7194-3p_MIMAT0028349_Macaca_mulatta_miR-7194-3p blat blast uucagauugcaguaguuaagu uuaacuacuguaaucuga uucagauugcaguaguuaaguauuuaauuacuuaacuacuguaaucuga NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:11598968..11599017:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_518700 2.0e+1 38 34 0 4 no efu-miR-9235a_MIMAT0034844_Eptesicus_fuscus_miR-9235a blat blast augauguggauucuuggccgaacgu uguuuucuaaaaguccuuacacuga augauguggauucuuggccgaacgugacauacauucacguagggauguaucuccuguuuucuaaaaguccuuacacuga NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:7496940..7497019:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_169553 2.0e+1 32 19 1 12 no dps-miR-2566a-1-5p_MIMAT0012394_Drosophila_pseudoobscura_miR-2566a-1-5p blat blast uuuagaaagcugacguuucg aaacgucagcuuucuaaauc uuuagaaagcugacguuucgagcguugcgccuucgucggagcguuggcccuucguccuaucgacucugacgaaggccuaacgcuugaaacgucagcuuucuaaauc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:20426522..20426628:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_104590 1.9e+1 33 22 0 11 no tgu-miR-92-2-5p_MIMAT0031032_Taeniopygia_guttata_miR-92-2-5p blat blast uuggggauuauucgacaauauu auugucgaauaauccccucc auugucgaauaauccccuccacuucgucuuggggauuauucgacaauauu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:13599701..13599751:-
NW_025322804.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000145_whole_genome_shotgun_sequence_699633 1.9e+1 44 34 0 10 no efu-miR-9235a_MIMAT0034844_Eptesicus_fuscus_miR-9235a blat blast augauguggauucuuggccgaacgu cuguuuucuaaaaguccuuacacugaaga augauguggauucuuggccgaacgugacauacauacacguaggaauguaucuccuguuuucuaaaaguccuuacacugaaga NW_025322804.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000145_whole_genome_shotgun_sequence:134433..134515:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_493677 1.8e+1 33 14 0 19 no hsa-miR-4272_MIMAT0016902_Homo_sapiens_miR-4272 blat blast aauucaacaucauacgaaacccu aguuucgucugauauugauuau aguuucgucugauauugauuauuuaaaauaauucaacaucauacgaaacccu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:18661339..18661391:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_529371 1.8e+1 36 27 0 9 no blat blast uuaaauaguugaggucagcaagg uugcugaccucaacuauuuaaua uugcugaccucaacuauuuaauaauaaauauuaaauaguugaggucagcaagg NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:17187404..17187457:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_546972 1.8e+1 36 27 0 9 no blat blast uuaaauaguugaggucagcaagg uugcugaccucaacuauuuaaua uugcugaccucaacuauuuaauauuuauuauuaaauaguugaggucagcaagg NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:17187402..17187455:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_243154 1.7e+1 36 33 0 3 no blat blast uaucucugugauugguuguucugu agaucaaccaaucagagcaugaca agaucaaccaaucagagcaugacacuuguauuguuaucucugugauugguuguucugu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:23605878..23605936:-
NW_025322823.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000167_whole_genome_shotgun_sequence_704425 1.7e+1 36 33 0 3 no blat blast uaucucugugauugguuguucugu agaucaaccaaucagagcaugaca agaucaaccaaucagagcaugacacuuguauuguuaucucugugauugguuguucugu NW_025322823.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000167_whole_genome_shotgun_sequence:100096..100154:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_71083 1.7e+1 28 22 0 6 no mmu-miR-1199-5p_MIMAT0005860_Mus_musculus_miR-1199-5p blat blast ucugagucaauagcccauucggc ucgugggcuauugauucagggc ucugagucaauagcccauucggccuuuggccucgugggcuauugauucagggc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:6123098..6123151:+
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_606669 1.7e+1 31 30 0 1 no osa-miR1866-3p_MIMAT0009212_Oryza_sativa_miR1866-3p blat blast ugaaauuccucgccugauuacu uaaacgcgcucguaauuu uaaacgcgcucguaauuucaaaauugauuuugaaauuccucgccugauuacu NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:75753..75805:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_136687 1.6e+1 27 23 0 4 no ami-miR-P-novel-14-3p_Acropora_millepora_Praher_et_al._2021_NA blat blast ugcaacagcuauaugaaccuaac agguccauauagcuguuguuuaa agguccauauagcuguuguuuaagauugaaugcaacagcuauaugaaccuaac NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:17703228..17703281:+
NW_025322777.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000098_whole_genome_shotgun_sequence_686072 1.6e+1 34 22 0 12 no blat blast ugcguaguuuccucguggccuuc aaggcaacgaggaaaccacgcaa ugcguaguuuccucguggccuucuuuuaagaaggcaacgaggaaaccacgcaa NW_025322777.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000098_whole_genome_shotgun_sequence:476293..476346:-
NW_025322689.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000203_whole_genome_shotgun_sequence_653160 1.6e+1 27 21 0 6 no bma-miR-9514_MIMAT0037507_Brugia_malayi_miR-9514 blat blast caaaaagagaacucggccaa uggccucguucucuuuuugcg uggccucguucucuuuuugcguuuuuaugcaaaaagagaacucggccaa NW_025322689.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000203_whole_genome_shotgun_sequence:157624..157673:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_209869 1.5e+1 24 16 0 8 no gga-miR-1782_MIMAT0007694_Gallus_gallus_miR-1782 blat blast acauucaugacuuuugcagug ugcaaaagucaugaauguugaaa ugcaaaagucaugaauguugaaauaauuccaacauucaugacuuuugcagug NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:13263517..13263569:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_142893 1.3e+1 21 8 0 13 no mml-miR-15a-3p_MIMAT0026593_Macaca_mulatta_miR-15a-3p blat blast ucaggccauaaauugaagugga acuucaauucauggcccuca acuucaauucauggcccucaugcuuugcauucaggccauaaauugaagugga NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:5406680..5406732:-
NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence_558867 1.2e+1 23 21 0 2 no tca-miR-3803-3p_MIMAT0018623_Tribolium_castaneum_miR-3803-3p blat blast uaauguccauauagcaguucuugau ucuaauacucugcuauguggu ucuaauacucugcuaugugguacaacuguauauuguucauuguccuuuucuaacuggaaggugguauuaauguccauauagcaguucuugau NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence:1499978..1500070:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_235248 1.2e+1 18 16 0 2 no gga-miR-1782_MIMAT0007694_Gallus_gallus_miR-1782 blat blast acauucaugacuuuugcagug acugcaaaagucaugaauguug acugcaaaagucaugaauguuggaauuauuucaacauucaugacuuuugcagug NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:13263514..13263568:-
NW_025322834.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000181_whole_genome_shotgun_sequence_706715 1.2e+1 23 21 0 2 no tca-miR-3803-3p_MIMAT0018623_Tribolium_castaneum_miR-3803-3p blat blast uaauguccauauagcaguucuugau ucuaauacucugcuauguggu ucuaauacucugcuaugugguacaacuguauauuguucauuguccuuuucuaacuggaaggugguauuaauguccauauagcaguucuugau NW_025322834.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000181_whole_genome_shotgun_sequence:11896..11988:+
NW_025322652.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000145_whole_genome_shotgun_sequence_626697 1.1e+1 18 15 0 3 no gga-miR-1611_MIMAT0007477_Gallus_gallus_miR-1611 blat blast agagggcuaauuaacaugc uguuaauuagcccucuuugc uguuaauuagcccucuuugccucauuuucacuucaaaauucuuuuguuuuuuauacuuguagacgagacaaagagggcuaauuaacaugc NW_025322652.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000145_whole_genome_shotgun_sequence:277503..277593:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_320085 1.1e+1 18 15 0 3 no gga-miR-1611_MIMAT0007477_Gallus_gallus_miR-1611 blat blast agagggcuaauuaacaugc uguuaauuagcccucuuugc uguuaauuagcccucuuugccucauuuucacuucaaaauucuuuuauuuuuuauacuuguagacgagacaaagagggcuaauuaacaugc NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:1599329..1599419:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_185110 1.1e+1 18 11 0 7 no gga-miR-1626-5p_MIMAT0007495_Gallus_gallus_miR-1626-5p blat blast uuuccauguuguuaaccuuuuu aaggguuauuaacagggacauagu aaggguuauuaacagggacauagucuuuggcuuuccauguuguuaaccuuuuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:11859336..11859389:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_185108 1.1e+1 18 11 0 7 no gga-miR-1626-5p_MIMAT0007495_Gallus_gallus_miR-1626-5p blat blast uuuccauguuguuaaccuuuuu aaggguuauuaacagggacauagu aaggguuauuaacagggacauagucuuuggcuuuccauguuguuaaccuuuuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:11859124..11859177:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_481007 9.7 20 15 0 5 no blat blast uuauagcuacauauuauuaugu uaauaauauguagcuauaaua uaauaauauguagcuauaauaauauaauuuauauuauuauagcuacauauuauuaugu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:1665786..1665844:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_498084 9.6 20 15 0 5 no blat blast uuauagcuacauauuauuaugu uaauaauauguagcuauaaua uaauaauauguagcuauaauaauauaaauuauauuauuauagcuacauauuauuaugu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:1665783..1665841:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_156982 9.6 17 16 0 1 no hsa-miR-6885-3p_MIMAT0027671_Homo_sapiens_miR-6885-3p blat blast cuuugcuuuugggucgccg gcucagcucaagaacgccacu gcucagcucaagaacgccacuguacaaagcuuugcuuuugggucgccg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:3680457..3680505:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_217365 9.0 16 14 0 2 no bmo-miR-3372-5p_MIMAT0015559_Bombyx_mori_miR-3372-5p blat blast auuauuauuauuucuguccagu uugauaguaauaauaauaauua uugauaguaauaauaauaauuaauucuaauaauuauuauuauuucuguccagu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:21555172..21555225:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_63223 8.9 13 11 0 2 no bdi-miR9496_MIMAT0035505_Brachypodium_distachyon_miR9496 blat blast uugguuggagcgcugcaccggu gaggucauggguucgaaucc uugguuggagcgcugcaccgguauugccgaggucauggguucgaaucc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:33893415..33893463:-
NW_025322766.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000046_whole_genome_shotgun_sequence_675486 8.6 10 4 5 1 no ssc-miR-7134-5p_MIMAT0028143_Sus_scrofa_miR-7134-5p blat blast auguccgcgaguauuauaug uauaauacgcgcggauac uauaauacgcgcggauacuuugcgaguugcguaguauuuuaccgagccccgcaggggcgaggaaaaaugcgagcaaugagcaaaauguccgcgaguauuauaug NW_025322766.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000046_whole_genome_shotgun_sequence:527832..527936:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_10330 8.5 10 7 0 3 no ppt-miR902k-3p_MIMAT0005086_Physcomitrella_patens_miR902k-3p blat blast ucgaaggaaucgacgcauccacu cggaugcuucgguuccucug ucgaaggaaucgacgcauccacucugggagcggaugcuucgguuccucug NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:12185087..12185137:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_1611 8.5 11 7 0 4 no mdm-miR7126-3p_MIMAT0037475_Malus_domestica_miR7126-3p blat blast uugcguucauaacugcgggaauc ccucgcagcuaugaacgcaau ccucgcagcuaugaacgcaauuuaugcauaaauugcguucauaacugcgggaauc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:1550111..1550166:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_532082 8.4 11 5 0 6 no tca-miR-9c-3p_MIMAT0018715_Tribolium_castaneum_miR-9c-3p blat blast acgcgucuuuuugggugucacuc guaacauucugaaagacgguagc acgcgucuuuuugggugucacucaauguugcguaacauucugaaagacgguagc NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:3069883..3069937:-
NW_025322627.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000080_whole_genome_shotgun_sequence_591390 8.4 11 6 0 5 no rno-miR-146a-3p_MIMAT0017132_Rattus_norvegicus_miR-146a-3p blat blast cccugugaacgagguugcugauu uagacaaccucaaucccagggu uagacaaccucaaucccaggguccuugaagacccugugaacgagguugcugauu NW_025322627.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000080_whole_genome_shotgun_sequence:17806..17860:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_422748 8.3 10 7 0 3 no mmu-miR-21a-3p_MIMAT0004628_Mus_musculus_miR-21a-3p blat blast caacagcaagaugucguaggcu ccuacuacaucuugcuguggu ccuacuacaucuugcugugguguuuaacacaacagcaagaugucguaggcu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:11450620..11450671:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_467541 7.7 16 15 0 1 no blat blast uuucgagcguuagcccuucgu caagggcuaacgcucgaaacga uuucgagcguuagcccuucgucaaagccaagggcuaacgcucgaaacga NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:8509802..8509851:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_32670 7.5 9 8 0 1 no dsi-miR-2580_MIMAT0012517_Drosophila_simulans_miR-2580 blat blast cgugucuguguuaucuaccucag ucggcagauaacagagaccuugg cgugucuguguuaucuaccucagccuuuggcuucggcagauaacagagaccuugg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:37969129..37969184:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_199338 7.5 9 7 0 2 no csi-miR12107-5p_MIMAT0048971_Citrus_sinensis_miR12107-5p blat blast uugaugagacuauuaauuguu aaauuaauagucucaucaaua aaauuaauagucucaucaauaauuauuauugaugagacuauuaauuguu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:28202062..28202111:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_292568 7.5 12 4 7 1 no cst-miR11331_MIMAT0044621_Cucumis_sativus_miR11331 blat blast uguugagugcuuauccugc caguuaguagaucucaguucag caguuaguagaucucaguucaguuugagaaacacagacccguuucacucuggguagucucucaaacuccucuguugagugcuuauccugc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:15846319..15846409:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_496394 7.4 9 7 0 2 no mml-miR-301a-5p_MIMAT0026850_Macaca_mulatta_miR-301a-5p blat blast ucugacuuguuuugcauugaaucu uacaaugcaaaacaaguu ucugacuuguuuugcauugaaucuuuaagauacaaugcaaaacaaguu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:21684348..21684396:+
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_553002 7.2 16 14 0 2 no blat blast uugucugacuuuauuacucaug uguguaauagggucagacaaua uguguaauagggucagacaauauuauuauugucugacuuuauuacucaug NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:1406836..1406886:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_276267 7.1 8 7 0 1 no bta-miR-2311_MIMAT0011826_Bos_taurus_miR-2311 blat blast aacugaaauaugcaugcaucuaa gaugcaagcauauuucaguu aacugaaauaugcaugcaucuaauuauuagaugcaagcauauuucaguu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:17582881..17582930:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_485095 6.9 6 5 0 1 no stu-miR8051-3p_MIMAT0031240_Solanum_tuberosum_miR8051-3p blat blast cauuucuuucgcuacuguuuaagu uaaacaguagcgaaagaaaggcc uaaacaguagcgaaagaaaggccuguauggcaugcauggcauuucuuucgcuacuguuuaagu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:7790080..7790143:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_388624 6.3 6 4 0 2 no mdv2-miR-M28-3p_MIMAT0004475_Mareks_disease_miR-M28-3p blat blast ugaggguaugaaaaaacaaaaa uuuuguuuuuucauacccucgacu uuuuguuuuuucauacccucgacuuaaguugaggguaugaaaaaacaaaaa NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:12442455..12442506:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_455446 6.2 6 3 0 3 no gga-miR-1758_MIMAT0007665_Gallus_gallus_miR-1758 blat blast acaccaagacauccacagcuaga cagcuguggguguguuggaagg cagcuguggguguguuggaaggaucagaggcacaccaagacauccacagcuaga NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:16910415..16910469:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_530341 6.2 9 8 0 1 no mmu-miR-290b-5p_MIMAT0029900_Mus_musculus_miR-290b-5p blat blast ucuuaaaacugccacugguagggc ucgcgggaggcauuuuuggucac ucuuaaaacugccacugguagggcuuuuagugcucgcgggaggcauuuuuggucac NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:914214..914270:-
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_552812 6.1 15 14 0 1 no hsa-miR-5571-5p_MIMAT0022257_Homo_sapiens_miR-5571-5p blat blast aaauucucgaagcaacuguaucucc aaguuuacagcuggcucucucgaucauuugu aaauucucgaagcaacuguaucuccagguaaaguuuacagcuggcucucucgaucauuugu NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:1227329..1227390:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_500478 6.1 6 4 1 1 no mmu-miR-7058-3p_MIMAT0028021_Mus_musculus_miR-7058-3p blat blast uucguuccguuguacuucacc gcgaaguagaacggaaaca gcgaaguagaacggaaacaaaaaucguguuuuccgaugucucugacaucagagaucggaacacacgauuuucguuccguuguacuucacc NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:5182254..5182344:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_501028 5.8 5 4 0 1 no ppt-miR1039-3p_MIMAT0005149_Physcomitrella_patens_miR1039-3p blat blast ugggagacgaaagaccuugaga ccagcgucuuucaucuccccaccu ccagcgucuuucaucuccccaccucuuuggggugggagacgaaagaccuugaga NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:6024748..6024802:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_415085 5.7 8 4 0 4 no ahy-miR3518_MIMAT0016344_Arachis_hypogaea_miR3518 blat blast ugaccuuucucucacuguuccuua gcaguagugagagaaaggccuga gcaguagugagagaaaggccugaauuuuucugaccuuucucucacuguuccuua NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:3244343..3244397:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_394516 5.5 21 20 0 1 no mdo-miR-1546-5p_MIMAT0006146_Monodelphis_domestica_miR-1546-5p blat blast ucagggaucuaaaaauauuu uacguuuauggauucuugaagu uacguuuauggauucuugaaguaaugcucuucucagggaucuaaaaauauuu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:21156867..21156919:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_404497 5.4 4 3 0 1 no ebv-miR-BART19-3p_MIMAT0003718_Epstein_Barr_miR-BART19-3p blat blast uuuuguuuuuucauacccucaac cgaggguaugaaaaaacaaaaau uuuuguuuuuucauacccucaacuuaagucgaggguaugaaaaaacaaaaau NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:12442453..12442505:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_365236 5.4 10 7 0 3 no rgl-miR5142_MIMAT0020653_Rehmannia_glutinosa_miR5142 blat blast uuauugauggcucuugcucaua ugaacaagugcuaccaauaaua ugaacaagugcuaccaauaauauaauauaauuauuauugauggcucuugcucaua NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:3881798..3881853:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_48496 5.2 6 5 0 1 no hsa-miR-1245a_MIMAT0005897_Homo_sapiens_miR-1245a blat blast cagugauccgguugggga agauaccgugucacugagcgag agauaccgugucacugagcgaggauaacuccacuuugacgcucagugauccgguugggga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:19094446..19094506:-
NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence_584228 5.2 9 7 0 2 no cli-miR-9633-3p_MIMAT0038758_Columba_livia_miR-9633-3p blat blast ccauccagaucuagcuuu gguugaucuguuagucuguu ccauccagaucuagcuuucccguaaaguguuugcgaaaagguugaucuguuagucuguu NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence:1226677..1226736:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_185621 5.1 3 2 0 1 no hsa-miR-891b_MIMAT0004913_Homo_sapiens_miR-891b blat blast agcaacuucugaaaacacaagu cguguuuucagagguugcu cguguuuucagagguugcugaaauugcccuggucgcgcagcgacgagggcaguuucagcaacuucugaaaacacaagu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:12638890..12638968:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_197507 5.0 4 3 0 1 no ptc-miR7839_MIMAT0030395_Populus_trichocarpa_miR7839 blat blast uguggcaucuggguguaaau uuuucacccagaugccaca uguggcaucuggguguaaauauuauuauuauuuucacccagaugccaca NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:25717584..25717633:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_92131 4.9 18 8 10 0 no bmo-miR-184-3p_MIMAT0007902_Bombyx_mori_miR-184-3p blat blast ucuggacggauaaugcgucu acgcauuacucauccagacg acgcauuacucauccagacgaacuaucuucuguugugcgacuugaacgacgcacaacagaagaugguucgucuggacggauaaugcgucu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:33384046..33384136:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_18570 4.9 3 2 0 1 no bta-miR-6527_MIMAT0025561_Bos_taurus_miR-6527 blat blast cacguggacucugggaaca uucccagagcccacgugucuuuu uucccagagcccacgugucuuuugguuuggcgcugaccaaaagacacguggacucugggaaca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:22413715..22413778:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_118024 4.9 3 2 0 1 no efu-miR-9273_MIMAT0034910_Eptesicus_fuscus_miR-9273 blat blast uacuauucucacugcauauaua uauaugcagugagaauaguacu uacuauucucacugcauauauaauaguuauauaugcagugagaauaguacu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:30875283..30875334:-
NW_025322874.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000223_whole_genome_shotgun_sequence_714548 4.8 240 240 0 0 no cin-miR-4064-3p_MIMAT0016617_Ciona_intestinalis_miR-4064-3p blat blast gacaaccggaaauacgucu acguauuuccgguugucgu acguauuuccgguugucguuucucuucuccuucuucgggcggagagaagcgacaaccggaaauacgucu NW_025322874.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000223_whole_genome_shotgun_sequence:32544..32613:-
NW_025322874.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000223_whole_genome_shotgun_sequence_714485 4.7 252 252 0 0 no cin-miR-4064-3p_MIMAT0016617_Ciona_intestinalis_miR-4064-3p blat blast gacaaccggaaauacgucu acguauuuccgguugucgc acguauuuccgguugucgcuucucuccgcccgaagaaggagaagagaaacgacaaccggaaauacgucu NW_025322874.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000223_whole_genome_shotgun_sequence:32546..32615:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_352650 4.7 40 40 0 0 no tgu-miR-2981_MIMAT0014491_Taeniopygia_guttata_miR-2981 blat blast ucgggccgcaaaugacacuaca uagugucauuugcgacccgagc uagugucauuugcgacccgagcgcuucgcgcucgggccgcaaaugacacuaca NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:9597638..9597691:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_41860 4.7 4 3 0 1 no gga-miR-6571-3p_MIMAT0025650_Gallus_gallus_miR-6571-3p blat blast agagagaccaugggaacgagg cguucccagggucucuac cguucccagggucucuacccuacucucucgcuccaggggaagggaagaagagagaccaugggaacgagg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:11258167..11258236:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_436758 4.6 5 4 0 1 no mmu-miR-7042-5p_MIMAT0027988_Mus_musculus_miR-7042-5p blat blast uagagacaaaagaaauaagaaauc uucuaauuucuuugugucugu uucuaauuucuuugugucuguucauuguaauaaguagagacaaaagaaauaagaaauc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:11419549..11419607:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_426380 4.5 206 194 0 12 no ppy-miR-513a-1-3p_MIMAT0015939_Pongo_pygmaeus_miR-513a-1-3p blat blast aaaaucucagaccucggccuug ccucggucugagauuucccu aaaaucucagaccucggccuugauguauagaccucgcuaucgcucggucaauacaucaaggccucggucugagauuucccu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:16681358..16681439:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_135915 4.4 3 2 0 1 no mmu-miR-7094-1-5p_MIMAT0028094_Mus_musculus_miR-7094-1-5p blat blast ucugaagauuccagucaccagu cggucacugcaaucuucaguucg ucugaagauuccagucaccaguaucugaccggucacugcaaucuucaguucg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:16547279..16547331:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_135919 4.4 3 2 0 1 no mmu-miR-7094-1-5p_MIMAT0028094_Mus_musculus_miR-7094-1-5p blat blast ucugaagauuccagucaccagu cggucacugcaaucuucaguucg ucugaagauuccagucaccaguaucugaccggucacugcaaucuucaguucg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:16560770..16560822:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_353827 4.4 3 2 0 1 no dre-miR-2188-3p_MIMAT0011310_Danio_rerio_miR-2188-3p blat blast uugugugaaaacccgaacg uaagggcuuuugacacaaa uugugugaaaacccgaacgaacgagguacgagcgaguaagggcuuuugacacaaa NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:11922549..11922604:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_329786 4.4 125 125 0 0 no sme-miR-2164-5p_MIMAT0012156_Schmidtea_mediterranea_miR-2164-5p blat blast auauauuuuugcaacugauacuga aguaucaguugcaaaaauauauca auauauuuuugcaacugauacugaugaucaguaucaguugcaaaaauauauca NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:13645715..13645768:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_318643 4.4 100 99 0 1 no rno-miR-185-3p_MIMAT0017142_Rattus_norvegicus_miR-185-3p blat blast uuuccucuucccgacuuaucu agguaaguccggaagaggaaag agguaaguccggaagaggaaagaccuguucuuuccucuucccgacuuaucu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:24040223..24040274:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_343229 4.4 125 125 0 0 no sme-miR-2164-5p_MIMAT0012156_Schmidtea_mediterranea_miR-2164-5p blat blast auauauuuuugcaacugauacuga aguaucaguugcaaaaauauauca auauauuuuugcaacugauacugaucaucaguaucaguugcaaaaauauauca NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:13645713..13645766:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_346918 4.4 3 2 0 1 no mml-miR-934-3p_MIMAT0026914_Macaca_mulatta_miR-934-3p blat blast aagucuucugccaagugcgucu cgcacuugaaagaagacguua aagucuucugccaagugcgucuuugagacgcacuugaaagaagacguua NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:892258..892307:+
NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence_733556 4.4 44 43 1 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu aaaaggcucuuucccuggug aaaaggcucuuucccugguguucgcugacgggagucucuuuucucccgucagcaaacaccaggaaaagagccucugcu NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence:155307..155385:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_328494 4.4 206 194 0 12 no ppy-miR-513a-1-3p_MIMAT0015939_Pongo_pygmaeus_miR-513a-1-3p blat blast aaaaucucagaccucggccuug ccucggucugagauuucccu aaaaucucagaccucggccuugagguauugaccgagcgauaacaaggucaauacaucaaggccucggucugagauuucccu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:12245912..12245993:+
NW_025322832.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000179_whole_genome_shotgun_sequence_706421 4.3 13 13 0 0 no mmu-miR-1946b_MIMAT0009443_Mus_musculus_miR-1946b blat blast cccgggcauuuggacuuuuga aaugguucaaaugcccaggcu cccgggcauuuggacuuuugaagacugaacuuuugaagauugaaugguucaaaugcccaggcu NW_025322832.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000179_whole_genome_shotgun_sequence:161032..161095:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_149839 4.3 14 13 1 0 no asu-miR-92-5p_MIMAT0021485_Ascaris_suum_miR-92-5p blat blast uggccgaguucucuuuuugcg caaaaacagaacguggccaau uggccgaguucucuuuuugcguuguuauggaccgagacgaagucgagguccauaaaacgcaaaaacagaacguggccaau NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:14077084..14077164:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_302065 4.3 11 6 0 5 no blat blast ucgauuauuugguccaagacau ucucagaccaaauaauccagcu ucgauuauuugguccaagacauuuuaucugucucagaccaaauaauccagcu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:3047993..3048045:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_131399 4.3 44 44 0 0 no ppy-miR-1270_MIMAT0016194_Pongo_pygmaeus_miR-1270 blat blast guggagagaugaaagacccugg agggucuuucaucucccggucc agggucuuucaucucccggucccaaagggagcuagggagaauuuaagccucguucccucgcucucuuugggguggagagaugaaagacccugg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:11567963..11568056:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_236670 4.2 13 13 0 0 no xla-miR-93-3p_MIMAT0046614_Xenopus_laevis_miR-93-3p blat blast ccugcaugcacucuuuuuaaua uuaaaaagagagcaugcgagca uuaaaaagagagcaugcgagcaugaaugugccugcaugcacucuuuuuaaua NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:15598425..15598477:-
NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence_575138 4.2 54 54 0 0 no dps-miR-2517-3p_MIMAT0012343_Drosophila_pseudoobscura_miR-2517-3p blat blast aauugauugggauacaggagcuu gcuccuguaucccaaucaaauca aauugauugggauacaggagcuucugagaagcuccuguaucccaaucaaauca NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence:966992..967045:+
NW_025322763.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000033_whole_genome_shotgun_sequence_672541 4.2 13 11 0 2 no bra-miR9557-5p_MIMAT0035667_Brassica_rapa_miR9557-5p blat blast uuuugcguuuuuauggaccucga uuucgguccauaaaaacgcau uuuugcguuuuuauggaccucgacguccuuucgguccauaaaaacgcau NW_025322763.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000033_whole_genome_shotgun_sequence:614957..615006:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_402538 4.2 203 203 0 0 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg gcguugacuaucgcucguaga uacgagcagauagucaacgaggcgcagccgcguugacuaucgcucguaga NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:10058984..10059034:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_366210 4.2 182 182 0 0 no cin-miR-4087-3p_MIMAT0016663_Ciona_intestinalis_miR-4087-3p blat blast ucguggauccacagcuacuuuga caaguagucugcggauccauucgg caaguagucugcggauccauucggcuaucgccucguggauccacagcuacuuuga NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:5306571..5306626:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_447480 4.2 2 1 0 1 no gga-miR-30c-2-3p_MIMAT0026515_Gallus_gallus_miR-30c-2-3p blat blast ugggagaauuguugacaguuaug aacugucucgaauucuccca ugggagaauuguugacaguuaugcaaacucucgacuucagcggucucggauuugcaacugucucgaauucuccca NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:8675444..8675519:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_92459 4.2 5 3 0 2 no cin-miR-5600-5p_MIMAT0022323_Ciona_intestinalis_miR-5600-5p blat blast ucgaaaccagucgcgcggcau aagguggcugaacagaguuu ucgaaaccagucgcgcggcauuuuaagguggcugaacagaguuu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:33771116..33771160:+
NW_025322663.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000161_whole_genome_shotgun_sequence_638850 4.2 31 29 0 2 no oan-miR-590-3p_MIMAT0007097_Ornithorhynchus_anatinus_miR-590-3p blat blast aacuuuuacguuuacgcgcggcu uaagcguaaaaguugagcg uaagcguaaaaguugagcgagguucaacuuuuacguuuacgcgcggcu NW_025322663.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000161_whole_genome_shotgun_sequence:464490..464538:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_324933 4.1 37 37 0 0 no oan-miR-1422a-3p_MIMAT0006880_Ornithorhynchus_anatinus_miR-1422a-3p blat blast cagaaaauacaagugacuggug cucgucgcuuguauuuucuuggu cucgucgcuuguauuuucuugguauacacacucggcuaauagcucguauguguaucagaaaauacaagugacuggug NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:7534572..7534649:+
NW_025322633.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000098_whole_genome_shotgun_sequence_599644 4.1 30 29 0 1 no odi-miR-1476-3p_MIMAT0006028_Oikopleura_dioica_miR-1476-3p blat blast cacauguaaaguucgacguu aacgucgagcuuugcaugu aacgucgagcuuugcaugugccgaaccuaauuauuagguucgacacauguaaaguucgacguu NW_025322633.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000098_whole_genome_shotgun_sequence:381435..381498:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_29492 4.1 4 2 0 2 no hsa-miR-4327_MIMAT0016889_Homo_sapiens_miR-4327 blat blast ggcuugcaguuggagaucguguau aucacgauuuaacaagggcaagcu ggcuugcaguuggagaucguguauuggaaauaaacaaucacgauuuaacaagggcaagcu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:34073549..34073609:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_497039 4.1 78 68 0 10 no hsa-miR-598-3p_MIMAT0003266_Homo_sapiens_miR-598-3p blat blast uacgucauugaguugcuugcugu agcaagcaacucgaugacguaa uacgucauugaguugcuugcuguauuaaaacagcaagcaacucgaugacguaa NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:335217..335270:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_508267 4.1 15 15 0 0 no hsa-miR-148a-5p_MIMAT0004549_Homo_sapiens_miR-148a-5p blat blast aaaguucucaaauugcacucgc gacucgugcaauuugagaacuuuaa aaaguucucaaauugcacucgccugcgacucgugcaauuugagaacuuuaa NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:15776154..15776205:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_226017 4.1 3 1 0 2 no bdi-miR7766-5p_MIMAT0030280_Brachypodium_distachyon_miR7766-5p blat blast ucaacugguagagcaaug ccagcucccagucggccugau ccagcucccagucggccugauggucaacugguagagcaaug NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:985143..985184:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_403951 4.1 14 14 0 0 no bta-miR-3432b_MIMAT0036976_Bos_taurus_miR-3432b blat blast uucgggaugucacgcaacgc guugcgugacauccccaaag uucgggaugucacgcaacgcucucccaaaaugugagcagcuguuccuuuugggguagcguugcgugacauccccaaag NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:11655735..11655813:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_218206 4.1 15 12 0 3 no bdi-miR395j-5p_MIMAT0027093_Brachypodium_distachyon_miR395j-5p blat blast uuuucccgagaguccuguuu ucaggacucgagggaaaacg uuuucccgagaguccuguuucccgagacgaagucgaaggaaacaucaggacucgagggaaaacg NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:22955052..22955116:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_9041 4.1 202 202 0 0 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg gagucgacuaucgcucguaga uacgagcagauagucaacgaggcgaagccgagucgacuaucgcucguaga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:10125869..10125919:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_369132 4.0 62 56 0 6 no gga-miR-6577-5p_MIMAT0025661_Gallus_gallus_miR-6577-5p blat blast uaucuucugcgaucgucugcga ucgcaggcgaucgcagaagugu uaucuucugcgaucgucugcgaucacgaucgcaggcucgcaggcgaucgcagaagugu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:10315097..10315155:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_71270 4.0 18 18 0 0 no mdv1-miR-M11-5p_MIMAT0005982_Mareks_disease_miR-M11-5p blat blast auuuccuuugucaguaagcugg agcuuacugacaaaggaaacucuuga auuuccuuugucaguaagcugguccauggccagcuuacugacaaaggaaacucuuga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:6547154..6547211:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_369936 4.0 203 203 0 0 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg gagucgacuaucgcucguaca uacgagcagauagucaacgaggcgcagccgagucgacuaucgcucguaca NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:11594259..11594309:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_81975 4.0 24 22 1 1 no bdi-miR159b-3p.3_MIMAT0030084_Brachypodium_distachyon_miR159b-3p.3 blat blast uuugcauguuaauuagcccucu agagggcuuauuaacaugcaaacaaa uuugcauguuaauuagcccucuucgccucauuuucacuucaaaauucuuuuguuuuuuauacauguugacgaggcgaagagggcuuauuaacaugcaaacaaa NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:21957592..21957695:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_468913 4.0 2 1 0 1 no bta-miR-2385-3p_MIMAT0011936_Bos_taurus_miR-2385-3p blat blast gaguacuccucgaucguuggca guaagacggaucgagggcucccugugg gaguacuccucgaucguuggcaagaugguaagacggaucgagggcucccugugg NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:9325778..9325832:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_111766 4.0 21 21 0 0 no mtr-miR2592a-3p_MIMAT0020946_Medicago_truncatula_miR2592a-3p blat blast caaaaacaaaagggacgccuga aggcguuccuuuacuuuuuguc aggcguuccuuuacuuuuugucggggcgacaaaaacaaaagggacgccuga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:22818413..22818464:-
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_607370 4.0 21 21 0 0 no hco-miR-5973_MIMAT0023480_Haemonchus_contortus_miR-5973 blat blast cuugcuggcgauuuugacaauu uugucaaaauugccaacaaggc uugucaaaauugccaacaaggcuuugcauugccuugcuggcgauuuugacaauu NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:422907..422961:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_395408 4.0 49 49 0 0 no cin-miR-4052-3p_MIMAT0016594_Ciona_intestinalis_miR-4052-3p blat blast ucacuugacucugaagauggcu ccaucgucagagucaaaugauu ccaucgucagagucaaaugauugucuuucuccuuucaacugacuaagacaaucacuugacucugaagauggcu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:489557..489630:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_424051 4.0 108 108 0 0 no pte-miR-35q-5p_MIMAT0046210_Parasteatoda_tepidariorum_miR-35q-5p blat blast ucgaaauacagaaaggacccugg aggguccuuucucuacuucgaga aggguccuuucucuacuucgagaaaguacuuucucgaaauacagaaaggacccugg NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:13372420..13372476:+
NW_025323153.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000596_whole_genome_shotgun_sequence_748216 4.0 16 16 0 0 no sja-miR-31-3p_MIMAT0016256_Schistosoma_japonicum_miR-31-3p blat blast ugcuucacuguucaaaacuuagu uaaguuuggaacagugaagcaugcaga ugcuucacuguucaaaacuuagugaauaacucacuaaguuuggaacagugaagcaugcaga NW_025323153.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000596_whole_genome_shotgun_sequence:28118..28179:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_257023 3.9 12 12 0 0 no rno-miR-881-3p_MIMAT0005289_Rattus_norvegicus_miR-881-3p blat blast uaacuguggagaaagugcuacc aagcacuuucuccacaguuauu aagcacuuucuccacaguuauuaacaauaacuguggagaaagugcuacc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:10275892..10275941:+
NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence_617746 3.9 20 11 9 0 no ppt-miR1041_MIMAT0005151_Physcomitrella_patens_miR1041 blat blast cuuucgggcuaggggucu acccuucgcccucaaggg acccuucgcccucaagggcuacggaucaauagcccauucggcuucgccucaugggcccuuucgggcuaggggucu NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence:386385..386460:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_190500 3.9 673 673 0 0 no ppt-miR1060_MIMAT0005178_Physcomitrella_patens_miR1060 blat blast uuugucauuucucucuaccaaca uugguagagagaaaaauaaaaa uugguagagagaaaaauaaaaauuuugucauuucucucuaccaaca NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:16979399..16979445:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_107295 3.9 138 138 0 0 no sfv-miR-S3-5p_MIMAT0040976_Simian_foamy_miR-S3-5p blat blast cagggaguaaucggacgagug cuagcacgauuaccccugaa cagggaguaaucggacgagugauuucaaaacagacgaacgcgaagcgugaggcugauuugaaauuacuagcacgauuaccccugaa NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:16096845..16096931:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_406451 3.9 48 29 0 19 no ppt-miR1075_MIMAT0005205_Physcomitrella_patens_miR1075 blat blast uguuucaguuuuucucgguguu aacgcugaaaaagacugaugcagg uguuucaguuuuucucgguguuuguuaacaaacgcugaaaaagacugaugcagg NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:15273904..15273958:-
NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence_580600 3.9 3 2 0 1 no dre-miR-2188-3p_MIMAT0011310_Danio_rerio_miR-2188-3p blat blast uugugugaaaacccgaacg uaagggcuuuugacacaaa uugugugaaaacccgaacgagcgaggaacgagugaguaagggcuuuugacacaaa NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence:944713..944768:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_270828 3.9 27 27 0 0 no rno-miR-881-3p_MIMAT0005289_Rattus_norvegicus_miR-881-3p blat blast uaacuguggagaaagugcuuc agcacuuucuccacaguuauu agcacuuucuccacaguuauuguuaauaacuguggagaaagugcuuc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:10275891..10275938:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_41109 3.9 205 203 0 2 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg ugacuaucgcucgcagaaa uacgagcagauagucaacgaggcgcagccgaguugacuaucgcucgcagaaa NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:10197327..10197379:-
NW_025323163.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000607_whole_genome_shotgun_sequence_749665 3.9 176 166 0 10 no oni-miR-10783_MIMAT0043292_Oreochromis_niloticus_miR-10783 blat blast cccguugaaguccugacuuuu ucaggacuucaacaggguuu ucaggacuucaacaggguuugaacugugaccccguugaaguccugacuuuu NW_025323163.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000607_whole_genome_shotgun_sequence:64259..64310:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_510970 3.9 12 12 0 0 no mmu-miR-692_MIMAT0003471_Mus_musculus_miR-692 blat blast uucucuuuaaccgcuuugcgacc ucgcgaagccgcgagagagaaaa ucgcgaagccgcgagagagaaaaauccuuuuucucuuuaaccgcuuugcgacc NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:19913089..19913142:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_414682 3.8 32 32 0 0 no tur-miR-5728-3p_MIMAT0023033_Tetranychus_urticae_miR-5728-3p blat blast uuugccacuguagaaaguuug aacuuucuacgguggcaaaau uuugccacuguagaaaguuugaaaggcaagaccucaugucuuucaacuuucuacgguggcaaaau NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:2457508..2457573:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_158297 3.8 22 22 0 0 no gma-miR4381_MIMAT0018288_Glycine_max_miR4381 blat blast caugugacugccuacaccaagu uugguguaggcaguuaaagugg uugguguaggcaguuaaagugguucgggaguuuaagcgggguaacuacucaugugacugccuacaccaagu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:5875077..5875148:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_103993 3.8 2 1 0 1 no bmo-miR-3325_MIMAT0015512_Bombyx_mori_miR-3325 blat blast gagugauggucgacguagcg gauacguugaccguugauugucggu gagugauggucgacguagcgaccgcggacuaccggcauuuaucccgacauucggucgauacguugaccguugauugucggu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:12688074..12688155:-
NW_025322640.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000120_whole_genome_shotgun_sequence_612720 3.8 63 63 0 0 no sko-miR-4831_MIMAT0020045_Saccoglossus_kowalevskii_miR-4831 blat blast uucggcaaauaauugaucuucu cggaucaauuauuugccucagc cggaucaauuauuugccucagcuuuagacuucggcaaauaauugaucuucu NW_025322640.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000120_whole_genome_shotgun_sequence:848508..848559:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_423700 3.8 82 82 0 0 no mmu-miR-669n_MIMAT0009427_Mus_musculus_miR-669n blat blast uuuuguguguuuauggacgucaa ggcucauaaaaacgcaaaaag uuuuguguguuuauggacgucaacuuugucuuggcucauaaaaacgcaaaaag NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:12877003..12877056:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_511950 3.8 22 22 0 0 no nta-miR6162_MIMAT0024777_Nicotiana_tabacum_miR6162 blat blast ugaaaaauuaaaacuagacuguu caguccaguuuuaauuuuucaca caguccaguuuuaauuuuucacaguccaguuuugaaaaauuaaaacuagacuguu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:21111175..21111230:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_170323 3.8 41 41 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggcucuaaacaccaggaa cagaggcucuaaacaccaggaaaagccaggaaaagagccucugcu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:21311442..21311487:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_204811 3.8 28 24 0 4 no bta-miR-10162-5p_MIMAT0040909_Bos_taurus_miR-10162-5p blat blast aggacaggaguguugugugaca ugucgugcaauacuccucuccacu ugucgugcaauacuccucuccacuuaaaagaggacaggaguguugugugaca NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:7228371..7228423:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_486211 3.8 167 166 0 1 no oni-miR-10783_MIMAT0043292_Oreochromis_niloticus_miR-10783 blat blast cccguugaaguccugacuuuu agggcuucaacaggguuuga agggcuucaacaggguuugaacugugaccccguugaaguccugacuuuu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:9329094..9329143:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_385579 3.8 31 27 0 4 no hsa-miR-216a-5p_MIMAT0000273_Homo_sapiens_miR-216a-5p blat blast aaaucucagaccucggccuug gccucggucugagauuuca aaaucucagaccucggccuugauguaucauuaaggccucggucugagauuuca NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:9307775..9307828:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_178263 3.8 101 101 0 0 no osa-miR6245b-3p_MIMAT0044649_Oryza_sativa_miR6245b-3p blat blast auauaggugcucggugacuagu cagucacagagccgcuauauuu auauaggugcucggugacuaguuucgaaaccagucacagagccgcuauauuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:2905273..2905325:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_125324 3.8 62 62 0 0 no lja-miR7537_MIMAT0029363_Lotus_japonicus_miR7537 blat blast aaggaaauguagaaaacacgagc gaguguuuugugcauuuuuugag aaggaaauguagaaaacacgagccauaggcgaguguuuugugcauuuuuugag NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:2719947..2720000:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_100632 3.7 41 41 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggcucuaaacaccaggaa cagaggcucuaaacaccaggaaaagccaggaaaagagccucugcu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:7467847..7467892:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_325041 3.7 563 549 0 14 no ssc-miR-9860-5p_MIMAT0037079_Sus_scrofa_miR-9860-5p blat blast augcccgaguuguagcggccuccg cacaggcugcccucgggu cacaggcugcccucgggugacccgcuuacuuucgcgggaugcccgaguuguagcggccuccg NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:7789764..7789826:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_328676 3.7 1359909 1354598 0 5311 no pbv-miR-1329-3p_MIMAT0039076_Python_bivittatus_miR-1329-3p blat blast ucccguagauccgaacuugu acaaguucgucucuaugguuu ucccguagauccgaacuuguggguuuucuuccacaaguucgucucuaugguuu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:12437102..12437155:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_149411 3.7 138 138 0 0 no sfv-miR-S3-5p_MIMAT0040976_Simian_foamy_miR-S3-5p blat blast cagggaguaaucggacgagug cgggcacgauuuccccugaa cagggaguaaucggacgagugauuucaaaucagccgagcgcauagcucgaggaugauuugaaacuacgggcacgauuuccccugaa NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:13409281..13409367:-
NW_025322668.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000172_whole_genome_shotgun_sequence_642486 3.7 5 4 0 1 no ppy-miR-647_MIMAT0016081_Pongo_pygmaeus_miR-647 blat blast guggcuccuccugaaauguucu uacgauuuaauggagccgaaacg guggcuccuccugaaauguucuacaguugguauacgauuuaauggagccgaaacg NW_025322668.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000172_whole_genome_shotgun_sequence:222474..222529:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_85261 3.7 12 10 0 2 no bmo-miR-3409_MIMAT0015615_Bombyx_mori_miR-3409 blat blast ggaacaagccgaaacauu aauguuuugguuuguucccg aauguuuugguuuguucccgaaaacgggaacaagccgaaacauu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:26663286..26663330:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_122564 3.7 98 98 0 0 no osa-miR2871a-5p_MIMAT0020948_Oryza_sativa_miR2871a-5p blat blast uaccguaggaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguaccguaggaaaaggcucugcu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:36066607..36066658:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_10650 3.7 15 12 0 3 no hsa-miR-1294_MIMAT0005884_Homo_sapiens_miR-1294 blat blast ugugaggugauaguugauucggcc ucaucaacuaucaccucguaga ugugaggugauaguugauucggccuuuggccucaucaacuaucaccucguaga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:12679204..12679257:+
NW_025322628.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000086_whole_genome_shotgun_sequence_593121 3.7 203 203 0 0 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg gaguugacuaucgcucguaca uacgagcagauagucaacgaggcgcagccgaguugacuaucgcucguaca NW_025322628.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000086_whole_genome_shotgun_sequence:1105419..1105469:+
NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence_674926 3.7 41 41 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggcucuaaacaccaggaa cagaggcucuaaacaccaggaaaagccaggaaaagagccucugcu NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence:968809..968854:-
NW_025322668.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000172_whole_genome_shotgun_sequence_642426 3.7 5 4 0 1 no ppy-miR-647_MIMAT0016081_Pongo_pygmaeus_miR-647 blat blast guggcuccuccugaaauguucu uacgauuuaauggagccgaaacg guggcuccuccugaaauguucuacaguugguauacgauuuaauggagccgaaacg NW_025322668.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000172_whole_genome_shotgun_sequence:95699..95754:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_298825 3.7 12 12 0 0 no mmu-miR-692_MIMAT0003471_Mus_musculus_miR-692 blat blast uucucuuuaaccgcuuugcgacc ucgcgaagccgcgagagagaaaa ucgcgaagccgcgagagagaaaaauccuuuuucucuuuaaccgcuuugcgacc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23606675..23606728:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_326075 3.7 13 13 0 0 no dme-miR-7-3p_MIMAT0020790_Drosophila_melanogaster_miR-7-3p blat blast uaauaaauuaacuaccugugug cacagguaauuaauuaauuaau cacagguaauuaauuaauuaauaauuaauaaauuaacuaccugugug NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:8828300..8828347:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_167414 3.7 401 401 0 0 no oan-miR-1367-5p_MIMAT0007031_Ornithorhynchus_anatinus_miR-1367-5p blat blast uugguagagagaaaugacaaaa uuuauuuuucucucuaccaaca uugguagagagaaaugacaaaauuuuuauuuuucucucuaccaaca NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:16979401..16979447:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_311361 3.7 42 42 0 0 no sme-miR-2167_MIMAT0011264_Schmidtea_mediterranea_miR-2167 blat blast cguguuaaacagucauccuacgu ccgggauaacuguuugacacuuu cguguuaaacagucauccuacguuuaaaugauccgggauaacuguuugacacuuu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:15264453..15264508:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_385500 3.7 16 16 0 0 no ppt-miR1041_MIMAT0005151_Physcomitrella_patens_miR1041 blat blast cuuucgggcuacggguga auccguggcccuugaggg cuuucgggcuacgggugaauagcccaugaggcgaaaccgauccguggcccuugaggg NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:9234172..9234229:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_325079 3.7 557 549 0 8 no ssc-miR-9860-5p_MIMAT0037079_Sus_scrofa_miR-9860-5p blat blast augcccgaguuguagcggccuccg gcugcccucgggugacccgcu gcugcccucgggugacccgcuuacuuucgcgggaugcccgaguuguagcggccuccg NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:7833101..7833158:+
NW_025322815.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000156_whole_genome_shotgun_sequence_702047 3.7 13 13 0 0 no dme-miR-7-3p_MIMAT0020790_Drosophila_melanogaster_miR-7-3p blat blast uaauaaauuaacuaccugugug cacagguaguuaauuaauuaau cacagguaguuaauuaauuaauaauuaauaaauuaacuaccugugug NW_025322815.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000156_whole_genome_shotgun_sequence:175920..175967:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_483299 3.7 15 15 0 0 no cin-miR-4077a-5p_MIMAT0016642_Ciona_intestinalis_miR-4077a-5p blat blast uaguuggacaggucaaaucaga cgauuugacccguccaauuaca cgauuugacccguccaauuacacauguuuguaguuggacaggucaaaucaga NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:5291371..5291423:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_61677 3.7 5 3 1 1 no gga-miR-6690-5p_MIMAT0025796_Gallus_gallus_miR-6690-5p blat blast acagaagguggucagaaug ugucuguccacugucugugcuuagu acagaagguggucagaaugguagaucuccuguuaaggaaaacgcugcaacauugauugucuguccacugucugugcuuagu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:32037862..32037943:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_125469 3.7 15 15 0 0 no gga-miR-1574-5p_MIMAT0007434_Gallus_gallus_miR-1574-5p blat blast uugugacuugaacuuugcguuaa gacgcaaaguucaagucacaauu gacgcaaaguucaagucacaauuauuuaauugugacuugaacuuugcguuaa NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:2878781..2878833:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_114701 3.7 3628 3620 0 8 no hsa-miR-33a-3p_MIMAT0004506_Homo_sapiens_miR-33a-3p blat blast aaauguuucggcuuguucccg aacaaaccaaaacauuuuacucu aaauguuucggcuuguucccguuuucgggaacaaaccaaaacauuuuacucu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:26663279..26663331:-
NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence_557056 3.7 49 39 0 10 no dre-miR-430c-5p_MIMAT0031929_Danio_rerio_miR-430c-5p blat blast cacuucaauucauggcccuu uugggucauaaauugaagugga cacuucaauucauggcccuugugcuuugcaauugggucauaaauugaagugga NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence:791977..792030:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_479738 3.7 203 203 0 0 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg gaguugacuaucacucauaga uacgagcagauagucaacgaggcgcagcugaguugacuaucacucauaga NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:23184596..23184646:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_325071 3.7 557 549 0 8 no ssc-miR-9860-5p_MIMAT0037079_Sus_scrofa_miR-9860-5p blat blast augcccgaguuguagcggccuccg gcugcccucgggugacccgcu gcugcccucgggugacccgcuuacuuucgcgggaugcccgaguuguagcggccuccg NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:7822560..7822617:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_299838 3.6 16 16 0 0 no cre-miR1152_MIMAT0005397_Chlamydomonas_reinhardtii_miR1152 blat blast gaagaagguuuagaaaggcucu agccuuccuaaaccuucuucuc agccuuccuaaaccuucuucuccuugagcacaggaagaagguuuagaaaggcucu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:757844..757899:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_520413 3.6 38 38 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggucucuuuucucccgu cagaggucucuuuucucccguuaccgaacaccaggaaaagagccucugcu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:9256904..9256954:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_55202 3.6 47 47 0 0 no tur-miR-263b-3p_MIMAT0023109_Tetranychus_urticae_miR-263b-3p blat blast uuggguucggcacaugagugg gcucuaaagucgaaccuaauu gcucuaaagucgaaccuaauucaauuggguucggcacaugagugg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:27253906..27253951:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_250702 3.6 42 42 0 0 no sme-miR-2167_MIMAT0011264_Schmidtea_mediterranea_miR-2167 blat blast cguguuaaacagucauccuacgu ccaggauaaguguuugacaccua cguguuaaacagucauccuacguuuaaaggauccaggauaaguguuugacaccua NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:1351742..1351797:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_70265 3.6 13 13 0 0 no xla-miR-93-3p_MIMAT0046614_Xenopus_laevis_miR-93-3p blat blast ccugcaugcacucuuuuuaaua uuaaaaagggugcaugcaagca uuaaaaagggugcaugcaagcacgaauaugccugcaugcacucuuuuuaaua NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:4835202..4835254:+
NW_025322640.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000120_whole_genome_shotgun_sequence_612122 3.6 203 203 0 0 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgagg gaguugacuaucccucguaga uacgagcagauagucaacgaggcgcagccgaguugacuaucccucguaga NW_025322640.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000120_whole_genome_shotgun_sequence:828523..828573:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_405860 3.6 22 22 0 0 no mmu-miR-1199-5p_MIMAT0005860_Mus_musculus_miR-1199-5p blat blast ucugagucaauagcccauucggc cucauuggcuauugacucauagc ucugagucaauagcccauucggccgucggccucauuggcuauugacucauagc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:14446364..14446417:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_9481 3.6 15 14 1 0 no gma-miR1508b_MIMAT0010081_Glycine_max_miR1508b blat blast aagaaagguccuaagaacgagguu ccucguucccaggacuucucccuu ccucguucccaggacuucucccuuggcuuuuagguuagggccccagcugaaaagucaaaagaaagguccuaagaacgagguu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:10770775..10770857:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_126437 3.6 240 240 0 0 no cin-miR-4064-3p_MIMAT0016617_Ciona_intestinalis_miR-4064-3p blat blast gacaaccggaaauacgucu gcuacguuuucggcggaguu gcuacguuuucggcggaguuacuuuucgggcggagagaagcgacaaccggaaauacgucu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:4242715..4242775:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_281450 3.6 11 9 1 1 no bdi-miR7707-5p_MIMAT0030131_Brachypodium_distachyon_miR7707-5p blat blast uuucagcccgggaugaaacu aggccggucugaaauuucagc aggccggucugaaauuucagcccgguuagccgggcugaaauuucagcccgggaugaaacu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:4695571..4695631:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_188075 3.6 26 26 0 0 no dps-miR-2518_MIMAT0012301_Drosophila_pseudoobscura_miR-2518 blat blast acgagcagauagucaacgagg gagucaacuaucgcucguag acgagcagauagucaacgaggcgcagccgagucaacuaucgcucguag NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:15579152..15579200:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_534353 3.6 47 47 0 0 no gga-miR-6552-3p_MIMAT0025612_Gallus_gallus_miR-6552-3p blat blast aaacaagaaaugggauuggcucu agccaaucagauuucuuguauag aaacaagaaaugggauuggcucuuuuuuaaaagagccaaucagauuucuuguauag NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:6078324..6078380:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_431298 3.6 43 43 0 0 no ppy-miR-1270_MIMAT0016194_Pongo_pygmaeus_miR-1270 blat blast guggagagaugaaagacccugg agggucuuucuucccucgcuc agggucuuucuucccucgcucccuuugggguggagagaugaaagacccugg NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:4238897..4238948:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17321 3.6 43 43 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggucucuuuucucccguc cagaggucucuuuucucccgucagcaaacaccaggaaaagagccucugcu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20327832..20327882:+
NW_025323108.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000539_whole_genome_shotgun_sequence_730838 3.6 185 179 6 0 no cin-miR-4142-3p_MIMAT0016743_Ciona_intestinalis_miR-4142-3p blat blast uuuucagaugacguucucgcu ggaaaaggucacuuaaaaua uuuucagaugacguucucgcuuucgucgacgugguguuugcuuaagcucccuaauagggagcuuuagcaaugacgacgacaacggcaaggaaaaggucacuuaaaaua NW_025323108.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000539_whole_genome_shotgun_sequence:58497..58605:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_148658 3.6 178 178 0 0 no mmu-miR-3069-3p_MIMAT0014845_Mus_musculus_miR-3069-3p blat blast uuggacaccuguaauuggaua uccaguuaaagcuguccaauu uccaguuaaagcuguccaauuugaacuuuuugcaauuggacaccuguaauuggaua NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:12945435..12945491:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_366211 3.6 46 42 0 4 no sme-miR-2204-5p_MIMAT0011398_Schmidtea_mediterranea_miR-2204-5p blat blast ugaaauuacucgcccgauuacu ugaucgugcucguaauuucaaa ugaucgugcucguaauuucaaaucggcuucgcgcuucgcguucgacugauuuugaaauuacucgcccgauuacu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:5307307..5307381:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_206576 3.6 75 73 0 2 no gga-miR-12275-3p_MIMAT0050045_Gallus_gallus_miR-12275-3p blat blast uacgagcagauagucaacgaag ccgaguugacuaucgcucguagaa uacgagcagauagucaacgaagcacagccgaguugacuaucgcucguagaa NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:9277221..9277272:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_19118 3.6 39 39 0 0 no lja-miR7537_MIMAT0029363_Lotus_japonicus_miR7537 blat blast aaggaaauguagaaaacacaagu gaguguuuucugcauuucucaag aaggaaauguagaaaacacaagucucaggcgaguguuuucugcauuucucaag NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:22942573..22942626:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_462498 3.6 9 7 0 2 no blat blast uuauuggacaggucaaauu uuuggccugucugauuacaaacgu uuuggccugucugauuacaaacguuuguaauaauuacaauuauuggacaggucaaauu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:2014966..2015024:-
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_553308 3.6 10 5 5 0 no aca-miR-5407-5p_MIMAT0022022_Anolis_carolinensis_miR-5407-5p blat blast uuucggaucauggugcaucaga ugaugcauaaugauccgaaaga uuucggaucauggugcaucagaggaaccgaagaauccacuuccagacuggauucuucgguuccucugaugcauaaugauccgaaaga NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:1805613..1805700:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_206341 3.5 13 13 0 0 no xla-miR-93-3p_MIMAT0046614_Xenopus_laevis_miR-93-3p blat blast ccugcaugcacucuuuuuaaua uuaaaaagagcgcaugcaagca uuaaaaagagcgcaugcaagcaugaauaugccugcaugcacucuuuuuaaua NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:9077743..9077795:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_175717 3.5 13 13 0 0 no csi-miR12107-5p_MIMAT0048971_Citrus_sinensis_miR12107-5p blat blast uugaugagacuauuaauuuuu caauuaauagucucaucaaua caauuaauagucucaucaauaauaauuauugaugagacuauuaauuuuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:28202064..28202113:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_495137 3.5 3 2 0 1 no mmu-miR-6408_MIMAT0025161_Mus_musculus_miR-6408 blat blast uacauggguggaaacaagaagg uuucuugauuccuuccaugu uuucuugauuccuuccauguagauuaaauuaguggguugauacauggguggaaacaagaagg NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:20481217..20481279:+
NW_025322651.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000141_whole_genome_shotgun_sequence_626227 3.5 56 56 0 0 no hsa-miR-554_MIMAT0003217_Homo_sapiens_miR-554 blat blast ucuagucccacagagagccugcu cugguucccugggggacuauauu cugguucccugggggacuauauuccacccuguucuagucccacagagagccugcu NW_025322651.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000141_whole_genome_shotgun_sequence:604628..604683:+
NW_025322877.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000226_whole_genome_shotgun_sequence_714841 3.5 13 13 0 0 no xla-miR-93-3p_MIMAT0046614_Xenopus_laevis_miR-93-3p blat blast ccugcaugcacucuuuuuaaua uuaaaaagagcgcaugcaagca uuaaaaagagcgcaugcaagcaugaauaugccugcaugcacucuuuuuaaua NW_025322877.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000226_whole_genome_shotgun_sequence:41195..41247:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_32128 3.5 4 3 0 1 no pta-miR159a_MIMAT0004990_Pinus_taeda_miR159a blat blast guggauugccauaggcgc guuuauuguggucguucugauu guggauugccauaggcgcagcuaucauaggcgcguuuauuguggucguucugauu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:37309499..37309554:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_219979 3.5 34 34 0 0 no hme-miR-6306-5p_MIMAT0025012_Heliconius_melpomene_miR-6306-5p blat blast uuagguucggcacaugagugg gcucuuuugccggaccuaauu gcucuuuugccggaccuaauucaucaauuagguucggcacaugagugg NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:24944382..24944430:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_176562 3.5 34 34 0 0 no bfl-miR-2065_MIMAT0009993_Branchiostoma_floridae_miR-2065 blat blast aggcagagaggagagauccugg agggucucuguuccaaugacuaag agggucucuguuccaaugacuaagggaggcagagaggagagauccugg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:499071..499119:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_511128 3.5 3 2 0 1 no mmu-miR-6408_MIMAT0025161_Mus_musculus_miR-6408 blat blast uacauggguggaaacaagaagg uuucuugauuccuuccaugu uuucuugauuccuuccauguagauuaaauuaguggguugauacauggguggaaacaagaagg NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:20094519..20094581:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_128148 3.5 88 88 0 0 no osa-miR5543_MIMAT0022179_Oryza_sativa_miR5543 blat blast caugaaugacguaaaugagggu cuucauccacauuauucgca caugaaugacguaaaugaggguugccuggcaaccuucauccacauuauucgca NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:6608456..6608509:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_263461 3.5 36 36 0 0 no mmu-miR-6959-5p_MIMAT0027818_Mus_musculus_miR-6959-5p blat blast agggaaacgaucccugagaacg uuuccagggcuuuuuuccacca uuuccagggcuuuuuuccaccauuuagucagugagggaaacgaucccugagaacg NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:19602008..19602063:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_254014 3.5 24 22 0 2 no bma-miR-9514_MIMAT0037507_Brugia_malayi_miR-9514 blat blast caaaaagagaacucggccaa uuggccucguucuccuuuugca uuggccucguucuccuuuugcaucuuuauggaccucgacuuugucucgguacauaaaaacgcaaaaagagaacucggccaa NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:6231729..6231810:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_230372 3.4 82 82 0 0 no mmu-miR-3069-5p_MIMAT0014844_Mus_musculus_miR-3069-5p blat blast uuggcaguuucucaucgagu uugaugaaaaagugucaaua uugaugaaaaagugucaauaguuguuauuggcaguuucucaucgagu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:7404299..7404346:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_408878 3.4 8473 8437 0 36 no asu-miR-250-5p_MIMAT0021507_Ascaris_suum_miR-250-5p blat blast ucuggcaguauguuauuuuuc gaauguaagauacugccaugca gaauguaagauacugccaugcauuuagugucuggcaguauguuauuuuuc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:19537880..19537930:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_6861 3.4 21 21 0 0 no tca-miR-3809-5p_MIMAT0018640_Tribolium_castaneum_miR-3809-5p blat blast uucauaacugcaaggauaau gauccuugccuguuaugaacg gauccuugccuguuaugaacgcaacuguaacauucauaacugcaaggauaau NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:6680562..6680614:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_534343 3.4 47 47 0 0 no gga-miR-6552-3p_MIMAT0025612_Gallus_gallus_miR-6552-3p blat blast aaacaagaaaugggauuggcucu agccaaucagauuucuuguauag aaacaagaaaugggauuggcucuuucaggagccaaucagauuucuuguauag NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:6051882..6051934:-
NW_025323112.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000549_whole_genome_shotgun_sequence_732756 3.4 14 14 0 0 no hsa-miR-1180-3p_MIMAT0005825_Homo_sapiens_miR-1180-3p blat blast auuccggcuauucugcug gcagaauagucggaauac auuccggcuauucugcugccaggagcagaauagucggaauac NW_025323112.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000549_whole_genome_shotgun_sequence:330937..330979:+
NW_025322832.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000179_whole_genome_shotgun_sequence_706422 3.4 13 13 0 0 no mmu-miR-1946b_MIMAT0009443_Mus_musculus_miR-1946b blat blast cccgggcauuuggacuuuuga aaaccuccgacucuucccgggca aaaccuccgacucuucccgggcaaagcccgggcauuuggacuuuuga NW_025322832.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000179_whole_genome_shotgun_sequence:161074..161121:-
NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence_567404 3.4 73 47 26 0 no efu-miR-9339_MIMAT0035103_Eptesicus_fuscus_miR-9339 blat blast aagauugaaauggcgcgcgacu ucuccucccuguuucgccuaugu aagauugaaauggcgcgcgacuggcuuggacgcaucuguguuguuuuguucugcgucucguaggugcucgcggaagcgguccgccagucuccucccuguuucgccuaugu NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence:656691..656801:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_458614 3.4 26 26 0 0 no oan-miR-1346_MIMAT0006919_Ornithorhynchus_anatinus_miR-1346 blat blast guggguuggaaggguaggaacaca uguaccucuuguccuucuugaaccacag guggguuggaaggguaggaacacaagaaagggagagcacccacuccucccuucuuagucccaguguaccucuuguccuucuugaaccacag NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:20428767..20428858:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_63339 3.4 63 63 0 0 no prd-miR-7959a-3p_MIMAT0030809_Panagrellus_redivivus_miR-7959a-3p blat blast ucuuugcauuuuuauggaccucag uccguccauaaaaacgcaaaaaga ucuuugcauuuuuauggaccucagcuuugucuccguccauaaaaacgcaaaaaga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:34063205..34063260:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_477637 3.4 26 26 0 0 no oan-miR-1346_MIMAT0006919_Ornithorhynchus_anatinus_miR-1346 blat blast guggguuggaaggguaggaacaca uguaccucuuguccuucuugaaccacag guggguuggaaggguaggaacacaagaaagggagagcacccacuccucccuucuuagucccaguguaccucuuguccuucuugaaccacag NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:20281331..20281422:-
NW_025322696.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000213_whole_genome_shotgun_sequence_655537 3.4 16 16 0 0 no bta-miR-2882_MIMAT0013840_Bos_taurus_miR-2882 blat blast agcccgggcugaaauucacc aguauuucagccaggugggcgga aguauuucagccaggugggcggagagaaauuucagcccgggcugaaauucacc NW_025322696.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000213_whole_genome_shotgun_sequence:225935..225988:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_527745 3.4 11 5 0 6 no bdi-miR7762-3p_MIMAT0030271_Brachypodium_distachyon_miR7762-3p blat blast uucggaaugucacgcaacgu cguugcgugacaucccgaa uucggaaugucacgcaacguucguugcgugacaucccgaa NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:14761924..14761964:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17546 3.4 18 18 0 0 no ami-miR-P-novel-27-5p_Acropora_millepora_Praher_et_al._2021_NA blat blast uagcgagaaaggggcugaacauuu cuguucaggccuuucuugcuacu uagcgagaaaggggcugaacauuuagucaaaacuguucaggccuuucuugcuacu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20723396..20723451:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_5882 3.4 54 45 0 9 no aly-miR3434-5p_MIMAT0017697_Arabidopsis_lyrata_miR3434-5p blat blast ucugauucaguagccuauuc ucaugggcuauugacucaaagc ucugauucaguagccuauucaggcuuuggccucaugggcuauugacucaaagc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:5021159..5021212:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_430675 3.4 20 20 0 0 no hsa-miR-3123_MIMAT0014985_Homo_sapiens_miR-3123 blat blast aagagaaucuuccaagcugucg acagauuggaggauucucauua aagagaaucuuccaagcugucguucugagcuacagauuggaggauucucauua NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:3213395..3213448:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17530 3.4 18 18 0 0 no ami-miR-P-novel-27-5p_Acropora_millepora_Praher_et_al._2021_NA blat blast uagcgagaaaggggcugaacauuu cuguucaggccuuucucgcuacu uagcgagaaaggggcugaacauuuagucaaaacuguucaggccuuucucgcuacu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20686918..20686973:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_365798 3.3 23 23 0 0 no hsa-miR-30b-3p_MIMAT0004589_Homo_sapiens_miR-30b-3p blat blast augggaggauguggaaug uucccgucuguuuuc uucccgucuguuuucagaaguccugguggacagggcuagaucuggaugggaggauguggaaug NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:4605692..4605755:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_251152 3.3 2 1 0 1 no crm-miR-2231-5p_MIMAT0011631_Caenorhabditis_remanei_miR-2231-5p blat blast gacggcaaacgguaaaccu guuugccguuugccguaaa gacggcaaacgguaaaccucaaaccgcuagcagccguuugccguuugccguaaa NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:2028876..2028930:+
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_606983 3.3 20 20 0 0 no rno-miR-3575_MIMAT0017861_Rattus_norvegicus_miR-3575 blat blast ccugcuggcgauuuugacaacu uggucaaaaucgcaaacuaggc uggucaaaaucgcaaacuaggcuuugcauugcccugcuggcgauuuugacaacu NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:631757..631811:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_233345 3.3 40 39 0 1 no hsa-miR-510-3p_MIMAT0026613_Homo_sapiens_miR-510-3p blat blast uuugaaacucuuuggaaacccuuuu uuuuuaggggguuugaggucgcucu uuuuuaggggguuugaggucgcucugaaaccuuuuggaaacccgguuucagaggguuugaaacucuuuggaaacccuuuu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:11195753..11195833:-
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_607041 3.3 20 20 0 0 no rno-miR-3575_MIMAT0017861_Rattus_norvegicus_miR-3575 blat blast ccugcuggcgauuuugacaacu uggucaaaaucgcaaacuaggc uggucaaaaucgcaaacuaggcuuugcauugcccugcuggcgauuuugacaacu NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:766434..766488:+
NW_025323227.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000678_whole_genome_shotgun_sequence_758571 3.3 37 35 1 1 no bta-miR-6529a_MIMAT0025565_Bos_taurus_miR-6529a blat blast gagagauccagcuggugacugagcc gguucguggucaugggagaagcuuu gguucguggucaugggagaagcuuucggccguucguagcaaaucgugugggagagauccagcuggugacugagcc NW_025323227.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000678_whole_genome_shotgun_sequence:29292..29367:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_77268 3.3 3 2 0 1 no mmu-miR-7084-5p_MIMAT0028074_Mus_musculus_miR-7084-5p blat blast cagaggauuaucuagcuacu aagcuuagcuuuagaccuguggu cagaggauuaucuagcuacuggauuuuacgagcagcagauccuagcaagcuuagcuuuagaccuguggu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:15370125..15370194:+
NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence_570881 3.3 83 47 36 0 no efu-miR-9339_MIMAT0035103_Eptesicus_fuscus_miR-9339 blat blast aagauugaaauggcgcgcgacu ucuccucccuguuucgccuaugu aagauugaaauggcgcgcgacuggcuuggacgcaucuguguuguuuuguucugcgucucguagguguucgcggaagcgguccgccagucuccucccuguuucgccuaugu NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence:659818..659928:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_165404 3.3 27 27 0 0 no hme-miR-6306-5p_MIMAT0025012_Heliconius_melpomene_miR-6306-5p blat blast uuagguucggcacaugagu uuaaccgggccuaaga uuagguucggcacaugagugaagcggcgucuuaaccgggccuaaga NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:15015558..15015604:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_187258 3.3 7 4 0 3 no blat blast agcucucaugaucuuuguuuga caaacaaagaucaugagagcugca caaacaaagaucaugagagcugcaauccgcagcucucaugaucuuuguuuga NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:14834776..14834828:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_544008 3.3 47 47 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggucucuuuuuacccgu cagaggucucuuuuuacccgucagcaaacaccaggaaaagagccucugcu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:13006752..13006802:-
NW_025322627.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000080_whole_genome_shotgun_sequence_592196 3.3 37 35 1 1 no bta-miR-6529a_MIMAT0025565_Bos_taurus_miR-6529a blat blast gagagauccagcuggugacugagcc gguucguggucaugggagaagcuuu gguucguggucaugggagaagcuuucggccguucguagcaaaucgugugggagagauccagcuggugacugagcc NW_025322627.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000080_whole_genome_shotgun_sequence:271457..271532:-
NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence_558453 3.3 13 13 0 0 no hsa-miR-6790-3p_MIMAT0027481_Homo_sapiens_miR-6790-3p blat blast ugaccucgguuuugauaauuca aauuaucaaacccucgugucugu aauuaucaaacccucgugucuguguuaucugaccucgguuuugauaauuca NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence:845780..845831:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_396087 3.3 10 9 1 0 no hsa-miR-192-5p_MIMAT0000222_Homo_sapiens_miR-192-5p blat blast uugaccuaguuuacuugcuuga aagcaaguaaaguaaguuaagc uugaccuaguuuacuugcuugaaguaggucaagcaaguaaaguaaguuaagcaaguaaaguaaguuaagc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:1361097..1361167:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_134431 3.3 10 9 1 0 no gma-miR1516a-3p_MIMAT0007375_Glycine_max_miR1516a-3p blat blast aaaaagagaacucggccagua uuggccacguucuguuuuugc uuggccacguucuguuuuugcguuuuauggaccucgacuucgucucgguccauaacaacgcaaaaagagaacucggccagua NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:14077085..14077167:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_147160 3.3 39 39 0 0 no tgu-miR-2981_MIMAT0014491_Taeniopygia_guttata_miR-2981 blat blast ucgggccgcaaaugacacuacg uaguaucauuugcggcccucgc uaguaucauuugcggcccucgcacuucacguucgggccgcaaaugacacuacg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:11625251..11625304:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_423561 3.3 37 35 1 1 no bta-miR-6529a_MIMAT0025565_Bos_taurus_miR-6529a blat blast gagagauccagcuggugacugagcc gguucguggucaugggagaagcuuu gguucguggucaugggagaagcuuucggccguucguagcaaaucgugugggagagauccagcuggugacugagcc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:12501182..12501257:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_216355 3.3 37 35 1 1 no bta-miR-6529a_MIMAT0025565_Bos_taurus_miR-6529a blat blast gagagauccagcuggugacugagcc gguucguggucaugggagaagcuuu gguucguggucaugggagaagcuuucggccguucguagcaaaucgugugggagagauccagcuggugacugagcc NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:20148419..20148494:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_175676 3.3 17 17 0 0 no dme-miR-2489-3p_MIMAT0012196_Drosophila_melanogaster_miR-2489-3p blat blast uauuguauacuggaccgaggu uucgguccaauauaccguaua uauuguauacuggaccgagguauauuggacccuucgguccaauauaccguaua NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:28073905..28073958:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_23191 3.3 13 13 0 0 no hsa-miR-6790-3p_MIMAT0027481_Homo_sapiens_miR-6790-3p blat blast ugaccucgguuuugauaauuca aauuaucaaacccucgugucugu aauuaucaaacccucgugucuguguuaucugaccucgguuuugauaauuca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:26601702..26601753:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_266854 3.2 48 48 0 0 no ebv-miR-BART15_MIMAT0003713_Epstein_Barr_miR-BART15 blat blast gucaguggcuucauagcug gugagagcgucacugguau gucaguggcuucauagcugaguuggugagagcgucacugguau NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:5152983..5153026:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_325144 3.2 22 22 0 0 no gsa-miR-9399-3p_MIMAT0035345_Gyrodactylus_salaris_miR-9399-3p blat blast ugguguaccuguaguuuauuuu aauuaauuccauguacaccguu ugguguaccuguaguuuauuuuuuacaaaauuaauuccauguacaccguu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:7867245..7867295:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_373732 3.2 18 18 0 0 no ath-miR866-5p_MIMAT0004315_Arabidopsis_thaliana_miR866-5p blat blast acaaggaaaaauugcucgugu acgagcaaugccucccugaca acgagcaaugccucccugacacauuugccuuaacaaggaaaaauugcucgugu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:14740218..14740271:-
NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence_558457 3.2 13 13 0 0 no hsa-miR-6790-3p_MIMAT0027481_Homo_sapiens_miR-6790-3p blat blast ugaccucgguuuugauaauuca aauuaucaaacccucgugucuuu aauuaucaaacccucgugucuuuuaucugaccucgguuuugauaauuca NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence:849228..849277:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_302778 3.2 70 70 0 0 no tcf-miR-10299_MIMAT0041430_Triops_cancriformis_miR-10299 blat blast uucggcacaugaguggagcg cuccaaagucgaacc cuccaaagucgaaccuaauucaauuagauucggcacaugaguggagcg NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:4361891..4361939:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_71020 3.2 82 76 0 6 no osa-miR5825_MIMAT0023299_Oryza_sativa_miR5825 blat blast caaacaucuacugagcuua ucaacugguagagcacugc caaacaucuacugagcuuaucauaaugaccagcucccagcuggcuugauagcucaacugguagagcacugc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5963242..5963313:+
NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence_570022 3.2 270 270 0 0 no hvu-miR6213_MIMAT0024841_Hordeum_vulgare_miR6213 blat blast ucagauugcuggcuuuugauguuau gucgcagauggccagccugcac gucgcagauggccagccugcacagacucagauugcuggcuuuugauguuau NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence:470625..470676:-
NW_025322639.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000118_whole_genome_shotgun_sequence_610647 3.2 4 2 0 2 no tca-miR-3856-3p_MIMAT0018771_Tribolium_castaneum_miR-3856-3p blat blast ugugauuuaaaauggcugccguca uacgucacguugccaugggagcauuuucgc uacgucacguugccaugggagcauuuucgcugguucuaaacaaaccaacugugauuuaaaauggcugccguca NW_025322639.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000118_whole_genome_shotgun_sequence:553689..553762:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_504436 3.1 1373 1373 0 0 no bta-miR-2424_MIMAT0011993_Bos_taurus_miR-2424 blat blast ugaucuuucgucgcgugguugcucc gggcgucaugaccgguuacc gggcgucaugaccgguuacccgugaagguuuuugauaauuucuuccggaugaucuuucgucgcgugguugcucc NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:11166620..11166694:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_507915 3.1 26 26 0 0 no stu-miR5303f_MIMAT0030904_Solanum_tuberosum_miR5303f blat blast guuuuugguaaagugguggcucacu agggucuccugggcuuucaccagccau guuuuugguaaagugguggcucacuccauucuuccuggaggcacagggucuccugggcuuucaccagccau NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:15248923..15248994:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_436786 3.1 10 10 0 0 no mmu-miR-383-3p_MIMAT0017082_Mus_musculus_miR-383-3p blat blast ccacagcaagauguaguaggcu ccuacgacaucuugcuguugug ccuacgacaucuugcuguuguguuaaacaccacagcaagauguaguaggcu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:11450618..11450669:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_164553 3.1 69 69 0 0 no tcf-miR-10299_MIMAT0041430_Triops_cancriformis_miR-10299 blat blast uucggcacaugaguggagcg cuccaaagucgaacc cuccaaagucgaaccuaauucaauuaaguucggcacaugaguggagcg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:13816367..13816415:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_134723 3.1 348 347 0 1 no gga-miR-1643-3p_MIMAT0007519_Gallus_gallus_miR-1643-3p blat blast uaaaaguguuuugccaaguucu aaaacuuggcacaacauuu aaaacuuggcacaacauuuuuauaauuauuauaaaaguguuuugccaaguucu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:14592332..14592385:+
NW_025322641.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000121_whole_genome_shotgun_sequence_613822 3.1 13 13 0 0 no hsa-miR-6790-3p_MIMAT0027481_Homo_sapiens_miR-6790-3p blat blast ugaccucgguuuugauaauuca aauuauuaaacccucgugucugu aauuauuaaacccucgugucuguguuaucugaccucgguuuugauaauuca NW_025322641.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000121_whole_genome_shotgun_sequence:497902..497953:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_445029 3.1 14 14 0 0 no hma-miR-3005_MIMAT0014672_Hydra_magnipapillata_miR-3005 blat blast cugguggauugaguagguc ccuucuccuccuccucuaagug ccuucuccuccuccucuaagugucgccaggcuaugcgacugccuaguuccacugguggauugaguagguc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:5766757..5766827:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_77336 3.1 28 28 0 0 no dme-miR-2501-3p_MIMAT0012217_Drosophila_melanogaster_miR-2501-3p blat blast ucucuugcaacuugucuc cacaaguugcgcguugcg ucucuugcaacuugucucgcaauuuuguugcgacacaaguugcgcguugcg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:15476666..15476717:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_107324 3.1 4952 4951 0 1 no hsa-miR-1184_MIMAT0005829_Homo_sapiens_miR-1184 blat blast acugcagcuaaauacuccgc ucuuuagccgcaauauuua ucuuuagccgcaauauuuaugauacugcagcuaaauacuccgc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:16120353..16120396:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_24207 3.1 13 13 0 0 no mmu-miR-714_MIMAT0003505_Mus_musculus_miR-714 blat blast ugacgaggggcugacgcucg agcguaagcucuuuauauug agcguaagcucuuuauauugaccuauuuuucucuuuuuuucucugacgaggggcugacgcucg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:27675706..27675769:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_478802 3.1 80 80 0 0 no gga-miR-1643-3p_MIMAT0007519_Gallus_gallus_miR-1643-3p blat blast caaaagugucggaucccucuacc cagagaggaaacaccacuccgacagcc cagagaggaaacaccacuccgacagccugagaucaaggcaaaagugucggaucccucuacc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:22102753..22102814:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_27763 3.0 10 10 0 0 no dme-miR-2281-3p_MIMAT0011789_Drosophila_melanogaster_miR-2281-3p blat blast uaucuguauuuacucgaaauc uuucgaguaaaugcagaucga uuucgaguaaaugcagaucgaaaaaaaccgaguuaccguugaguacagcacaagauaauucgguuuucucuaucuguauuuacucgaaauc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:31426037..31426128:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_328206 3.0 21 20 0 1 no efu-miR-9273_MIMAT0034910_Eptesicus_fuscus_miR-9273 blat blast cacuauucacuggaugacucu guacucauccauuggguagggauu cacuauucacuggaugacucuauagauugugauaguacucauccauuggguagggauu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:11848206..11848264:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_115998 3.0 724 722 0 2 no osa-miR1854-3p_MIMAT0007776_Oryza_sativa_miR1854-3p blat blast uccaauuuuauauccagacaagu agccuggauauaaauuug agccuggauauaaauuugguguguuaagcaauuccaauuuuauauccagacaagu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:28823948..28824003:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_445065 3.0 14 14 0 0 no hma-miR-3005_MIMAT0014672_Hydra_magnipapillata_miR-3005 blat blast cugguggauugaguagguc caggcuauuccaccgccu caggcuauuccaccgccuaguuccacugguggauugaguagguc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:5833038..5833082:+
NW_025322774.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000084_whole_genome_shotgun_sequence_684088 3.0 11 11 0 0 no dre-miR-2187-5p_MIMAT0011296_Danio_rerio_miR-2187-5p blat blast auaauuaguagcuuccaccagg uggugaaaguuacuaauaauua uggugaaaguuacuaauaauuauuauuauaauaaaauuuuaauaauuaguagcuuccaccagg NW_025322774.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000084_whole_genome_shotgun_sequence:522305..522368:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_289702 3.0 24 24 0 0 no mmu-miR-1897-5p_MIMAT0007864_Mus_musculus_miR-1897-5p blat blast guuuggauugugaagggg aguucauggcagauuu guuuggauugugaaggggggaucggcggugcgugaccugucaacggcagagaagugcgugcccugggaaccaguucauggcagauuu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:12847866..12847953:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_473602 3.0 11 5 0 6 no ppe-miR7122b-3p_MIMAT0031530_Prunus_persica_miR7122b-3p blat blast ucguguuuucuguauuuccuuuguc cacucgagaaauguagaaaacacu cacucgagaaauguagaaaacacucgcuugcagcucguguuuucuguauuuccuuuguc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:14827821..14827880:-
NW_025323223.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000674_whole_genome_shotgun_sequence_758222 3.0 9 7 0 2 no osa-miR2090_MIMAT0010045_Oryza_sativa_miR2090 blat blast uacucugaguuucgcgccuaag gcgaaacucagaguaacaga uacucugaguuucgcgccuaagugcucgacagacagaacgucugucugacgagcgcuuaggagcgaaacucagaguaacaga NW_025323223.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000674_whole_genome_shotgun_sequence:46507..46589:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_321195 3.0 18 18 0 0 no ami-miR-P-novel-3-5p_Acropora_millepora_Praher_et_al._2021_NA blat blast uacaaaaauaagaugagu gcaucuuauuauuguaca gcaucuuauuauuguacaacccuuuuacggguuguacaaaaauaagaugagu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:3092482..3092534:+
NW_025322769.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000066_whole_genome_shotgun_sequence_679089 3.0 13 13 0 0 no cqu-miR-2941-1-5p_MIMAT0014434_Culex_quinquefasciatus_miR-2941-1-5p blat blast cgugguguagcucagcuc gcggguugcgguuggcacguu gcggguugcgguuggcacguugcaguggucaaggcuguuagcgugguguagcucagcuc NW_025322769.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000066_whole_genome_shotgun_sequence:566081..566140:+
NW_025322621.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000059_whole_genome_shotgun_sequence_572071 3.0 10 9 0 1 no gga-miR-1582_MIMAT0007443_Gallus_gallus_miR-1582 blat blast aaaagagaacucggccaaua gaccucguucucuuuuuacguuu gaccucguucucuuuuuacguuuuuaaaaagagaacucggccaaua NW_025322621.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000059_whole_genome_shotgun_sequence:81225..81271:-
NW_025322619.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000050_whole_genome_shotgun_sequence_561787 3.0 1333 1278 6 49 no lja-miR11155e-5p_MIMAT0043994_Lotus_japonicus_miR11155e-5p blat blast auuguaagcagcugcgcggagggau cuuggacgcaguggagaaaucagu cuuggacgcaguggagaaaucagugucaaagugaucggucgcagacgacauuguaagcagcugcgcggagggau NW_025322619.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000050_whole_genome_shotgun_sequence:913552..913626:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_121417 2.9 56 49 7 0 no ath-miR824-3p_MIMAT0032024_Arabidopsis_thaliana_miR824-3p blat blast ccuucucaggacuccaauc cuggacucugaagauggc cuggacucugaagauggcucugaggauggccuugacucugaagaucacagucagucgccaacaacaguccuuguccuucucaggacuccaauc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:34480977..34481070:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_495233 2.9 2 1 0 1 no sbi-miR5565d_MIMAT0022254_Sorghum_bicolor_miR5565d blat blast acuucaauucaugucccucuug uugggucauaaauugaagu acuucaauucaugucccucuugcuucacauuugggucauaaauugaagu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:20577498..20577547:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17322 2.9 43 43 0 0 no dme-miR-316-3p_MIMAT0020842_Drosophila_melanogaster_miR-316-3p blat blast ccaggaaaagagccucugcu cagaggucucuuuucucccguc cagaggucucuuuucucccgucagcaaacaccaggaaaagagccucugcu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20327832..20327882:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_275502 2.9 24 24 0 0 no gma-miR10446_MIMAT0041726_Glycine_max_miR10446 blat blast ucaacucauuugauagaaccaaauu uuugguuuuaucaaacgaguuggua uuugguuuuaucaaacgaguugguaaagguuguaaaaacaaauuuucacagugauaaucuaaacccuuaucaacucauuugauagaaccaaauu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:16466577..16466671:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_30306 2.9 53 53 0 0 no hsa-miR-890_MIMAT0004912_Homo_sapiens_miR-890 blat blast uacuuggacagagggaaacccu aguuacccucccucccugaguaga uacuuggacagagggaaacccuccuagaagaguuacccucccucccugaguaga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:34891347..34891401:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_515126 2.9 10 10 0 0 no hpo-miR-10087-5p_MIMAT0040737_Heligmosomoides_polygyrus_miR-10087-5p blat blast ucgauuuggccuguccgauugca uaauugggcaggucaaaucggac ucgauuuggccuguccgauugcaaauguucguaauugggcaggucaaaucggac NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:2751879..2751933:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_14477 2.9 21 21 0 0 no nvi-miR-263b_MIMAT0015703_Nasonia_vitripennis_miR-263b blat blast cuggcacugaacaaccgcu ccugggugcuaggu ccugggugcuaggugcacuuauauuucuugggccuggcacugaacaaccgcu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:17817003..17817055:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_14471 2.9 17 17 0 0 no tgu-miR-2995_MIMAT0014569_Taeniopygia_guttata_miR-2995 blat blast uggcacuggaaaaccgcu gauuuuuuuacuuuc gauuuuuuuacuuucgccggaagccugggugcuaggugcacuauuacuucuuggccuuggcacuggaaaaccgcu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:17815883..17815958:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_200949 2.9 23 23 0 0 no mmu-miR-7020-3p_MIMAT0027945_Mus_musculus_miR-7020-3p blat blast caccccuccccgcacaac ugguuuggcgacaggggcaga ugguuuggcgacaggggcagagccaccccuccccgcacaac NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:1729711..1729752:+
NW_025322774.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000084_whole_genome_shotgun_sequence_683448 2.8 20 16 0 4 no aae-miR-11920_MIMAT0046020_Aedes_aegypti_miR-11920 blat blast cccaucaaaacuuauaagu aauuauaacuuuugauggaaa cccaucaaaacuuauaaguagacugauaucuaauuauaacuuuugauggaaa NW_025322774.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000084_whole_genome_shotgun_sequence:297384..297436:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_431575 2.8 121 121 0 0 no oan-miR-7405-5p_MIMAT0028952_Ornithorhynchus_anatinus_miR-7405-5p blat blast uccaaggccuggguuaccacu gcuaggcccaaaccuucgguuc uccaaggccuggguuaccacuggccagcacaggaagaccagcagacaaagcuucaagugcagcuaggcccaaaccuucgguuc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:4668448..4668531:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_387566 2.8 35 35 0 0 no mmu-miR-669n_MIMAT0009427_Mus_musculus_miR-669n blat blast uuuuguguguuuauggaccucga ucaguccauaaacacacaaaaaa uuuuguguguuuauggaccucgacuuugccucaguccauaaacacacaaaaaa NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:11354729..11354782:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_253105 2.8 44 44 0 0 no bfl-miR-2065_MIMAT0009993_Branchiostoma_floridae_miR-2065 blat blast aggcagagaagagagaccaugg agggucucuguuccaacgac agggucucuguuccaacgacuaagggaggcagagaagagagaccaugg NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:5068144..5068192:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_152179 2.8 10 7 0 3 no gga-miR-6580-5p_MIMAT0025667_Gallus_gallus_miR-6580-5p blat blast ugaauugaccaccguaaagaga ucuuuacaguggucaauucaca ugaauugaccaccguaaagagauucgaaucucuuuacaguggucaauucaca NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:17403331..17403383:-
NW_025323217.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000667_whole_genome_shotgun_sequence_757938 2.8 17 17 0 0 no cin-miR-4155-3p_MIMAT0016760_Ciona_intestinalis_miR-4155-3p blat blast uauucucaaagucaggacgu ggccacggaucagugugaaucgg ggccacggaucagugugaaucgguccuccacacguaggaccuauucucaaagucaggacgu NW_025323217.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000667_whole_genome_shotgun_sequence:31230..31291:-
NW_025322671.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000176_whole_genome_shotgun_sequence_644159 2.8 1323 1268 6 49 no lja-miR11155e-5p_MIMAT0043994_Lotus_japonicus_miR11155e-5p blat blast auuguaaguagcugugcggagggau cuuggacgcaguggagaaaucagu cuuggacgcaguggagaaaucagugucaaagugaucggucgcagacgacauuguaaguagcugugcggagggau NW_025322671.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000176_whole_genome_shotgun_sequence:167692..167766:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_253974 2.8 30 26 4 0 no hco-miR-5967_MIMAT0023474_Haemonchus_contortus_miR-5967 blat blast cuucgugagccgcgacacuuggg cuuggcgacgagguucuucgugag cuuggcgacgagguucuucgugagcugcgacacuugggauacaauacacacacuaguucccuuggcgacgagguucuucgugagccgcgacacuuggg NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:6179910..6180008:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_183540 2.8 14 14 0 0 no hsa-miR-607_MIMAT0003275_Homo_sapiens_miR-607 blat blast uuucaaaugacugucgaa ugggugugccaugaagau ugggugugccaugaagauagagcuguuuucaaaugacugucgaa NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:10086611..10086655:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_165285 2.8 6 4 0 2 no blat blast agcucucaugaucuuuguuuga caaacaaagaucaugagagcug caaacaaagaucaugagagcugcggauugcagcucucaugaucuuuguuuga NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:14834777..14834829:+
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_552547 2.7 12 12 0 0 no hsa-miR-887-5p_MIMAT0026720_Homo_sapiens_miR-887-5p blat blast auugggaggaaauguguagagaca gcuccagcacugauaucaugccccaucac gcuccagcacugauaucaugccccaucacguggccacuguugccccauugggaggaaauguguagagaca NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:709942..710012:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_454285 2.7 12 12 0 0 no cel-miR-255-5p_MIMAT0020341_Caenorhabditis_elegans_miR-255-5p blat blast auaagaaauuguauggagcucu agcuucacucaacuucuuauac agcuucacucaacuucuuauacuuuuaguauaagaaauuguauggagcucu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:15378478..15378529:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_30308 2.7 10 9 0 1 no gma-miR5776_MIMAT0023181_Glycine_max_miR5776 blat blast uacuugggcagagggugacc aguuacccucccuccaugu uacuugggcagagggugacccuccuagaagaguuacccucccuccaugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:34892984..34893033:+
NW_025323209.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000659_whole_genome_shotgun_sequence_757288 2.7 23 23 0 0 no mmu-miR-23b-5p_MIMAT0016980_Mus_musculus_miR-23b-5p blat blast ggguuccuguagaucuccauguugg agauguuccugcauggucuug ggguuccuguagaucuccauguugguguccuucuugggcauuagauguuccugcauggucuug NW_025323209.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000659_whole_genome_shotgun_sequence:45962..46025:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_444633 2.7 48 48 0 0 no mml-miR-7192-3p_MIMAT0028343_Macaca_mulatta_miR-7192-3p blat blast guguuuuucugaggacga cuccuaagagaguccacgu cuccuaagagaguccacgugaccuuuggugaauccaaacgcgucuuguguuuuucugaggacga NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:5148123..5148187:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_340571 2.7 9 9 0 0 no gra-miR8776a_MIMAT0034219_Gossypium_raimondii_miR8776a blat blast auucaaagaaagaaccccuuccaa ggaagggguucuuucuuugaauuc auucaaagaaagaaccccuuccaaaauuuggaagggguucuuucuuugaauuc NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:10043853..10043906:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_441892 2.7 13 13 0 0 no mdv2-miR-M14-3p_MIMAT0004452_Mareks_disease_miR-M14-3p blat blast ccaggaaggaguugaagcugca ucgcuucuucacucauuuucugaua ccaggaaggaguugaagcugcaguccagucgcuucuucacucauuuucugaua NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:709138..709191:+
NW_025323170.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000615_whole_genome_shotgun_sequence_750998 2.7 33 33 0 0 no osa-miR5082_MIMAT0020582_Oryza_sativa_miR5082 blat blast ugcgaugaucauagcucacu auuguuguuguuauaugcagu ugcgaugaucauagcucacuccauuauauuguuguuguuauaugcagu NW_025323170.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000615_whole_genome_shotgun_sequence:57014..57062:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_311993 2.7 89 83 6 0 no aga-miR-10360-3p_MIMAT0041522_Anopheles_gambiae_miR-10360-3p blat blast cggacuugccggauaugagcu uacuuauucggcuauaagccgag cggacuugccggauaugagcugauaaaaaccaacucggccuacggccucguugguuauauacuguacuuauucggcuauaagccgag NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:16245587..16245674:-
NW_025323114.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000551_whole_genome_shotgun_sequence_734111 2.6 6770 6770 0 0 no isc-miR-5312_MIMAT0021383_Ixodes_scapularis_miR-5312 blat blast uggcugaaaguguuugggu cgcaaccgccugccaau uggcugaaaguguuuggguggauuugaaagguaacgguugauuucucagucaaucguauauuuagauuuuccgcaaccgccugccaau NW_025323114.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000551_whole_genome_shotgun_sequence:187665..187753:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_51694 2.6 18 18 0 0 no dvi-miR-9714-3p_MIMAT0039296_Drosophila_virilis_miR-9714-3p blat blast cauuguugggcuucauuagc uggccauuugguggg uggccauuuggugggggaccauuguugggcuucauuagc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:23380904..23380943:-
NW_025323194.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000643_whole_genome_shotgun_sequence_755560 2.6 38 38 0 0 no hsa-miR-548p_MIMAT0005934_Homo_sapiens_miR-548p blat blast uagcaaaaugucccaaucucgagc uucgcgauuguugucguugaguugag uucgcgauuguugucguugaguugagcgacaaaacuuagcaaaaugucccaaucucgagc NW_025323194.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000643_whole_genome_shotgun_sequence:26062..26122:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_318197 2.6 2 1 0 1 no mmu-miR-151-5p_MIMAT0004536_Mus_musculus_miR-151-5p blat blast gcgaggaguaccgagauc acgaugguacucgagagua acgaugguacucgagaguaagcauaaaggugagucuuucagcaccgcgucugcuuugcgaggaguaccgagauc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23433653..23433727:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_255810 2.6 612 612 0 0 no stu-miR8050-5p_MIMAT0031238_Solanum_tuberosum_miR8050-5p blat blast gaguaggauaugaagaauucugc acgaauucuauucuacgaaa gaguaggauaugaagaauucugcaaggcgacgaggguguuauccacugaggucgaauucuacgaauucuauucuacgaaa NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:8511861..8511941:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_430852 2.6 10 10 0 0 no stu-miR7999-5p_MIMAT0031189_Solanum_tuberosum_miR7999-5p blat blast uugggucauaaauugaagugga cucuucaauuuguggcccuugu cucuucaauuuguggcccuugugcuuugcacuugggucauaaauugaagugga NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:3466257..3466310:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_264026 2.6 2 1 0 1 no smo-miR1106_MIMAT0005263_Selaginella_moellendorffii_miR1106 blat blast guuaaaggaccaggucuccauc ugguugaccuuccaggaauuauu guuaaaggaccaggucuccaucguaugguauugguugaccuuccaggaauuauu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:1161750..1161804:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_399272 2.6 394 394 0 0 no ame-miR-3747b-5p_MIMAT0018516_Apis_mellifera_miR-3747b-5p blat blast ugcgagaugagcuuccuguugugga cagauggaguagcaugugcugcagu cagauggaguagcaugugcugcagugaggauacugcgagaugagcuuccuguugugga NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:5865832..5865890:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_200950 2.6 23 23 0 0 no mmu-miR-7020-3p_MIMAT0027945_Mus_musculus_miR-7020-3p blat blast caccccuccccgcacaac aaugaaguggagagguguu caccccuccccgcacaacuuuuuuuuucugcaauugaggaaagaauuauaaaugaaguggagagguguu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:1729734..1729803:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_401672 2.6 13 13 0 0 no cin-miR-4121-3p_MIMAT0016713_Ciona_intestinalis_miR-4121-3p blat blast cuguuggaaguugugccuug uagcacacuaaucugaugcuc uagcacacuaaucugaugcucaaccaacugagccaaccuguuggaaguugugccuug NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:8454085..8454142:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_326596 2.6 9 9 0 0 no gra-miR8776a_MIMAT0034219_Gossypium_raimondii_miR8776a blat blast auucaaagaaagaaccccuucca gaagggguucuuucuuugaauuc auucaaagaaagaaccccuuccaaauuuuggaagggguucuuucuuugaauuc NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:10043855..10043908:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_156702 2.6 3365 2595 0 770 no aca-miR-5463_MIMAT0022095_Anolis_carolinensis_miR-5463 blat blast ucugccaaucgucagacaaacuac guuuccuggcggucgacagagu ucugccaaucgucagacaaacuacuuugaugguuuccuggcggucgacagagu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:3282275..3282328:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_241990 2.6 429 429 0 0 no ppt-miR1041_MIMAT0005151_Physcomitrella_patens_miR1041 blat blast uuuucgggauagcaugcacuuuaga uacagaugcugcuucuuuggagacu uacagaugcugcuucuuuggagacuaauuuuucgggauagcaugcacuuuaga NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:21425085..21425138:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_200968 2.6 10 10 0 0 no mmu-miR-7020-3p_MIMAT0027945_Mus_musculus_miR-7020-3p blat blast caccccuccccgcacaau ugaguggagagguguugu caccccuccccgcacaauuucuuuuuuuuucugaaaacaaaugaguggagagguguugu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:1750387..1750446:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_298540 2.5 927 927 0 0 no seu-miR11046_MIMAT0043660_Salicornia_europaea_miR11046 blat blast cuguguuuuugggucggu cgaccaguacucagua cgaccaguacucaguauucuguguuuuugggucggu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:22932413..22932449:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_177376 2.5 32 32 0 0 no ptc-miR172b-5p_MIMAT0022904_Populus_trichocarpa_miR172b-5p blat blast ugagcaucggguugucacgcggg cgcguaccgauggcucagu cgcguaccgauggcucaguucguugagcaucggguugucacgcggg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:1691693..1691739:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_335942 2.5 9 5 4 0 no ppc-miR-8344-5p_MIMAT0033234_Pristionchus_pacificus_miR-8344-5p blat blast ucugcggaucauggccuucg acggucgucuuccaccauuc ucugcggaucauggccuucguccgcccuacccgacucuagggauggguaggaaaccgaugcggacgacggucgucuuccaccauuc NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:2957234..2957320:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_373045 2.5 452 438 1 13 no ebv-miR-BART15_MIMAT0003713_Epstein_Barr_miR-BART15 blat blast gucaguggcuucauagcuc uguugaaguccugacuuuu gucaguggcuucauagcucaauugguuagaacgucgcgccgguaucgcgaggucacgggcucaaaccccuuacuguugaaguccugacuuuu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:13509500..13509592:-
NW_025322644.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000127_whole_genome_shotgun_sequence_618481 2.5 81 81 0 0 no gma-miR5679_MIMAT0022467_Glycine_max_miR5679 blat blast uuggugacaaauuucucuuuga agggagaaauuucuuacucuug agggagaaauuucuuacucuugauauaucauuggugacaaauuucucuuuga NW_025322644.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000127_whole_genome_shotgun_sequence:475944..475996:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_335946 2.5 9 5 4 0 no ppc-miR-8344-5p_MIMAT0033234_Pristionchus_pacificus_miR-8344-5p blat blast ucugcggaucauggccuucg acggucgucuuccaccauuc ucugcggaucauggccuucguccgcccuacccgacucuagggauggguaggaaaccgaugcggacgacggucgucuuccaccauuc NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:2982545..2982631:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_224558 2.5 12 5 7 0 no hsa-miR-1262_MIMAT0005914_Homo_sapiens_miR-1262 blat blast cugggugaguuucuugacuggc uuuucaacggggagagucacgcaccg cugggugaguuucuugacuggcauacgacaagucagaaucaacuggacacugaugcaguugccaugcuuuucaacggggagagucacgcaccg NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:30348320..30348413:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_488829 2.5 9 9 0 0 no gga-miR-6698-3p_MIMAT0025805_Gallus_gallus_miR-6698-3p blat blast guaggagagagcccuggga cuaggguucuauccuaauc cuaggguucuauccuaaucguucccugcauugagagagagggaugaguaggagagagcccuggga NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:12592103..12592168:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_214641 2.5 2 1 0 1 no rgl-miR7797b_MIMAT0032260_Rehmannia_glutinosa_miR7797b blat blast cuugauuucguaaguaggaggu uuuccuauacugacgauua uuuccuauacugacgauuaagcuccaagagcuugauuucguaaguaggaggu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:18038451..18038503:+
NW_025322672.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000178_whole_genome_shotgun_sequence_645519 2.5 70 70 0 0 no tcf-miR-10299_MIMAT0041430_Triops_cancriformis_miR-10299 blat blast uucggcacaugaguggagcg uuaccauucauucauggcgcuaa uucggcacaugaguggagcggcgucugaaccgggccuuaauucacguuucagagaaggcguuaccauucauucauggcgcuaa NW_025322672.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000178_whole_genome_shotgun_sequence:305350..305433:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_198581 2.5 2 1 0 1 no rno-miR-133c_MIMAT0017872_Rattus_norvegicus_miR-133c blat blast gagcugguuguaaugugggcu aucaaauuggauuggugcagcaac gagcugguuguaaugugggcuguugauaagccuguugauggauauaucccaggccuauuaaucauaaaucaaauuggauuggugcagcaac NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:27204526..27204617:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_475510 2.5 14 14 0 0 no efu-miR-9236b_MIMAT0034849_Eptesicus_fuscus_miR-9236b blat blast acucuagucugacacuguu gagugcgaaagugu acucuagucugacacuguuucaaaccccucaaagagugcgaaagugu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17677833..17677880:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_236389 2.5 9 7 0 2 no mse-miR-6098_MIMAT0024506_Manduca_sexta_miR-6098 blat blast auagugauuuauccgguggau auccaccggauaaaucguu auccaccggauaaaucguuauccacuggauaaguaauagcgaaaccaauugcaauagccaauggauagugauuuauccgguggau NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:15062071..15062156:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_152191 2.5 9 7 0 2 no gga-miR-6580-5p_MIMAT0025667_Gallus_gallus_miR-6580-5p blat blast ugaauugaccaccguaaagaga ucuuuacaguggucaauucaca ugaauugaccaccguaaagagauucgaaucucuuuacaguggucaauucaca NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:17427463..17427515:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_30293 2.5 9 9 0 0 no bta-miR-2474_MIMAT0012065_Bos_taurus_miR-2474 blat blast aaccgggcugggauuuucagcu cugaaaauccuacccgguuuu cugaaaauccuacccgguuuuagaaaccgggcugggauuuucagcu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:34875492..34875538:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_475630 2.5 4 3 0 1 no cel-miR-788-3p_MIMAT0015240_Caenorhabditis_elegans_miR-788-3p blat blast ugaaaugggccaugcuguuc cagggccucuugagcuggua cagggccucuugagcugguaaaacaaaauauuuuggaagcugguacugaaaugggccaugcuguuc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17723130..17723196:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_402334 2.5 61 61 0 0 no bmo-miR-3336_MIMAT0015523_Bombyx_mori_miR-3336 blat blast ccuguggucauggaacucugggc ugagaauagaugauuuccacaugca ugagaauagaugauuuccacaugcaguacuugcaguugcuccuguggucauggaacucugggc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:9618917..9618980:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_186780 2.4 9 7 0 2 no ssa-miR-196a-3-3p_MIMAT0032456_Salmo_salar_miR-196a-3-3p blat blast ucgcaacaaguugggcccaacaaug uuggccaagaauguugcgagcg ucgcaacaaguugggcccaacaauguugcguuuuguuggccaagaauguugcgagcg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:14199647..14199704:-
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_607053 2.4 289 289 0 0 no osa-miR396f-3p_MIMAT0015292_Oryza_sativa_miR396f-3p blat blast guaguucagagccugagaaug uuuucaagcucucaguacugucca uuuucaagcucucaguacuguccaaacacaguuuguaaagucuauguugguaguucagagccugagaaug NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:787953..788023:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_370010 2.4 9 7 0 2 no blat blast uacgggguuauaugcacgagu ugugucaaaagcccgaacgagc uacgggguuauaugcacgaguuguuugugucaaaagcccgaacgagc NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:11829967..11830014:-
NW_025323124.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000566_whole_genome_shotgun_sequence_739318 2.4 41 38 0 3 no ptc-miR7840_MIMAT0030397_Populus_trichocarpa_miR7840 blat blast caaggaguaaucgggcgagug uacgagcaugcuuaccccug caaggaguaaucgggcgagugauuugaaauuacgagcaugcuuaccccug NW_025323124.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000566_whole_genome_shotgun_sequence:55749..55799:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_227759 2.4 11 11 0 0 no crm-miR-64b-3p_MIMAT0011638_Caenorhabditis_remanei_miR-64b-3p blat blast aauguaugugcuagucagu ugacaugcguauacagugu aauguaugugcuagucaguaguguguuuaauguacaacugacaugcguauacagugu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:3788360..3788417:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_515090 2.4 2 1 0 1 no bmo-miR-3414-3p_MIMAT0015621_Bombyx_mori_miR-3414-3p blat blast agauuuuuucgagauugaagu cuucgacgaggacaaggaaaucggcga agauuuuuucgagauugaaguauuuaagucgcagcuagugaccguugcgucgugugacuucgacgaggacaaggaaaucggcga NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:2707707..2707791:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_409140 2.4 21 21 0 0 no cja-miR-9952a_MIMAT0039727_Callithrix_jacchus_miR-9952a blat blast cuuuaugagcucuucgggacgacua uuugucgcaaaguucaaaagag uuugucgcaaaguucaaaagaggugaucguaucaguuaucaagcauucuuagauucucuuuaugagcucuucgggacgacua NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:19958374..19958456:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_253146 2.4 4 3 0 1 no prd-miR-7930-3p_MIMAT0030709_Panagrellus_redivivus_miR-7930-3p blat blast caaggaugggcucugaugu ucgccuuucuugugaaaacu caaggaugggcucugauguuggcuaaugacucgccuuucuugugaaaacu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:5143576..5143626:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_409677 2.4 710 620 87 3 no cin-miR-4119-3p_MIMAT0016711_Ciona_intestinalis_miR-4119-3p blat blast gcgaauggcacgguggcuc uucguuccgagcgucgccg uucguuccgagcgucgccggguucauugaagcgagacguaaauaaugacguucaaaguucgagcccauugaccgcgaauggcacgguggcuc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:20574326..20574418:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_365981 2.4 11 9 0 2 no hbr-miR6172_MIMAT0024792_Hevea_brasiliensis_miR6172 blat blast uggaccgucugagaaucagg ucagacggguaagggaga ucagacggguaagggagagagugcgugaccgcgagcgacuuggaccgucugagaaucagg NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:4938275..4938335:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_271537 2.4 5 4 0 1 no hsa-miR-4704-3p_MIMAT0019804_Homo_sapiens_miR-4704-3p blat blast ucagucacuaucaacaauccuucuc agaggugauugauguggu agaggugauugaugugguugaagaaaugucagucacuaucaacaauccuucuc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:11203245..11203298:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_285115 2.4 1164 1161 2 1 no cin-miR-4119-3p_MIMAT0016711_Ciona_intestinalis_miR-4119-3p blat blast gcgaauggcacgguggcucaauc ugaccgucaguucgacucca gcgaauggcacgguggcucaaucgagugguagugaacaucuauggcggacgaugagccugaccgucaguucgacucca NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:9161540..9161618:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_497902 2.4 14 14 0 0 no cel-miR-255-5p_MIMAT0020341_Caenorhabditis_elegans_miR-255-5p blat blast auaagaaauuguauggagcucu aguuuuacucaacuucuuguac aguuuuacucaacuucuuguacuuuuaguauaagaaauuguauggagcucu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:1334721..1334772:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_454261 2.4 14 14 0 0 no cel-miR-255-5p_MIMAT0020341_Caenorhabditis_elegans_miR-255-5p blat blast auaagaaauuguauggagcucu aguuuuacucaacuucuuguac aguuuuacucaacuucuuguacuuuuaguauaagaaauuguauggagcucu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:15303065..15303116:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_475236 2.3 86 86 0 0 no cel-miR-58a-3p_MIMAT0000030_Caenorhabditis_elegans_miR-58a-3p blat blast ugagaucgacugaaacucagccc gcuggcagucgauuuuuga gcuggcagucgauuuuugaugacguagaaacuagagcacccugggaaaacuuuucagucaguuugagaucgacugaaacucagccc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17422968..17423054:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_455813 2.3 86 86 0 0 no cel-miR-58a-3p_MIMAT0000030_Caenorhabditis_elegans_miR-58a-3p blat blast ugagaucgacugaaacucagccc gcuggcagucgauuuuuga gcuggcagucgauuuuugaugacguagaaacuagagcacccugggaaaacuuuucagucaguuugagaucgacugaaacucagccc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17451768..17451854:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_217324 2.3 375 375 0 0 no bta-miR-2355-3p_MIMAT0011892_Bos_taurus_miR-2355-3p blat blast guuguccuauguagaucgggu uggguaguacggaggauucuga guuguccuauguagaucggguguccaagccaaguuuggcgucaauauggguaguacggaggauucuga NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:21532626..21532694:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_530274 2.3 71 71 0 0 no bmo-miR-3283_MIMAT0015469_Bombyx_mori_miR-3283 blat blast uuccuuaacucgcacaca ugugugaagaaguacuu ugugugaagaaguacuucaauuccuuaacucgcacaca NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:858622..858660:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_138559 2.3 9680 9663 1 16 no hsa-miR-8077_MIMAT0031004_Homo_sapiens_miR-8077 blat blast agcugaguuucaaguaccugaca gauuaggaacucagcauag agcugaguuucaaguaccugacaaaaguuuagauuuuaguuggauuaggaacucagcauag NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:480083..480144:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260113 2.3 16 16 0 0 no hsa-miR-890_MIMAT0004912_Homo_sapiens_miR-890 blat blast cacuuggauuggagcuaaac guagcuugaguuccacuagcugg guagcuugaguuccacuagcugguucacuuggauuggagcuaaac NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15046035..15046080:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_529630 2.3 2 1 0 1 no mle-miR-12096a-3p_MIMAT0048830_Melibe_leonina_miR-12096a-3p blat blast gagggcaagggucuaauu ugggccauugauccguggu ugggccauugauccgugguucuugagggcaagggucuaauu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:177198..177239:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_107326 2.3 4951 4951 0 0 no hsa-miR-1184_MIMAT0005829_Homo_sapiens_miR-1184 blat blast acugcagcuaaauacuccgc ggggucuuaagccgcaauau ggggucuuaagccgcaauauuuaugauacugcagcuaaauacuccgc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:16120647..16120694:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_487327 2.3 16 16 0 0 no mmu-miR-667-5p_MIMAT0017239_Mus_musculus_miR-667-5p blat blast aggugcugcauggcuguc caguugugacuucagggcggcu caguugugacuucagggcggcuagugaggugcugcauggcuguc NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:10774236..10774280:+
NW_025322639.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000118_whole_genome_shotgun_sequence_611509 2.3 207 207 0 0 no gga-miR-1464_MIMAT0007342_Gallus_gallus_miR-1464 blat blast ugcuguuucggccuucuggg cucaguggggugagugcaau ugcuguuucggccuucugggccucaucaguuuuuuguguuuaaggcgaaugacgggcccucaguggggugagugcaau NW_025322639.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000118_whole_genome_shotgun_sequence:875595..875673:-
NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence_733591 2.3 2 1 0 1 no eca-miR-9170_MIMAT0034748_Equus_caballus_miR-9170 blat blast guugcaucaggagagaauguu cuuuucuuaaaccugaugagcagggu guugcaucaggagagaauguuguugauguuccuuuucuuaaaccugaugagcagggu NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence:229977..230034:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_441653 2.2 126 126 0 0 no hpo-miR-10110-5p_MIMAT0040799_Heligmosomoides_polygyrus_miR-10110-5p blat blast uauuucucggugcuaguuugau caagcuugcgcuaagaauauu caagcuugcgcuaagaauauuuuauugaauauuucucggugcuaguuugau NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:423395..423446:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_193944 2.2 38 38 0 0 no hsa-miR-548p_MIMAT0005934_Homo_sapiens_miR-548p blat blast uagcaaaaugucccaaucucgagc uucgcgaugguugucguugaguugag uucgcgaugguugucguugaguugagcgacaaaacuuagcaaaaugucccaaucucgagc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:21568146..21568206:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_122348 2.2 12 12 0 0 no bmo-miR-3388-3p_MIMAT0015588_Bombyx_mori_miR-3388-3p blat blast gcgcauugcacucuugug cuggagcaagcaugcgcgc gcgcauugcacucuugugaauaauauccuggagcaagcaugcgcgc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:35583803..35583849:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_208854 2.2 16 16 0 0 no osa-miR1861a_MIMAT0007796_Oryza_sativa_miR1861a blat blast ugaucuugaaccauguuuuguag gugaaacaagguuucagauugac ugaucuugaaccauguuuuguaggugaaagugaaacaagguuucagauugac NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:11824240..11824292:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_453678 2.2 14 4 0 10 no mmu-miR-871-3p_MIMAT0017265_Mus_musculus_miR-871-3p blat blast ugacuggcucccguaacuuggaaua uguuuugcgaacggagagaaaaauggc ugacuggcucccguaacuuggaauauccauggauauucacuguuuugcgaacggagagaaaaauggc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:14719912..14719979:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_195803 2.2 12238 12238 0 0 no isc-miR-5312_MIMAT0021383_Ixodes_scapularis_miR-5312 blat blast uggcugaaaguguuugggu cuuuagauuguccacaau uggcugaaaguguuuggguagauugcaaaguuaacaguugauuucucagccaaucguaccuuuagauuguccacaau NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24054310..24054387:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_487415 2.2 8 8 0 0 no cca-miR6114-5p_MIMAT0024553_Cynara_cardunculus_miR6114-5p blat blast agaaaggacccugggaacgaggu cucguucccagcguccuuucucu cucguucccagcguccuuucucuacucgaaguugagaaaggacccugggaacgaggu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:10957568..10957625:+
NW_025323295.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000757_whole_genome_shotgun_sequence_761567 2.2 26 26 0 0 no ppt-miR408b_MIMAT0005050_Physcomitrella_patens_miR408b blat blast agcacugcacuggugaggcc cuucucagguuaguguuag agcacugcacuggugaggcccaggaugcuugccugacgcuucucagguuaguguuag NW_025323295.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000757_whole_genome_shotgun_sequence:10352..10409:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260265 2.2 38 38 0 0 no hsa-miR-548p_MIMAT0005934_Homo_sapiens_miR-548p blat blast uagcaaaaugucccaaucucgagc uucgcgaugguugucguugaguugag uucgcgaugguugucguugaguugagcgacaaaacuuagcaaaaugucccaaucucgagc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15278146..15278206:+
NW_025322662.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000160_whole_genome_shotgun_sequence_637530 2.2 9 8 0 1 no ppc-miR-8316-3p_MIMAT0033170_Pristionchus_pacificus_miR-8316-3p blat blast cuggugucuaaccagggacgaggc uacuugggcagacaggugcacu cuggugucuaaccagggacgaggccucugagagcauugauacuugggcagacaggugcacu NW_025322662.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000160_whole_genome_shotgun_sequence:286498..286559:-
NW_025322815.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000156_whole_genome_shotgun_sequence_702139 2.2 126 126 0 0 no bta-miR-2428_MIMAT0011998_Bos_taurus_miR-2428 blat blast uggcuggaaguguuugggg ccacaaucgccugccagu uggcuggaaguguuuggggugauuucagagguaacgguugauuucucagucaaucguacauuuagauucuccacaaucgccugccagu NW_025322815.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000156_whole_genome_shotgun_sequence:90143..90231:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_310515 2.2 15 15 0 0 no cfa-miR-450a_MIMAT0001548_Canis_familiaris_miR-450a blat blast cuuuugcgcaugacugcu cugugcgaagccc cuuuugcgcaugacugcuaucaagagaagagcugugcgaagccc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:14352407..14352451:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_298539 2.2 927 927 0 0 no seu-miR11046_MIMAT0043660_Salicornia_europaea_miR11046 blat blast cuguguuuuugggucggu cgaccaguacucagua cgaccaguacucaguauucuguguuuuugggucggu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:22932413..22932449:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_171191 2.2 38 38 0 0 no hsa-miR-548p_MIMAT0005934_Homo_sapiens_miR-548p blat blast uagcaaaaugucccaaucucgagc uucgcgaugguugucguugaguugag uucgcgaugguugucguugaguugagcgacaaaacuuagcaaaaugucccaaucucgagc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:22846879..22846939:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_392952 2.2 18 18 0 0 no mmu-miR-125a-3p_MIMAT0004528_Mus_musculus_miR-125a-3p blat blast ccaggugaucuggugacgua uguauaaugggacuggca uguauaaugggacuggcaaaauagccaggugaucuggugacgua NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:19475323..19475367:+
NW_025323163.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000607_whole_genome_shotgun_sequence_749782 2.2 12 12 0 0 no ppt-miR1034_MIMAT0005141_Physcomitrella_patens_miR1034 blat blast uuacuuugacugugugagg agauacagugaacugaug agauacagugaacugaugcaguugccuuacuuugacugugugagg NW_025323163.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000607_whole_genome_shotgun_sequence:66486..66531:-
NW_025322832.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000179_whole_genome_shotgun_sequence_706276 2.2 155 96 59 0 no mmu-miR-410-3p_MIMAT0001091_Mus_musculus_miR-410-3p blat blast uauauaacuaacugcagacag gugcuguugucugggaugaagg uauauaacuaacugcagacaguacuauuucggccuucugggccucaucagugcagugcuguugucugggaugaagg NW_025322832.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000179_whole_genome_shotgun_sequence:144096..144172:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_180605 2.2 13 13 0 0 no gma-miR5769_MIMAT0023166_Glycine_max_miR5769 blat blast ugagggaacucggaaauggc cuuaucgcgcgcggauuucgau ugagggaacucggaaauggccuauucauauaucauggugccuuaucgcgcgcggauuucgau NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:6483887..6483949:-
NW_025322623.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000066_whole_genome_shotgun_sequence_581653 2.2 49 49 0 0 no mdo-miR-7270-3p_MIMAT0028511_Monodelphis_domestica_miR-7270-3p blat blast cccaggucauaaauugaagu uucaauuuauggcccaagca uucaauuuauggcccaagcacaucacacccaggucauaaauugaagu NW_025322623.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000066_whole_genome_shotgun_sequence:358128..358175:+
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_553352 2.1 544 543 0 1 no osa-miR171i-5p_MIMAT0022886_Oryza_sativa_miR171i-5p blat blast ugguauuggcaaggcuuugaaaa gguucaaacuguguggu ugguauuggcaaggcuuugaaaaggguagccugugguucaaacuguguggu NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:1876335..1876386:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_434469 2.1 37 37 0 0 no cin-miR-281-5p_MIMAT0015265_Ciona_intestinalis_miR-281-5p blat blast aggagagugaacuggaucacu uguuguuccaguuuugaggccguua aggagagugaacuggaucacuuucacgcaaaugaaaguuguuuugguguuguguuguuccaguuuugaggccguua NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:9004673..9004749:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_196199 2.1 744 744 0 0 no ath-miR161.1_MIMAT0000181_Arabidopsis_thaliana_miR161.1 blat blast ugaaaguguuuggguagauu ucucagccaauuguacauuuaga ugaaaguguuuggguagauuucaaagguaacgguugauuucucagccaauuguacauuuaga NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24579080..24579142:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_303693 2.1 9 7 0 2 no hsa-miR-606_MIMAT0003274_Homo_sapiens_miR-606 blat blast aaacuacuuauaucuuggucuuga aucaagguguaagugguuuug aaacuacuuauaucuuggucuugaaugugcaagaucaagguguaagugguuuug NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:6180481..6180535:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_441803 2.1 4 2 0 2 no api-miR-3050_MIMAT0014791_Acyrthosiphon_pisum_miR-3050 blat blast ugagaucuucagagaaacuu aauucuuuguacgacucuacgcg aauucuuuguacgacucuacgcgcguuuuucuuuuucguagcuguguugagaucuucagagaaacuu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:584078..584145:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_229057 2.1 59 59 0 0 no pta-miR159a_MIMAT0004990_Pinus_taeda_miR159a blat blast auggauugugggacggugu acuccuaucagcuguug auggauugugggacggugugggauccgugagcagugcauacuccuaucagcuguug NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:5862558..5862614:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_149117 2.1 36 34 0 2 no sma-miR-8421-3p_MIMAT0033547_Schistosoma_mansoni_miR-8421-3p blat blast ugaucuaagaagcaauccuccgccu cuugaggauauugcagauuuuaaccugcg ugaucuaagaagcaauccuccgccuauggaacuugaggauauugcagauuuuaaccugcg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:13111476..13111536:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_404550 2.1 35 35 0 0 no cre-miR908.1_MIMAT0004965_Chlamydomonas_reinhardtii_miR908.1 blat blast agagaagaauggacugggaa accagaagccucaaucaucucggc accagaagccucaaucaucucggcgucccagagaagaauggacugggaa NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:12669645..12669694:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_435579 2.1 36 34 0 2 no sma-miR-8421-3p_MIMAT0033547_Schistosoma_mansoni_miR-8421-3p blat blast ugaucuaagaagcaauccuccgccu cuugaggauauugcagauuuuaaccugcg ugaucuaagaagcaauccuccgccuauggaacuugaggauauugcagauuuuaaccugcg NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:10472436..10472496:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_392135 2.1 11 11 0 0 no sme-miR-746-5p_MIMAT0012103_Schmidtea_mediterranea_miR-746-5p blat blast uccggauaaucgagguucgacu ucauauucucgauuaucuggacu ucauauucucgauuaucuggacuauuucuuguguucucaacaaguccggauaaucgagguucgacu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:18283341..18283407:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_99160 2.1 124 124 0 0 no sly-miR9471b-3p_MIMAT0035442_Solanum_lycopersicum_miR9471b-3p blat blast uuggcugaaauuguuuga auuaagacgcugauagccucagc auuaagacgcugauagccucagcaaauugcuuggcugaaauuguuuga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5044698..5044746:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_408226 2.1 11 11 0 0 no sme-miR-746-5p_MIMAT0012103_Schmidtea_mediterranea_miR-746-5p blat blast uccggauaaucgagguucgacu ucauauucucgauuaucuggacu ucauauucucgauuaucuggacuauuucuuguguucucaacaaguccggauaaucgagguucgacu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:18278533..18278599:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_318290 2.1 14 14 0 0 no mmu-miR-122-5p_MIMAT0000246_Mus_musculus_miR-122-5p blat blast uggagugugcccgacuguuugagc ucugcggacgcuacuccgaagug ucugcggacgcuacuccgaaguguugaccauuccucauggagugugcccgacuguuugagc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23538304..23538365:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_236580 2.0 28 28 0 0 no ath-miR161.1_MIMAT0000181_Arabidopsis_thaliana_miR161.1 blat blast ugaaaguguuugggaagaa cuuucgaacauucgcgcg cuuucgaacauucgcgcgcuugagcccgcgcuuagcacugcgggucaacaacuuugaaaguguuugggaagaa NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:15392953..15393026:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_185942 2.0 37 37 0 0 no cin-miR-281-5p_MIMAT0015265_Ciona_intestinalis_miR-281-5p blat blast aggagagugaacuggaucacu cgauccagaacgcauguca cgauccagaacgcaugucaauuggugaggagagugaacuggaucacu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:13192951..13192998:-
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_607219 2.0 744 744 0 0 no ath-miR161.1_MIMAT0000181_Arabidopsis_thaliana_miR161.1 blat blast ugaaaguguuuggguagauu ucucagccaauuguacauuuaga ugaaaguguuuggguagauuucaaagguaacuguugauuucucagccaauuguacauuuaga NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:178031..178093:-
NW_025323226.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000677_whole_genome_shotgun_sequence_758445 2.0 108 108 0 0 no hsa-miR-4477b_MIMAT0019005_Homo_sapiens_miR-4477b blat blast cuuaaggacggugccuacuauugu agugaaugcaggcaugagugguu agugaaugcaggcaugagugguuccaucucuagugugugggacuuaaggacggugccuacuauugu NW_025323226.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000677_whole_genome_shotgun_sequence:36959..37025:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_452352 2.0 2 1 0 1 no cel-miR-44-5p_MIMAT0020771_Caenorhabditis_elegans_miR-44-5p blat blast cuggauguuuuccucuugccauggc aaagcaggagagacgaacagagc aaagcaggagagacgaacagagcagucauugcuggauguuuuccucuugccauggc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:12911323..12911379:+
NW_025322650.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000139_whole_genome_shotgun_sequence_625610 2.0 547 547 0 0 no hsa-miR-5088-5p_MIMAT0021080_Homo_sapiens_miR-5088-5p blat blast cagggcucggacaggauagcauuug aguuugaauucgucuuagcaucaag aguuugaauucgucuuagcaucaagucggugaacuaaguaccccaauccagggcucggacaggauagcauuug NW_025322650.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000139_whole_genome_shotgun_sequence:448479..448552:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_16320 2.0 16 16 0 0 no bmo-bantam-5p_MIMAT0015278_Bombyx_mori_bantam-5p blat blast cugguuuuccuucaagccg gcgaggaggaaaacagcug cugguuuuccuucaagccgaauaaaucuuuuguauuuugcuaaagauuugcgaggaggaaaacagcug NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:19505822..19505890:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_53604 2.0 66 66 0 0 no bmo-miR-2818_MIMAT0013728_Bombyx_mori_miR-2818 blat blast aaagggaauucucggugg gccgggucuccauaaau gccgggucuccauaaaugcaaagggaauucucggugg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:25126572..25126609:-
NW_025322649.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000138_whole_genome_shotgun_sequence_624293 2.0 11 11 0 0 no bmo-miR-3266_MIMAT0015450_Bombyx_mori_miR-3266 blat blast gugcugaaucucuucaac agacgagaaaagcauug agacgagaaaagcauugucaucgauuugguggugcugaaucucuucaac NW_025322649.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000138_whole_genome_shotgun_sequence:705950..705999:+
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_606993 2.0 344 344 0 0 no osa-miR396f-3p_MIMAT0015292_Oryza_sativa_miR396f-3p blat blast guaguucagagccugagaaug uuuucaagcucuaguacugucca uuuucaagcucuaguacuguccaaacacaguuuguaaaguucauguugguaguucagagccugagaaug NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:655075..655144:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_409102 2.0 173 173 0 0 no bta-miR-2310_MIMAT0011822_Bos_taurus_miR-2310 blat blast uuuuuguucuaguaugugcuacg uggcuuauacuaaaacaaauaua uggcuuauacuaaaacaaauauauuaaaccauuauuuuuguucuaguaugugcuacg NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:19893745..19893802:-
NW_025323152.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000595_whole_genome_shotgun_sequence_748170 2.0 124 124 0 0 no hsa-miR-4788_MIMAT0019958_Homo_sapiens_miR-4788 blat blast cuacggacuacaauagggaccuuc ugguauacauacccuucccugguccaggg ugguauacauacccuucccugguccagggagcacccacugaccccacuccauggacuacccuacggacuacaauagggaccuuc NW_025323152.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000595_whole_genome_shotgun_sequence:104908..104992:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_422514 1.9 1203 486 717 0 no mmu-miR-6938-3p_MIMAT0027777_Mus_musculus_miR-6938-3p blat blast ucaucugggugauuggagucc aagccaucuucagagucaa ucaucugggugauuggaguccucagaagguccuguuguuagugacugacguuucgacaaccuguaaggaagccaucuucagagucaa NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:11245323..11245410:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_137049 1.9 15 15 0 0 no osa-miR5337a_MIMAT0021410_Oryza_sativa_miR5337a blat blast aaauuacuggacugcucu ugcguucaguuauugcu ugcguucaguuauugcuccaaauuacuggacugcucu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:18164805..18164842:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_350917 1.9 30 30 0 0 no hsa-miR-412-3p_MIMAT0002170_Homo_sapiens_miR-412-3p blat blast ccuucaccuguacgaauaaagagcu gguuuuauugauacagugcauuau gguuuuauugauacagugcauuauuucaaucguaaauauauuacauuggauuccuucaccuguacgaauaaagagcu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:7208311..7208388:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_39949 1.9 9 9 0 0 no bta-miR-10185-5p_MIMAT0040944_Bos_taurus_miR-10185-5p blat blast acggaggguuaagaaagc uuucuuuccuuuucaggg acggaggguuaagaaagcaauuucuuuccuuuucaggg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:8841180..8841218:-
NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence_733277 1.9 519 519 0 0 no cin-miR-4001a-5p_MIMAT0016444_Ciona_intestinalis_miR-4001a-5p blat blast uggaacuucagcuagcauuagag cugugauaguugaagaaga cugugauaguugaagaagaugaagcucagcuggaacuucagcuagcauuagag NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence:99404..99457:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_426580 1.9 4 1 0 3 no gga-miR-1750_MIMAT0007657_Gallus_gallus_miR-1750 blat blast agaggaccuuggccgucugggg uaacagaacgaaccagggagcu uaacagaacgaaccagggagcugagagauaugguggcugagcuaagugacuuugaagaggaccuuggccgucugggg NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:61088..61165:-
NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence_555837 1.9 8 7 0 1 no blat blast uacgggguuauaugcacgagu ugugucaaaaaccccaacgagc uacgggguuauaugcacgaguuguuugugucaaaaaccccaacgagc NW_025322617.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000030_whole_genome_shotgun_sequence:528273..528320:+
NW_025322796.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000133_whole_genome_shotgun_sequence_696214 1.9 11 11 0 0 no hsa-miR-3944-3p_MIMAT0018360_Homo_sapiens_miR-3944-3p blat blast aucgggcugucacgcgga cgcgcacugguggcucguga cgcgcacugguggcucgugaucaguugguugaacaucgggcugucacgcgga NW_025322796.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000133_whole_genome_shotgun_sequence:178083..178135:-
NW_025322627.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000080_whole_genome_shotgun_sequence_592381 1.9 30 30 0 0 no aca-miR-5410-5p_MIMAT0022027_Anolis_carolinensis_miR-5410-5p blat blast cguugucggcuauaggguu uccuuagcaucggcgacggc cguugucggcuauaggguuacguuguaagggauccuuagcaucggcgacggc NW_025322627.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000080_whole_genome_shotgun_sequence:674405..674457:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_529005 1.8 8 8 0 0 no hsa-miR-889-5p_MIMAT0026719_Homo_sapiens_miR-889-5p blat blast gauggcugugcgauuguggaac uuaccacaaucgcacagccaugau uuaccacaaucgcacagccaugauauucggugauggcugugcgauuguggaac NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:16574924..16574977:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_300125 1.8 459 458 1 0 no hsa-miR-4509_MIMAT0019046_Homo_sapiens_miR-4509 blat blast acuaaaggcaucgcuucggg cgaggucgauuccaaguga acuaaaggcaucgcuucgggguguguuucgcacuguucguccgaggucgauuccaaguga NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:1017467..1017527:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_388533 1.8 30 28 0 2 no nta-miR6154a_MIMAT0024755_Nicotiana_tabacum_miR6154a blat blast agggucucucuucucugccuccu ucguuggaacagagacccuggu agggucucucuucucugccuccuuuagucguuggaacagagacccuggu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:12268400..12268449:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_28826 1.8 8 8 0 0 no cel-miR-242_MIMAT0000298_Caenorhabditis_elegans_miR-242 blat blast uugcguagagaggccuga aggcuucccuacgcacuu uugcguagagaggccugaaaacauucagggcgucaauugcgaagaaaagccuuaauuuuucaggcuucccuacgcacuu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:32882472..32882551:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_27366 1.8 3 2 0 1 no mmu-miR-181a-5p_MIMAT0000210_Mus_musculus_miR-181a-5p blat blast aacauucacuggccguaugcgu uuccccagugagguuugccugu aacauucacuggccguaugcguugaagucguuccccagugagguuugccugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:30831582..30831634:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_454735 1.8 10 10 0 0 no nve-miR-2041a-5p_MIMAT0009804_Nematostella_vectensis_miR-2041a-5p blat blast cuuuugcuagacuuuguuu acuuagucuggucugguu acuuagucuggucugguuucaacuggaaaucugugagguuucuuaugugucuuuugcuagacuuuguuu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:15988758..15988827:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_274031 1.8 4 3 0 1 no avi-miR-temp-25_Anemonia_viridis_Urbarova_et_al._2018_NA blat blast ucaaaugucacuugguuu ucacugugggauuucugugggu ucaaaugucacuugguuugguaucgagguuuaauaucacugugggauuucugugggu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:14815256..14815313:-
NW_025322630.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000091_whole_genome_shotgun_sequence_595920 1.8 23 23 0 0 no ami-miR-93-3p_MIMAT0038105_Alligator_mississippiensis_miR-93-3p blat blast gacugccggacauggaac accuuguccggcugcca gacugccggacauggaacauuuucaaaaccuuguccggcugcca NW_025322630.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000091_whole_genome_shotgun_sequence:620597..620641:+
NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence_579743 1.8 29 29 0 0 no aga-miR-10376-5p_MIMAT0041574_Anopheles_gambiae_miR-10376-5p blat blast uaggaauccuguaugaua guaaauggggcuucuaaa uaggaauccuguaugauauuugagaacuggaacaaguaucuggcggcaaaauaguaaauggggcuucuaaa NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence:756393..756464:-
NW_025322766.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000046_whole_genome_shotgun_sequence_676286 1.7 39 39 0 0 no cin-miR-4132-5p_MIMAT0016728_Ciona_intestinalis_miR-4132-5p blat blast aaaugcaaggccauugauaggg cuggguguccugugcuucu cuggguguccugugcuucuaacuuguuuccuugagauagaauuuagaaaugcaaggccauugauaggg NW_025322766.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000046_whole_genome_shotgun_sequence:320057..320125:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_482182 1.7 3 2 0 1 no gma-miR1510a-3p_MIMAT0007368_Glycine_max_miR1510a-3p blat blast uuguuguuguuuuuuuuuu ggaaagaaacagucaaaaaguagg ggaaagaaacagucaaaaaguaggagaaaugagagguucguuuuuguuguuguuguuguuuuuuuuuu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:3584852..3584920:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_93995 1.7 2 1 0 1 no mmu-miR-706_MIMAT0003496_Mus_musculus_miR-706 blat blast cgagaaacaggccccag accggccuguuuuagcgc cgagaaacaggccccagcuauggccaccuagaaccggccuguuuuagcgc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:35731307..35731357:+
NW_025322978.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000351_whole_genome_shotgun_sequence_723610 1.7 9 9 0 0 no sbi-miR5566_MIMAT0022245_Sorghum_bicolor_miR5566 blat blast ucagcaucguccgcagguaggggg uccugcaucgguucgaguagagc ucagcaucguccgcagguagggggagacucggaagcggggcauaauccugcaucgguucgaguagagc NW_025322978.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000351_whole_genome_shotgun_sequence:2213..2281:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_143276 1.7 10 6 2 2 no bta-miR-2370-5p_MIMAT0011914_Bos_taurus_miR-2370-5p blat blast cgggaaaagggaagagaacuuau uuguuguuguuuuuuuuuu uuguuguuguuuuuuuuuuugguuguguuuuuguuuuuguuuucgggaaaagggaagagaacuuau NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:5860120..5860186:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_223252 1.7 7 7 0 0 no mdo-miR-7318-3p_MIMAT0028637_Monodelphis_domestica_miR-7318-3p blat blast uugcguauagaagccuga aggcuucuacacgcaauu uugcguauagaagccugauaaagccugaaacuuuuucaggcuucuacacgcaauu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:28522912..28522967:+
NW_025322766.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000046_whole_genome_shotgun_sequence_676250 1.7 39 39 0 0 no cin-miR-4132-5p_MIMAT0016728_Ciona_intestinalis_miR-4132-5p blat blast aaaugcaaggccauugauaggg cuggguguccugugcuucu cuggguguccugugcuucuaacuuguuuccuugagauagaauuuagaaaugcaaggccauugauaggg NW_025322766.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000046_whole_genome_shotgun_sequence:241312..241380:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_363786 1.7 38 38 0 0 no mdv2-miR-M17-3p_MIMAT0004457_Mareks_disease_miR-M17-3p blat blast gaggacaagucuguugcu aaacagaagugcccucaa gaggacaagucuguugcugaaagugaaacagaagugcccucaa NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:1661206..1661249:-
NW_025322634.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000102_whole_genome_shotgun_sequence_603106 1.7 626 314 312 0 no cin-miR-4119-3p_MIMAT0016711_Ciona_intestinalis_miR-4119-3p blat blast gcgaauggcacgguggcuc gccugaccgucaguucgacu gcgaauggcacgguggcucacucgagugguagcgaacaucuguggcggacgaugagccugaccgucaguucgacu NW_025322634.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000102_whole_genome_shotgun_sequence:1006946..1007021:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_401124 1.7 34 34 0 0 no rno-miR-487b-5p_MIMAT0017221_Rattus_norvegicus_miR-487b-5p blat blast agugguuaggauccggcg uucauuccuacauggu uucauuccuacaugguccagugguuaggauccggcg NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:8083985..8084021:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_159526 1.7 9 9 0 0 no sbi-miR5566_MIMAT0022245_Sorghum_bicolor_miR5566 blat blast ucagcaucguccgcagguaggggg uccugcaucgguucgaguagagc ucagcaucguccgcagguagggggagacucggaagcggggcauaauccugcaucgguucgaguagagc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:7663818..7663886:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_27568 1.7 22 22 0 0 no mmu-miR-6995-5p_MIMAT0027892_Mus_musculus_miR-6995-5p blat blast cugggaguaaucgggcgagug cgugcacgauuaccucugaa cugggaguaaucgggcgagugaauucaaagauguuuugaaauuacgugcacgauuaccucugaa NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:31146695..31146759:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_483621 1.7 2 1 0 1 no dps-miR-2542-3p_MIMAT0012341_Drosophila_pseudoobscura_miR-2542-3p blat blast uagaugguggucacagac uguaagaaaaucuauucuggguguu uagaugguggucacagaccuuuuuaguuguggcaacucaaagguguaagaaaaucuauucuggguguu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:5836344..5836412:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_318403 1.7 16820 16818 0 2 no gga-miR-6691-5p_MIMAT0025797_Gallus_gallus_miR-6691-5p blat blast uugcaugauuggcaggagguguucu aucucguaaugaucaugcc uugcaugauuggcaggagguguucuuguuguugaucaaguucaucucguaaugaucaugcc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23759214..23759275:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_456706 1.7 190 190 0 0 no mmu-miR-1906_MIMAT0007872_Mus_musculus_miR-1906 blat blast ugcagcaggacuguaacagaggu cuugguugaugcuguuuuaug ugcagcaggacuguaacagagguuaaaagcuuuaucuugaaauaauacuuuaaaccuugguugaugcuguuuuaug NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:18033294..18033370:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_179411 1.7 29 29 0 0 no odi-miR-1503_MIMAT0006063_Oikopleura_dioica_miR-1503 blat blast agaggaagaagaagaacaaaugcu uguguaggcuuucguugcgaguuuucuuu agaggaagaagaagaacaaaugcuucucggcagauucucuggagaauucuacguccgagaaugguguguaggcuuucguugcgaguuuucuuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:4917243..4917336:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_309256 1.7 519 519 0 0 no cin-miR-4001a-5p_MIMAT0016444_Ciona_intestinalis_miR-4001a-5p blat blast uggaacuucagcuagcauuagag cugugauaguugaagaaga cugugauaguugaagaagaugaagcucagcuggaacuucagcuagcauuagag NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:12376766..12376819:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_110856 1.7 40 40 0 0 no ath-miR163_MIMAT0000184_Arabidopsis_thaliana_miR163 blat blast augaagaguaaauaugguug augaauguuuucauucuucauac augaauguuuucauucuucauacacugcgaaugcggaugaagaguaaauaugguug NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:21439773..21439829:-
NW_025322762.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000023_whole_genome_shotgun_sequence_670568 1.6 7 5 0 2 no blat blast agacguuaaagucgucucgagaca cuuagacaacuuuaacgu agacguuaaagucgucucgagacaacuuuaacgucuuagacaacuuuaacgu NW_025322762.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000023_whole_genome_shotgun_sequence:1102513..1102565:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_396075 1.6 2 1 0 1 no dme-miR-287-3p_MIMAT0000360_Drosophila_melanogaster_miR-287-3p blat blast aguguugacuaaaugcuguggc ucaauaguaucucuguuugcuggacguu aguguugacuaaaugcuguggcuaaugugucaagaacaggagucaauaguaucucuguuugcuggacguu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:1313006..1313076:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_278976 1.6 15 12 3 0 no oan-miR-1421k-5p_MIMAT0007066_Ornithorhynchus_anatinus_miR-1421k-5p blat blast aacagguuuggauuggccucc ugguucguguccgaccuacaag aacagguuuggauuggccuccaguaugaaucaggucccaaggauuucuauuggucugaugguucguguccgaccuacaag NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:929294..929374:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_260701 1.6 4 3 0 1 no blat blast auuuuucaguccuuugucgcuuc agcgagaaaggacugaaaaauu agcgagaaaggacugaaaaauucaguccugaauuuuucaguccuuugucgcuuc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:15732481..15732535:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_541121 1.6 7 7 0 0 no mdo-miR-7316-3p_MIMAT0028633_Monodelphis_domestica_miR-7316-3p blat blast uggcaugaaauggaggcuaaug uuugccuccauuucuacuaga uggcaugaaauggaggcuaaugcaugcaaauucauuuccauuugaaagauuugcccgcauuugccuccauuucuacuaga NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:11949570..11949650:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_184403 1.6 6 4 2 0 no bdi-miR7707-5p_MIMAT0030131_Brachypodium_distachyon_miR7707-5p blat blast uuucagcccgggaugaaacu uuucagcccgggcugaaguu uuucagcccgggaugaaacucgccauguaaucgggcccuaagggccugauuacauaguggguuucagcccgggcugaaguu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:11141261..11141342:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_411611 1.6 2 1 0 1 no hma-miR-3009_MIMAT0014677_Hydra_magnipapillata_miR-3009 blat blast guucaucaagucucuggc ccuuuagacguugauacagaaca ccuuuagacguugauacagaacaagauagaguucuguucaucaagucucuggc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:774733..774786:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_511274 1.6 1270 1270 0 0 no hsa-miR-3156-3p_MIMAT0019209_Homo_sapiens_miR-3156-3p blat blast aucccacuccugacacca augccaggagaggcacac augccaggagaggcacacgaauaaaaaagagaaaaauaaagaaaagaacaaucccacuccugacacca NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:20275082..20275150:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_513134 1.6 2 1 0 1 no sma-miR-8434-3p_MIMAT0033573_Schistosoma_mansoni_miR-8434-3p blat blast auuucaugguuugcuugcc uuguaaacaaugugggacca auuucaugguuugcuugccagucaguugguuuguaaacaaugugggacca NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:627461..627511:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_296466 1.6 71 71 0 0 no sma-miR-8424-5p_MIMAT0033552_Schistosoma_mansoni_miR-8424-5p blat blast aucaacuguugacuuggcgu gacggucacaguuggaau aucaacuguugacuuggcguauugagaguagaugacggucacaguuggaau NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:20321149..20321200:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_117068 1.6 13 13 0 0 no osa-miR6245b-3p_MIMAT0044649_Oryza_sativa_miR6245b-3p blat blast guauagguagaaacugcugaauua uaucagcgggguugcugcaa uaucagcgggguugcugcaaaaguguauagguagaaacugcugaauua NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:30184903..30184951:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_111445 1.6 50 50 0 0 no hsa-miR-382-5p_MIMAT0000737_Homo_sapiens_miR-382-5p blat blast gaaguuguuggauaaaguuuga aaacuuaagagccaagaagugcca gaaguuguuggauaaaguuugaaacuggucaaacuuaagagccaagaagugcca NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:22326304..22326358:-
NW_025322669.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000174_whole_genome_shotgun_sequence_643034 1.6 371 371 0 0 no bfl-miR-4892_MIMAT0020482_Branchiostoma_floridae_miR-4892 blat blast guaggauaugaagaauucugc aggauaugaagaauucugcaa aggauaugaagaauucugcaaggcgacgaggguguuauccaccgaggccgaaguaggauaugaagaauucugc NW_025322669.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000174_whole_genome_shotgun_sequence:287482..287555:-
NW_025323115.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000552_whole_genome_shotgun_sequence_734744 1.6 12 12 0 0 no gma-miR1510a-3p_MIMAT0007368_Glycine_max_miR1510a-3p blat blast cuguuguugguagaaaucagauu ucuguccuaagaacugguggau cuguuguugguagaaaucagauuauuacggaagagcggcucuuugagaauaucuguccuaagaacugguggau NW_025323115.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000552_whole_genome_shotgun_sequence:335088..335161:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_401123 1.6 34 34 0 0 no rno-miR-487b-5p_MIMAT0017221_Rattus_norvegicus_miR-487b-5p blat blast agugguuaggauccggcg ccgugaccccgguucaauuc agugguuaggauccggcgcauucaccgccgugaccccgguucaauuc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:8083956..8084003:-
NW_025323146.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000589_whole_genome_shotgun_sequence_746940 1.6 13 12 0 1 no dme-miR-6-1-5p_MIMAT0020787_Drosophila_melanogaster_miR-6-1-5p blat blast gggaauauguaagccacagacgcgu ucaugacugcucgauugccacagaacu ucaugacugcucgauugccacagaacugggaauauguaagccacagacgcgu NW_025323146.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000589_whole_genome_shotgun_sequence:47531..47583:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_527458 1.6 23 23 0 0 no cre-miR1152_MIMAT0005397_Chlamydomonas_reinhardtii_miR1152 blat blast aaagaaggucgguuugucu gcgaauagacuaaauuuua aaagaaggucgguuugucuuucugcgaauagacuaaauuuua NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:14213620..14213662:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_437079 1.5 549 549 0 0 no hsv2-miR-H21_MIMAT0014703_Herpes_Simplex_miR-H21 blat blast guaacgucggggucacca gugauccuggucuuuguau gugauccuggucuuuguauagguaacgucggggucacca NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:11984719..11984758:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_178836 1.5 26 26 0 0 no ppc-miR-8337-3p_MIMAT0033221_Pristionchus_pacificus_miR-8337-3p blat blast cuucgaugagacuggaaagggaua ucaauuuuuaguugaaauagaagag ucaauuuuuaguugaaauagaagaguuauuugagacguaucuucgaugagacuggaaagggaua NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:3902515..3902579:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_492054 1.5 21 21 0 0 no ath-miR858a_MIMAT0004302_Arabidopsis_thaliana_miR858a blat blast cuucguugggcaaaaugacgagu cugucguuuugucggauauaaaa cuucguugggcaaaaugacgaguagaucugaauaggaaccaaacugccacugucguuuugucggauauaaaa NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:16373799..16373871:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_303888 1.5 316 316 0 0 no cre-miR1152_MIMAT0005397_Chlamydomonas_reinhardtii_miR1152 blat blast aaagaaggucgguuuguccagc ugacaagaacagucuucuucag ugacaagaacagucuucuucagaugccuaaagaaggucgguuuguccagc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:6487318..6487368:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_265820 1.5 9 9 0 0 no tgu-miR-2955-3p_MIMAT0014450_Taeniopygia_guttata_miR-2955-3p blat blast gaagcuucggagccagcagacgau ugucgauccgagagcuucuc ugucgauccgagagcuucuccagcggcugauuccaacuccucgacggcuuccgaagcuucggagccagcagacgau NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:4043873..4043949:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_29018 1.5 69 69 0 0 no pal-miR-10011-5p_MIMAT0040320_Pteropus_alecto_miR-10011-5p blat blast cgggcauuugaacuuuuga aauguucaaaugccucac cgggcauuugaacuuuugaggauuggucucguucaaauuucuucucccugggaccaaaguaauguucaaaugccucac NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:33206845..33206923:+
NW_025322676.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000184_whole_genome_shotgun_sequence_646752 1.5 164 164 0 0 no aca-miR-5412-3p_MIMAT0022031_Anolis_carolinensis_miR-5412-3p blat blast ugaaaauugcaauagaaaucgg ggucgcugggugauuuccaaa ugaaaauugcaauagaaaucgguagucgggaaggagaaggacgagccucuucaaaucucgguauugccuacuggucgcugggugauuuccaaa NW_025322676.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000184_whole_genome_shotgun_sequence:104129..104222:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_3367 1.5 72 72 0 0 no ssp-miR1432_MIMAT0020290_Saccharum_sp._miR1432 blat blast aucaggaaaagagccucuguu aagagacucuuuucucccguc aagagacucuuuucucccgucagcgaacaucaggaaaagagccucuguu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:3538240..3538289:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_53603 1.5 66 66 0 0 no bmo-miR-2818_MIMAT0013728_Bombyx_mori_miR-2818 blat blast aaagggaauucucggugg auuagggaugaccaagga aaagggaauucucgguggggugugugcguagguuugcgauaaauccauuagggaugaccaagga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:25126526..25126590:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_1259 1.5 10 10 0 0 no hsa-miR-4477b_MIMAT0019005_Homo_sapiens_miR-4477b blat blast cuuaaggacggugucuacuauugu aaagggaauuaccuccaaagagcu aaagggaauuaccuccaaagagcucaacuuaaggacggugucuacuauugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:1084760..1084811:+
NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence_674649 1.5 6 5 1 0 no hsa-miR-548g-3p_MIMAT0005912_Homo_sapiens_miR-548g-3p blat blast uaaacuguggaauggguu cccauuccacgucuuaaa uaaacuguggaauggguugccuccaaaaguuagagaaucuuuuaagauucucuaacuuuuggaggcaacccauuccacgucuuaaa NW_025322765.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000041_whole_genome_shotgun_sequence:434803..434889:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_300135 1.5 442 442 0 0 no bna-miR6032_MIMAT0023652_Brassica_napus_miR6032 blat blast uggagcauucguagagcugg aguuucaauuuuccaug uggagcauucguagagcuggaaaaaaaaugcauccaguuucaauuuuccaug NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:1018336..1018388:-
NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence_617837 1.4 48 48 0 0 no dme-miR-988-3p_MIMAT0005505_Drosophila_melanogaster_miR-988-3p blat blast ucccuugucugccaguaua gacugcuggacaauugauu ucccuugucugccaguauaaggucaccagcaacaaaaugcuuuagaagaccagacugcuggacaauugauu NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence:471504..471575:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_88965 1.4 3 1 0 2 no blat blast uauaugcagugagaauaguacu uacuauucucacugcauauaua uacuauucucacugcauauauaacuauuauauaugcagugagaauaguacu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:30875285..30875336:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_213156 1.4 48 48 0 0 no dme-miR-988-3p_MIMAT0005505_Drosophila_melanogaster_miR-988-3p blat blast ucccuugucugccaguaua gacugcuggacaauugauu ucccuugucugccaguauaaggucaccagcaacaaaaugcuuuagaagaccagacugcuggacaauugauu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:16385890..16385961:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_195659 1.4 456 456 0 0 no hsa-miR-5681a_MIMAT0022469_Homo_sapiens_miR-5681a blat blast ugaaaggguuuggguagacu uaacgcuugaucucucagc ugaaaggguuuggguagacuucaaagguaacgcuugaucucucagc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:23751686..23751732:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_525872 1.4 15 14 1 0 no bta-miR-2299-3p_MIMAT0011808_Bos_taurus_miR-2299-3p blat blast cccggggaaaaaccucuc aggguugcccaggggg aggguugcccagggggucaaucgcucgccaaauuacagaucaaagcaagcaaaucaguuuauuguuuuugaagagaggguaaaacccggggaaaaaccucuc NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:12910043..12910145:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_403175 1.4 6 6 0 0 no bmo-miR-2818_MIMAT0013728_Bombyx_mori_miR-2818 blat blast aaagggaaaaacgagcgcug gcgcugguuuuuucccuuucc aaagggaaaaacgagcgcugauaaucagcgcugguuuuuucccuuucc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:10866680..10866728:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_195845 1.4 456 456 0 0 no hsa-miR-5681a_MIMAT0022469_Homo_sapiens_miR-5681a blat blast ugaaaggguuuggguagacu uaacgcuugaucucucagc ugaaaggguuuggguagacuucaaagguaacgcuugaucucucagc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24139694..24139740:-
NW_025323129.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000571_whole_genome_shotgun_sequence_741177 1.4 6174 6168 0 6 no ppt-miR538a_MIMAT0003147_Physcomitrella_patens_miR538a blat blast uugcaugguuggcaggagguguacu aguucaucucguuguaaucaugc uugcaugguuggcaggagguguacuugcuuguccuaaaguucaucucguuguaaucaugc NW_025323129.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000571_whole_genome_shotgun_sequence:83665..83725:-
NW_025322680.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000189_whole_genome_shotgun_sequence_649109 1.4 48 48 0 0 no dme-miR-988-3p_MIMAT0005505_Drosophila_melanogaster_miR-988-3p blat blast ucccuugucugccaguaua gacugcuggacaauugauu ucccuugucugccaguauaaggucaccagcaacaaaaugcuuuagaagaccagacugcuggacaauugauu NW_025322680.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000189_whole_genome_shotgun_sequence:194822..194893:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_546099 1.4 38 38 0 0 no cel-miR-1824-3p_MIMAT0020360_Caenorhabditis_elegans_miR-1824-3p blat blast auuggccggaugguaagacugaacu gucagcuuaucugucgacuaauga auuggccggaugguaagacugaacuagaucagaagcaagauuggcuucagaaggucagcuuaucugucgacuaauga NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:16074712..16074789:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_402422 1.4 114 114 0 0 no dre-miR-457b-3p_MIMAT0032004_Danio_rerio_miR-457b-3p blat blast uccaguaugcagacauagaagugac gacugguuuguguuuggguguugguuu gacugguuuguguuuggguguugguuugggguuccaguaugcagacauagaagugac NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:9784691..9784748:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_72848 1.4 1292 1292 0 0 no mmu-miR-6957-3p_MIMAT0027815_Mus_musculus_miR-6957-3p blat blast uggaucucggaucagccu guucuuccagguuugug uggaucucggaucagccucccacuuccaucuuuguuaguggcguggguucuuccagguuugug NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:9282532..9282595:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_64326 1.4 5 3 0 2 no mmu-miR-540-5p_MIMAT0004786_Mus_musculus_miR-540-5p blat blast aaagggucaauuuuuucugu ugaacgaguguaccaugggagu aaagggucaauuuuuucuguuuguuuugcauuuagauaugaacgaguguaccaugggagu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:35423610..35423670:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_98837 1.4 8 8 0 0 no mmu-miR-296-3p_MIMAT0004576_Mus_musculus_miR-296-3p blat blast caggguugucgggucguucagcg cgugaaugaucucauaugccugccuggg caggguugucgggucguucagcgagauugagaagguuaccuaacgcgugaaugaucucauaugccugccuggg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:4589800..4589873:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_178844 1.4 26 26 0 0 no ppc-miR-8337-3p_MIMAT0033221_Pristionchus_pacificus_miR-8337-3p blat blast cuucgaugagacuggaaagggaua ucaauuuuuaguugaaauagaagag ucaauuuuuaguugaaauagaagagguauuugagacguaucuucgaugagacuggaaagggaua NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:3920984..3921048:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_419191 1.4 114 114 0 0 no dre-miR-457b-3p_MIMAT0032004_Danio_rerio_miR-457b-3p blat blast uccaguaugcagacauagaagugac uucuguuuggguguugguuu uucuguuuggguguugguuucggguuccaguaugcagacauagaagugac NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:9405193..9405243:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_282626 1.4 7 7 0 0 no dps-miR-2576_MIMAT0012422_Drosophila_pseudoobscura_miR-2576 blat blast uucgagugucagcuggucgucga gacgaagggcuaaugcucgcaac uucgagugucagcuggucgucgauuugcuucgacgaagggcuaaugcucgcaac NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:6504839..6504893:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_259292 1.4 8 8 0 0 no hsa-miR-1910-3p_MIMAT0026917_Homo_sapiens_miR-1910-3p blat blast uaggcagaaaguagccgacgucucu ggaugucggugcuuauugaaaccccugga uaggcagaaaguagccgacgucucugaucgaaguagccggugcucuucgucggaugucggugcuuauugaaaccccugga NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:13589018..13589098:+
NW_025322671.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000176_whole_genome_shotgun_sequence_643982 1.4 6 6 0 0 no bmo-miR-2818_MIMAT0013728_Bombyx_mori_miR-2818 blat blast aaagggaaaaacgagcgcug gcgcugguuuuuucccuuucc aaagggaaaaacgagcgcugauaaucagcgcugguuuuuucccuuucc NW_025322671.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000176_whole_genome_shotgun_sequence:64211..64259:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_278807 1.4 1000 1000 0 0 no oan-miR-1422i-3p_MIMAT0006894_Ornithorhynchus_anatinus_miR-1422i-3p blat blast aaaacugccgauuguccauga aaggaucacuucugguuguucuugg aaggaucacuucugguuguucuuggcgcugaucgucugaguucgaauucaaaugaucagcauaaaacugccgauuguccauga NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:765186..765269:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_138089 1.4 18 18 0 0 no hpo-miR-10048-5p_MIMAT0040620_Heligmosomoides_polygyrus_miR-10048-5p blat blast ccaggaugaugacgucuuuua gacgaugucgucguauacguc ccaggaugaugacgucuuuuaauuuccaucgucggacgaugucgucguauacguc NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:46481..46536:-
NW_025322689.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000203_whole_genome_shotgun_sequence_653206 1.4 8 8 0 0 no mtr-miR5753_MIMAT0023135_Medicago_truncatula_miR5753 blat blast cuuuugauuuauggcccacgu cuuggcgcauaaaucaaagggu cuuuugauuuauggcccacgugcuuugcacuuggcgcauaaaucaaagggu NW_025322689.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000203_whole_genome_shotgun_sequence:215989..216040:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_494981 1.4 1270 1270 0 0 no hsa-miR-3156-3p_MIMAT0019209_Homo_sapiens_miR-3156-3p blat blast aucccacuccugacacca augccaggagaggcacac augccaggagaggcacacgaauaaaaaaagagaaaaauaaagaaaagaacaaucccacuccugacacca NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:20283492..20283561:+
NW_025322681.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000192_whole_genome_shotgun_sequence_649559 1.4 48 48 0 0 no dme-miR-988-3p_MIMAT0005505_Drosophila_melanogaster_miR-988-3p blat blast ucccuugucugccaguaua gacugcuggacaauugauu ucccuugucugccaguauaaggucaccagcaacaaaaugcuuuagaagaccagacugcuggacaauugauu NW_025322681.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000192_whole_genome_shotgun_sequence:300336..300407:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_328205 1.3 20 20 0 0 no efu-miR-9273_MIMAT0034910_Eptesicus_fuscus_miR-9273 blat blast cacuauucacuggaugacucu aauuauuaguggauuauucu aauuauuaguggauuauucuaauuauugguggaaagcacuauccauuggauagaccacuauucacuggaugacucu NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:11848151..11848227:+
NW_025323114.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000551_whole_genome_shotgun_sequence_734112 1.3 6770 6770 0 0 no isc-miR-5312_MIMAT0021383_Ixodes_scapularis_miR-5312 blat blast uggcugaaaguguuugggu ccauacaucuucucacgaa ccauacaucuucucacgaacagcacgaaaacuccagaacugaguagcugugacuuggcugaaaguguuugggu NW_025323114.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000551_whole_genome_shotgun_sequence:187734..187807:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_299090 1.3 2598 2570 1 27 no rno-miR-328a-3p_MIMAT0000564_Rattus_norvegicus_miR-328a-3p blat blast auggcccuaucgaagcucagagc guuuugagucaaacuggugcc auggcccuaucgaagcucagagcaguucuucauacuguuuugagucaaacuggugcc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23976294..23976351:+
NW_025322914.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000269_whole_genome_shotgun_sequence_719984 1.3 39 39 0 0 no bmo-miR-3358_MIMAT0015544_Bombyx_mori_miR-3358 blat blast guuuguuacguacuuuuuag acagaagaaugaccugccc acagaagaaugaccugcccgguuuccacuggguuuguuacguacuuuuuag NW_025322914.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000269_whole_genome_shotgun_sequence:55602..55653:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_120932 1.3 63 63 0 0 no osa-miR5072_MIMAT0020552_Oryza_sativa_miR5072 blat blast cgauucccacuucugacacca guucaguugguggcgcucacg guucaguugguggcgcucacgacuucacgcgauucccacuucugacacca NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:33970680..33970730:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_514660 1.3 2 1 0 1 no sfr-miR-10473-3p_MIMAT0041829_Spodoptera_frugiperda_miR-10473-3p blat blast gacagauauucgacaagggcu uuuacucuguggauaaaucugccu uuuacucuguggauaaaucugccuuucaugcuauuggugacagauauucgacaagggcu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:2096221..2096280:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_372528 1.3 3796 3796 0 0 no mmu-miR-678_MIMAT0003452_Mus_musculus_miR-678 blat blast aucucggugggaccucca guaagccaggcaucgugguuc guaagccaggcaucgugguucugaucucggugggaccucca NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:13056198..13056239:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_249336 1.3 2 1 0 1 no tgu-miR-2954-5p_MIMAT0014623_Taeniopygia_guttata_miR-2954-5p blat blast ccugagagaaugacgacauu uuuuugugcaucuuuccugaa ccugagagaaugacgacauugaugagguugaucgguugccuuuucaguuuuugugcaucuuuccugaa NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:30796521..30796589:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_22476 1.3 86 86 0 0 no oan-miR-1422m-3p_MIMAT0007100_Ornithorhynchus_anatinus_miR-1422m-3p blat blast uggaaaauugaggaguaacagacu uuuuucuucaaugcgugacgac uggaaaauugaggaguaacagacuugugaaaagccaaguuuuucuucaaugcgugacgac NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:25741497..25741557:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_196245 1.3 12238 12238 0 0 no isc-miR-5312_MIMAT0021383_Ixodes_scapularis_miR-5312 blat blast uggcugaaaguguuugggu ccaaucguacauuuagauucu uggcugaaaguguuuggguagauuucaaagguaacgguugauuucucagccaaucguacauuuagauucu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24645477..24645547:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_102229 1.3 6 6 0 0 no bta-miR-2471-5p_MIMAT0012061_Bos_taurus_miR-2471-5p blat blast uaggaucuucccagugcuagg uagcgcuagggagauccuagc uaggaucuucccagugcuaggaucuuccuagcucacagcuaggaagauccuagcgcuagggagauccuagc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:9752288..9752359:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_246335 1.3 10 10 0 0 no mmu-miR-8094_MIMAT0031395_Mus_musculus_miR-8094 blat blast aacugaagcagcgguuugggaugcc cguucuauacccuucagccuc aacugaagcagcgguuugggaugccuggguaaguugccuucuaucaaauucagguaacacuuucauccguucuauacccuucagccuc NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:27729229..27729317:-
NW_025322619.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000050_whole_genome_shotgun_sequence_564339 1.3 6 6 0 0 no bmo-miR-2818_MIMAT0013728_Bombyx_mori_miR-2818 blat blast aaagggaaaaacgagcgcug gugcugguuuuuucccuuucc aaagggaaaaacgagcgcugauaaucagugcugguuuuuucccuuucc NW_025322619.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000050_whole_genome_shotgun_sequence:766062..766110:-
NW_025323150.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000593_whole_genome_shotgun_sequence_747731 1.2 4 3 0 1 no blat blast ucguucccaaggucucuuucc gagagacccucggaacgaugu ucguucccaaggucucuuuccgauuaguagagagacccucggaacgaugu NW_025323150.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000593_whole_genome_shotgun_sequence:11202..11252:+
NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence_567346 1.2 85 84 0 1 no gma-miR4397-3p_MIMAT0018312_Glycine_max_miR4397-3p blat blast ugucaaaguuggauaugu ucacuuugagcccuagga ugucaaaguuggauauguccauggucugagguccguggauuucacuuugagcccuagga NW_025322620.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000055_whole_genome_shotgun_sequence:590078..590137:+
NW_025322711.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000231_whole_genome_shotgun_sequence_662494 1.2 7 6 0 1 no gga-miR-1731-5p_MIMAT0007633_Gallus_gallus_miR-1731-5p blat blast cuugacucugaagaugacua ucuucagagucaagugacu ucuucagagucaagugacucuugacucugaagaugacua NW_025322711.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000231_whole_genome_shotgun_sequence:2377..2416:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_489448 1.2 7 7 0 0 no lja-miR7537_MIMAT0029363_Lotus_japonicus_miR7537 blat blast aaggaaauguggaaaacacgaga gcggcuguuuucuacauuucucgag aaggaaauguggaaaacacgagacacuggcggcuguuuucuacauuucucgag NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:13273549..13273602:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_228517 1.2 40 40 0 0 no cel-miR-1-5p_MIMAT0020301_Caenorhabditis_elegans_miR-1-5p blat blast gauacuucgaggguaagauugug uaaugccgcccaaauuaaaguuuggcga gauacuucgaggguaagauugugucagugugaaucagcaaauucgucccauaaugccgcccaaauuaaaguuuggcga NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:4898683..4898761:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_64905 1.2 15 15 0 0 no hpo-miR-10022-3p_MIMAT0040445_Heligmosomoides_polygyrus_miR-10022-3p blat blast ccuuucguugaggcaauuugcuug aguaaaucuuuaugacuggca ccuuucguugaggcaauuugcuugagaucgguaaaugcaaccacgugcuugguaaaauuaaguaaaucuuuaugacuggca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:36011889..36011970:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_78207 1.2 5 5 0 0 no oan-miR-1421am_MIMAT0007313_Ornithorhynchus_anatinus_miR-1421am blat blast cggaggucgcggguucgaaucc guucgaacccacgacccacgga guucgaacccacgacccacggaauugaucauuguugucauuuggugaucaauuccggaggucgcggguucgaaucc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:16738748..16738824:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_178852 1.2 26 26 0 0 no ppc-miR-8337-3p_MIMAT0033221_Pristionchus_pacificus_miR-8337-3p blat blast cuucgaugagacuggaaagggaua ucaauuuuuaguugaaauagagaggu ucaauuuuuaguugaaauagagagguauuugagacguaucuucgaugagacuggaaagggaua NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:3935057..3935120:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_545895 1.2 58 58 0 0 no dme-miR-976-5p_MIMAT0020873_Drosophila_melanogaster_miR-976-5p blat blast uuuggugaugguaaggaa ucuuccugugcacuaagaa ucuuccugugcacuaagaacucuuuuucaaagaaucauucucucugaaaguucuaucuuuuggugaugguaaggaa NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:15742489..15742565:-
NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence_616141 1.2 14 13 0 1 no dme-miR-6-1-5p_MIMAT0020787_Drosophila_melanogaster_miR-6-1-5p blat blast gggaauauguaagccacagacgcgu ucaugacugcucgauugccacagauuu ucaugacugcucgauugccacagauuugggaauauguaagccacagacgcgu NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence:128783..128835:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_365797 1.2 23 23 0 0 no hsa-miR-30b-3p_MIMAT0004589_Homo_sapiens_miR-30b-3p blat blast augggaggauguggaaug guucacuccccuucccaccc augggaggauguggaaugucucucaaccgaugguuccguaaagaaagaaaggaaaaguucacuccccuucccaccc NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:4605634..4605710:-
NW_025322773.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000081_whole_genome_shotgun_sequence_683320 1.2 2 1 0 1 no gma-miR5769_MIMAT0023166_Glycine_max_miR5769 blat blast agagggaaagaaacuggc aguuuucuuuuucauguuug agagggaaagaaacuggcuaaugcacaaccaacgggugauuaugcaaaaguuuucuuuuucauguuug NW_025322773.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000081_whole_genome_shotgun_sequence:533834..533902:-
NW_025322629.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000089_whole_genome_shotgun_sequence_594113 1.2 4 3 0 1 no blat blast ucguucccaaggucucuuucc gagagacccucggaacgaugu ucguucccaaggucucuuuccgguuaguagagagacccucggaacgaugu NW_025322629.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000089_whole_genome_shotgun_sequence:163662..163712:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_454605 1.1 28 28 0 0 no Adi-Mir-Novel-13_5p*_Acropora_digitifera_Gajigan_&_Conaco_2017_NA blat blast gauugauauccgucgucugauu ucggaacgauaguuaucagagga ucggaacgauaguuaucagaggauauccgccguccugauugauauccgucgucugauu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:15850233..15850291:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_116151 1.1 29 29 0 0 no mmu-miR-7063-5p_MIMAT0028030_Mus_musculus_miR-7063-5p blat blast cugagagggcuggaagguuguuga cgcaaucuaaaugccauuuuucgu cugagagggcuggaagguuguugaagauggggauugcacaacugacgaaggcauugugccguuuugcgcaaucuaaaugccauuuuucgu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:29046045..29046135:-
NW_025322867.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000216_whole_genome_shotgun_sequence_713367 1.1 8 8 0 0 no dps-miR-2562-3p_MIMAT0012387_Drosophila_pseudoobscura_miR-2562-3p blat blast uuaacaucauaaaaaggacaga guuucuuuuuguaauguuaagg guuucuuuuuguaauguuaagguuaucgcaccuuaacaucauaaaaaggacaga NW_025322867.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000216_whole_genome_shotgun_sequence:48272..48326:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_258931 1.1 7259 7218 41 0 no cin-miR-4057-5p_MIMAT0016603_Ciona_intestinalis_miR-4057-5p blat blast agcuuggcugaugucugaug acagagccagcaaugguuga acagagccagcaaugguugaacccacuguuccagcuucacuuacuugaacucaaacucagcuuggcugaugucugaug NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:12841996..12842074:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_126853 1.1 8 8 0 0 no sfr-miR-10451-5p_MIMAT0041767_Spodoptera_frugiperda_miR-10451-5p blat blast uuucaugccauauuuacucgaggu cucaggcuuugguagacacg cucaggcuuugguagacacggcccuuugugguuuuacaccccuguuuggucguuucaugccauauuuacucgaggu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:4780404..4780480:+
NW_025322779.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000103_whole_genome_shotgun_sequence_687373 1.1 10 10 0 0 no bdi-miR7770-3p_MIMAT0030291_Brachypodium_distachyon_miR7770-3p blat blast acuagacggguuccacguagaauu uucgacuuucacucguucuaguag acuagacggguuccacguagaauuagagugcuagacgcacucacgguuaguucgacuuucacucguucuaguag NW_025322779.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000103_whole_genome_shotgun_sequence:220607..220681:-
NW_025323203.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000653_whole_genome_shotgun_sequence_756593 1.1 17 17 0 0 no bmo-miR-2832_MIMAT0013746_Bombyx_mori_miR-2832 blat blast cuggauagaagaagacugggg ccgguuugguugucuaaug cuggauagaagaagacuggggaagcauuuuuccgguuugguugucuaaug NW_025323203.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000653_whole_genome_shotgun_sequence:32609..32659:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_372527 1.1 3796 3796 0 0 no mmu-miR-678_MIMAT0003452_Mus_musculus_miR-678 blat blast aucucggugggaccucca auuguugugccggcgguua aucucggugggaccuccaaaauaauuguugugccggcgguua NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:13056174..13056216:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_295613 1.1 24449 24435 14 0 no tca-miR-11646-3p_MIMAT0045620_Tribolium_castaneum_miR-11646-3p blat blast ugggugucaucuauuauguuuu aauguaacaaaauugacggccaga aauguaacaaaauugacggccagaagccguacguauguagaaaauguggggugagugccugggugucaucuauuauguuuu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:19030558..19030639:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_51972 1.1 559 559 0 0 no hsa-miR-5011-5p_MIMAT0021045_Homo_sapiens_miR-5011-5p blat blast uauauauaacuaacugcagauau gucugcaguuauauaucuaua gucugcaguuauauaucuauauaucuauauauauaucuauauauauauauaacuaacugcagauau NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:23656973..23657039:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_381728 1.1 13 13 0 0 no gra-miR8641_MIMAT0034262_Gossypium_raimondii_miR8641 blat blast cuuuuacuuugaacaaaau ugagcuugagguacggaggg cuuuuacuuugaacaaaaugcacagucgcuuucgaaucgucgagauaagauuccaggcauugagcuugagguacggaggg NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:4625204..4625284:+
NW_025323203.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000653_whole_genome_shotgun_sequence_756581 1.1 17 17 0 0 no bmo-miR-2832_MIMAT0013746_Bombyx_mori_miR-2832 blat blast cuggauagaagaagacugggg ccgguuugguugucuaaug cuggauagaagaagacuggggaagcauuuuuccgguuugguugucuaaug NW_025323203.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000653_whole_genome_shotgun_sequence:7153..7203:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_48601 1.1 6 6 0 0 no bta-miR-2471-5p_MIMAT0012061_Bos_taurus_miR-2471-5p blat blast uaggaucuucccagugcuagg uagcgcuaggaagauccaugu uaggaucuucccagugcuaggaucuuccuagcucacagcuaggaagaugcuagcgcuaggaagauccaugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:19355747..19355818:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_273715 1.1 7 7 0 0 no asu-miR-57-3p_MIMAT0021465_Ascaris_suum_miR-57-3p blat blast ucacgaucgaucuaaaacauuc auguuguagaucgaucguaaac ucacgaucgaucuaaaacauucuugcggauguuguagaucgaucguaaac NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:14454049..14454099:-
NW_025322751.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000272_whole_genome_shotgun_sequence_669788 1.1 48 48 0 0 no hsa-miR-574-5p_MIMAT0004795_Homo_sapiens_miR-574-5p blat blast cgagugugggucuuuucucuuugg aaagacaagagacguuugua cgagugugggucuuuucucuuugguguuaucaaagacaagagacguuugua NW_025322751.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000272_whole_genome_shotgun_sequence:49232..49283:+
NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence_560497 1.1 57 57 0 0 no esi-miR3462-3p_MIMAT0017778_Ectocarpus_siliculosus_miR3462-3p blat blast uuucgggaauuguguguggca ccgccucugcuccuucagaaaca uuucgggaauuguguguggcaaaaccuucaucagccgccucugcuccuucagaaaca NW_025322618.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000038_whole_genome_shotgun_sequence:1873587..1873644:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_68230 1.0 2 1 0 1 no vvi-miR3634-3p_MIMAT0018040_Vitis_vinifera_miR3634-3p blat blast uuuccgacacgccgcugcagaagu acguggagguugaacagugu uuuccgacacgccgcugcagaaguuaauuagguaauuacguggagguugaacagugu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:1754409..1754466:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_223199 1.0 38 38 0 0 no pta-miR159a_MIMAT0004990_Pinus_taeda_miR159a blat blast uuggauuguagucggugcca gaacugcucauuuccaaaa gaacugcucauuuccaaaacuuugaacaaguugacauauguaaugguucucguuuggauuguagucggugcca NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:28473855..28473928:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_532378 1.0 2 1 0 1 no ppt-miR1211-3p_MIMAT0004829_Physcomitrella_patens_miR1211-3p blat blast cgcaugacgucgagguaa cccggugccacgaacguc cgcaugacgucgagguaacacgucguugcccggugccacgaacguc NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:3518949..3518995:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_517732 1.0 194 140 54 0 no blat blast ugcgaucgcaacuuauaacuug aguuauaacuugcgauugcgac aguuauaacuugcgauugcgacuuauaacuugcgaucgcaacuuauaacuugcgaucgcaaguuauaacuugcgaucgcaacuuauaacuug NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:7012845..7012937:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_382876 1.0 15 15 0 0 no hpo-miR-10022-3p_MIMAT0040445_Heligmosomoides_polygyrus_miR-10022-3p blat blast ccuuucguugaggcaauuugcuug aguaaaucuuuaugacuggca ccuuucguugaggcaauuugcuugagaucgguaaaugcaaccacgugcuugguaaaauuaaguaaaucuuuaugacuggca NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:6080131..6080212:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_250907 1.0 13 13 0 0 no cre-miR908.1_MIMAT0004965_Chlamydomonas_reinhardtii_miR908.1 blat blast ugagaagaacaugcagug uuggggacuuguuuaaaucaau uuggggacuuguuuaaaucaauggccuuggauuacgugauuuguucucauguugguuuuugagaagaacaugcagug NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:1737190..1737267:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_288918 1.0 15 15 0 0 no hpo-miR-10022-3p_MIMAT0040445_Heligmosomoides_polygyrus_miR-10022-3p blat blast ccuuucguugaggcaauuugcuug aguaaaucuuuaugacuggca ccuuucguugaggcaauuugcuugagaucgguaaaugcaaccacgugcuugguaaaauuaaguaaaucuuuaugacuggca NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:11842831..11842912:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_533061 1.0 179 179 0 0 no ppc-miR-2238b_MIMAT0011682_Pristionchus_pacificus_miR-2238b blat blast uaugacaaaugaauugccaaguu cuuggcaaucuauuuguuaaaca uaugacaaaugaauugccaaguuuuaaaaccuuggcaaucuauuuguuaaaca NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:4293002..4293055:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_32777 1.0 6 6 0 0 no ame-miR-3765-5p_MIMAT0018539_Apis_mellifera_miR-3765-5p blat blast caagaaaauacaagugacugua caagucacuuguauuuucuagcu caagucacuuguauuuucuagcuauacacacccggcugaaggcucggguguauaccaagaaaauacaagugacugua NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:38207346..38207423:+
NW_025322751.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000272_whole_genome_shotgun_sequence_669784 1.0 48 48 0 0 no hsa-miR-574-5p_MIMAT0004795_Homo_sapiens_miR-574-5p blat blast cgagugugggucuuuucucuuugg aaagacaagagagagacguuugua cgagugugggucuuuucucuuugguguuaucaaagacaagagagagacguuugua NW_025322751.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000272_whole_genome_shotgun_sequence:47897..47952:+
NW_025322781.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000107_whole_genome_shotgun_sequence_688217 1.0 93 93 0 0 no osa-miR395f_MIMAT0000974_Oryza_sativa_miR395f blat blast cugaauuguaaaagcuua agcuugggauucguca agcuugggauucgucauacugaauuguaaaagcuua NW_025322781.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000107_whole_genome_shotgun_sequence:199876..199912:+
NW_025322641.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000121_whole_genome_shotgun_sequence_613258 1.0 11 11 0 0 no pab-miR11409b_MIMAT0044952_Picea_abies_miR11409b blat blast cuauuugaagacggugau cgccaacuagcaaaugua cuauuugaagacggugaugucuuuacaucuauuguggcaaugcgggaagccacaaauguucgccaacuagcaaaugua NW_025322641.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000121_whole_genome_shotgun_sequence:525370..525448:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_78849 1.0 16 16 0 0 no ath-miR3440b-5p_MIMAT0017945_Arabidopsis_thaliana_miR3440b-5p blat blast cuuucuugggcuguggcu cgauccuguuucaagaccuug cgauccuguuucaagaccuuguaaacuuuggaguuagcacuuucuugggcuguggcu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:17424557..17424614:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_414876 1.0 9 9 0 0 no ptc-miR482a.2_MIMAT0006785_Populus_trichocarpa_miR482a.2 blat blast ucuugccugggacaacuuuuc aaaguugacucggcuagcagg aaaguugacucggcuagcaggguggcccucuugccugggacaacuuuuc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:2798547..2798596:+
NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence_733187 1.0 11 11 0 0 no aly-miR4221_MIMAT0017909_Arabidopsis_lyrata_miR4221 blat blast gagaguucuuucuugauu uggagcaggagcuggagc gagaguucuuucuugauuugccgcuucaucgaagguuuuucggcgaauuuuauaaagaggaaguacaggcauuggagcaggagcuggagc NW_025323113.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000550_whole_genome_shotgun_sequence:43593..43683:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_166352 1.0 23 23 0 0 no mmu-miR-743a-3p_MIMAT0004238_Mus_musculus_miR-743a-3p blat blast uaaagacagaauuccucucccau ggaagggugucaacugcucuucaac uaaagacagaauuccucucccauagaucaaauggaagggugucaacugcucuucaac NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:16048960..16049017:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_235327 1.0 7 6 0 1 no cel-miR-243-3p_MIMAT0000299_Caenorhabditis_elegans_miR-243-3p blat blast agguacgacugaauaagauug caaucuuauuuagucguaccaaa agguacgacugaauaagauuguuucuaaacaaucuuauuuagucguaccaaa NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:13402017..13402069:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_529300 1.0 3 2 0 1 no mmu-miR-3082-5p_MIMAT0014872_Mus_musculus_miR-3082-5p blat blast gacagaguagcaacagaagaaauu ccuuuucugucugcugaauuuc ccuuuucugucugcugaauuucuaauggacagaguagcaacagaagaaauu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:17087581..17087632:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_474916 1.0 2392 2392 0 0 no mmu-miR-1190_MIMAT0005847_Mus_musculus_miR-1190 blat blast gcagcugaugauuucuccuuucu ggaugggugaguuuuuuguuguuu ggaugggugaguuuuuuguuguuuuucuuuucauuguaggcaagugagcagcugaugauuucuccuuucu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:16957327..16957397:-
NW_025322705.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000224_whole_genome_shotgun_sequence_659905 1.0 10 10 0 0 no pal-miR-10011-5p_MIMAT0040320_Pteropus_alecto_miR-10011-5p blat blast cgggcauuugaacucuuga uggaucguugaaauucccgcg cgggcauuugaacucuugaagauuggaucguugaaauucccgcg NW_025322705.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000224_whole_genome_shotgun_sequence:154322..154366:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_455935 1.0 62 62 0 0 no csi-miR482c-5p_MIMAT0037416_Citrus_sinensis_miR482c-5p blat blast ugaauuggguacaacauugagu ucgaucuuuaccuagagagau ucgaucuuuaccuagagagauuugaauuggguacaacauugagu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17589022..17589066:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_529953 0.9 6 6 0 0 no sme-miR-754a_MIMAT0004021_Schmidtea_mediterranea_miR-754a blat blast auugcuugggcuacuugaggcgc uacuugaggugcuuaggcuacuu auugcuugggcuacuugaggcgcuugggcuaccuuaggugcuuaaccuacuugaggugcuuaggcuacuugaggugcuuaggcuacuu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:507965..508053:-
NW_025322652.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000145_whole_genome_shotgun_sequence_627073 0.9 27 27 0 0 no hsa-miR-10226_MIMAT0041128_Homo_sapiens_miR-10226 blat blast ucauguguacuauagguggccu cccacaaauauaguaaauauguuu cccacaaauauaguaaauauguuugaucauguguacuauagguggccu NW_025322652.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000145_whole_genome_shotgun_sequence:189557..189605:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_82147 0.9 8 7 0 1 no hsa-miR-6762-5p_MIMAT0027424_Homo_sapiens_miR-6762-5p blat blast uggggccagaaauugaagu acuucaauucaugagccuugu acuucaauucaugagccuugugcuuuccacuggggccagaaauugaagu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:22213144..22213193:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_2248 0.9 2 1 0 1 no hsa-miR-4659a-5p_MIMAT0019726_Homo_sapiens_miR-4659a-5p blat blast uugccaugcguuuguucag aggacagacgcauaagugac aggacagacgcauaagugacgucacuguuaacuuuuucacuuuuuuauuguguaaaacagauucuuuguugccaugcguuuguucag NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:2264585..2264672:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_127449 0.9 8 8 0 0 no cin-miR-4172-3p_MIMAT0016780_Ciona_intestinalis_miR-4172-3p blat blast uauuauguuaauuuguagaucuguc caggucucaaaaguguugguuau caggucucaaaaguguugguuaugaaugacagccuugcuguaacauuauuauguuaauuuguagaucuguc NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:5680037..5680108:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_325132 0.9 6 4 0 2 no blat blast ugugucaugaagccugaaaaagca cuuugaggauucauaaugcaau ugugucaugaagccugaaaaagcacaucaaggugcuuugaggauucauaaugcaau NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:7861407..7861463:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_187974 0.9 2 1 0 1 no ppt-miR902j-5p_MIMAT0005083_Physcomitrella_patens_miR902j-5p blat blast uuauguugggguuugggcauuuuug agucuaaaccaugcaaucguc agucuaaaccaugcaaucgucgcuuauguugggguuugggcauuuuug NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:15513914..15513962:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_231909 0.8 26 26 0 0 no mdo-miR-7262l-3p_MIMAT0050293_Monodelphis_domestica_miR-7262l-3p blat blast auaaacugugcccucugucuuu ggacacgggcgguauccua auaaacugugcccucugucuuugauacuaccagcggacacgggcgguauccua NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:9740231..9740284:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_367228 0.8 30 30 0 0 no hsa-miR-412-3p_MIMAT0002170_Homo_sapiens_miR-412-3p blat blast ccuucaccuguacgaauaaagagcu gguuuuauugauacagugcauuau gguuuuauugauacagugcauuauuucaaucguaaauauauuacauuggauuccuucaccuguacgaauaaagagcu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:7500770..7500847:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_146456 0.8 51 51 0 0 no gga-miR-1640_MIMAT0007515_Gallus_gallus_miR-1640 blat blast gugucacugaauuucgga cgagauucuagacuucaa cgagauucuagacuucaaaacuuguuucacuuuugugauugccauuuugugucacugaauuucgga NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:10837705..10837771:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_53887 0.8 10 10 0 0 no mmu-miR-141-3p_MIMAT0000153_Mus_musculus_miR-141-3p blat blast aaacacuggauggugggagaaug agauucaagaaacauuucuaacuuuucg aaacacuggauggugggagaaugcuuggaacaauaauaauuguuuggaggcaagauucaagaaacauuucuaacuuuucg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:25630238..25630318:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_6379 0.8 15 15 0 0 no hpo-miR-10022-3p_MIMAT0040445_Heligmosomoides_polygyrus_miR-10022-3p blat blast ccuuucguugaggcaauuugcuug agcgauggugaccucaggauuuugcc agcgauggugaccucaggauuuugcccgaggccuuucguugaggcaauuugcuug NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:5926015..5926070:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_77200 0.8 9 9 0 0 no hma-mir-new70_Hydra_magnipapillata_Krishna_et_al._2013_NA blat blast ucucguacccagaucucaca agagaucugauaaugagauu ucucguacccagaucucacacaggaaaacgcuagagaucugauaaugagauu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:15211656..15211708:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_268062 0.8 31 9 10 12 no blat blast uguccgcgaguauuauauguu auauaauacgcgcggauauu auauaauacgcgcggauauuuugcgaguugcgugguauuuuuccgagccccgcaggggcgaggaaaaaugcgagcaaugagcgaaauguccgcgaguauuauauguu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:6219223..6219330:-
NW_025322623.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000066_whole_genome_shotgun_sequence_582219 0.8 50 50 0 0 no eca-miR-8919_MIMAT0034447_Equus_caballus_miR-8919 blat blast gucaggauggccgagcga gccaguuuccucgaaag gccaguuuccucgaaagccgucaggauggccgagcga NW_025322623.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000066_whole_genome_shotgun_sequence:1357628..1357665:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_130902 0.8 57 57 0 0 no dme-miR-966-5p_MIMAT0005481_Drosophila_melanogaster_miR-966-5p blat blast uguggguuaucugugggug uauacaggcaccacugg uguggguuaucugugggugagaucggacaucaucauauacaggcaccacugg NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:10856679..10856731:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_367190 0.8 30 30 0 0 no hsa-miR-412-3p_MIMAT0002170_Homo_sapiens_miR-412-3p blat blast ccuucaccuguacgaauaaagagcu gguuuuauugauacagugcauuau gguuuuauugauacagugcauuauuucaaucguaaauauauuacauuggauuccuucaccuguacgaauaaagagcu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:7467131..7467208:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_204550 0.8 1254 1235 0 19 no blat blast agugacagagugagaucugggu ucacucugucacuggaacauuucc ucacucugucacuggaacauuuccagugacagagugagaucugggu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:6915741..6915787:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_38545 0.8 12 12 0 0 no osa-miR1874-5p_MIMAT0007827_Oryza_sativa_miR1874-5p blat blast aagggcuagugaaacugu agugauacacaaccuuucg agugauacacaaccuuucguauaugcauaaucugaaugagaucggagcugggaaucacuuggaugagucauucacuuauuagaagggcuagugaaacugu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:6653082..6653182:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_349312 0.8 11 11 0 0 no ata-miR2275c-5p_MIMAT0037226_Aegilops_tauschii_miR2275c-5p blat blast cguguugggauacagagaacugagc uaggauugguguaaccuaucgug cguguugggauacagagaacugagcagauuggauaggauugguguaaccuaucgug NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:4074591..4074647:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_515503 0.7 6 6 0 0 no gma-miR1520f-3p_MIMAT0018244_Glycine_max_miR1520f-3p blat blast uaaucagacaggccaaauugga ugauuugaccugugugaauaca ugauuugaccugugugaauacaaacauuauuuuguaaucagacaggccaaauugga NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:3320607..3320663:+
NW_025322615.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000015_whole_genome_shotgun_sequence_550287 0.7 17 17 0 0 no hsa-miR-17-3p_MIMAT0000071_Homo_sapiens_miR-17-3p blat blast acugcagugauuuguuggaggcgu guuuccagacgagggcaccaguaguag acugcagugauuuguuggaggcguuuggaaaauuggcugucgacgacgaacaaagcguuguaaaguuuccagacgagggcaccaguaguag NW_025322615.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000015_whole_genome_shotgun_sequence:291640..291731:-
NW_025323108.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000539_whole_genome_shotgun_sequence_730716 0.7 10 10 0 0 no mml-miR-216a-3p_MIMAT0026848_Macaca_mulatta_miR-216a-3p blat blast ucagugguuagagcauucgacu ucguggguuuaaaucccaucugggc ucagugguuagagcauucgacuaaaucagcgagggucguggguuuaaaucccaucugggc NW_025323108.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000539_whole_genome_shotgun_sequence:366036..366096:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_300731 0.7 99 99 0 0 no mmu-miR-700-5p_MIMAT0017256_Mus_musculus_miR-700-5p blat blast aaaggcucgcgccaggau caacggaaaacgugagucgacau aaaggcucgcgccaggauaccgagagcuguuaaauauaagugucaacggaaaacgugagucgacau NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:1622205..1622271:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_100232 0.7 28 28 0 0 no blat blast uccgcuagcggauauggacc uccaaauccgcuagcggaua uccaaauccgcuagcggauauggaccggggggguccaaauccgcuagcggauauggacc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:6771581..6771640:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17842 0.7 46 46 0 0 no ppt-miR408b_MIMAT0005050_Physcomitrella_patens_miR408b blat blast agcacugcacugauggggccc ggaucauuuuuggaguggaca agcacugcacugauggggcccagagaagaccguacuuuuggggaucauuuuuggaguggaca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:21164791..21164853:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_17664 0.7 10 10 0 0 no osa-miR5494_MIMAT0022127_Oryza_sativa_miR5494 blat blast guauaggacuuuggaaacccugauu ucaccuuuucuuauuuaagaacuaccccu guauaggacuuuggaaacccugauuaggucgcgauugcaacuccaauuacaucuuucaccuuuucuuauuuaagaacuaccccu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:20832499..20832583:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_291013 0.7 67 66 1 0 no gra-miR8719_MIMAT0034108_Gossypium_raimondii_miR8719 blat blast gaaauuggugaucggggcgg gcucacuggguuaccauaaaaaa gcucacuggguuaccauaaaaaagccauugaguaucaugaaaaacguuugacaauugcauuugaaauuggugaucggggcgg NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:14228704..14228786:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_95862 0.7 163 163 0 0 no bdi-miR7748a-3p_MIMAT0030237_Brachypodium_distachyon_miR7748a-3p blat blast uauauguuggauuguggucgg gaucaguccuaaaacuuuaaa gaucaguccuaaaacuuuaaacaaguuugcaaaugugcuguuuauauguuggauuguggucgg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:540622..540685:-
NW_025322658.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000152_whole_genome_shotgun_sequence_632555 0.7 142 63 0 79 no hsa-miR-4493_MIMAT0019028_Homo_sapiens_miR-4493 blat blast agaaggccgaaacaguacugu aucgcuucucggccuuuuggc agaaggccgaaacaguacuguucaguggaucgcuucucggccuuuuggc NW_025322658.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000152_whole_genome_shotgun_sequence:155325..155374:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_198755 0.7 103 103 0 0 no blat blast ucaugggcuauugacucggagcc cucugagucaaaagcgcauucga cucugagucaaaagcgcauucgaccuuaagccucaugggcuauugacucggagcc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:27452582..27452637:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_125571 0.7 3 2 0 1 no cte-miR-2710_MIMAT0013579_Capitella_teleta_miR-2710 blat blast accacuguaagauuacguag aacuguaaucuucucaagu accacuguaagauuacguagguguugcaaacuguaaucuucucaagu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:3000945..3000992:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_512651 0.7 377 323 54 0 no blat blast ugcgaucgcgacuuauaacuug acuuauaaguugcgaucgcgac acuuauaaguugcgaucgcgacuuauagcuugcgaucgcaaguuauaacuugcgaucgcgacuuauaacuug NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:22327874..22327946:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_300552 0.7 204 203 0 1 no sja-miR-3485-3p_MIMAT0016291_Schistosoma_japonicum_miR-3485-3p blat blast auuuacuguugacuugacgca gaaggucacaaguagaau auuuacuguugacuugacgcauuuagaguagaugaaggucacaaguagaau NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:1296693..1296744:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_171661 0.7 1310 1302 0 8 no blat blast uuccagugacagagugagaucu agaucucacucugucacugg agaucucacucugucacuggaaaucucacauuuccagugacagagugagaucu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:23465934..23465987:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_432911 0.6 19 18 1 0 no blat blast uucgcgcuuguuggauaugaga ucauauccaacgcacgcucaug uucgcgcuuguuggauaugagacggguuauagccaacgaggugcuacgugccucguuggcuauuuaccaucucauauccaacgcacgcucaug NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:6422826..6422919:-
NW_025322638.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000115_whole_genome_shotgun_sequence_609505 0.6 41 38 0 3 no ptc-miR7840_MIMAT0030397_Populus_trichocarpa_miR7840 blat blast caaggaguaaucgggcgagug uacgagcaugcuuaccccug caaggaguaaucgggcgagugauuugaaauuacgagcaugcuuaccccug NW_025322638.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000115_whole_genome_shotgun_sequence:668748..668798:+
NW_025322799.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000137_whole_genome_shotgun_sequence_697522 0.6 60 60 0 0 no cfa-miR-8792_MIMAT0034282_Canis_familiaris_miR-8792 blat blast uaugagcaacagucgugaagagguu ccacucucaaaaggcaaaucagcuccaucu ccacucucaaaaggcaaaucagcuccaucucauugugcaccaccacacuugcaaauguuuaugagcaacagucgugaagagguu NW_025322799.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000137_whole_genome_shotgun_sequence:282918..283002:-
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_128786 0.6 7 5 0 2 no bta-miR-2481_MIMAT0012073_Bos_taurus_miR-2481 blat blast uacguugucggaucaaagcc ugggaucucaaugaauaac uacguugucggaucaaagccccaagccuacaagacuagacugaaggggaauaugggaucucaaugaauaac NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:7511663..7511734:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_433663 0.6 7 7 0 0 no hpo-miR-10046-5p_MIMAT0040614_Heligmosomoides_polygyrus_miR-10046-5p blat blast aucccgucuauagucaaccaucugu agaaggcugugguaaugaucc aucccgucuauagucaaccaucuguggugaucugcagaaggcugugguaaugaucc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:7699129..7699185:-
NW_025323114.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000551_whole_genome_shotgun_sequence_734051 0.6 880 880 0 0 no isc-miR-5312_MIMAT0021383_Ixodes_scapularis_miR-5312 blat blast gggcugaaaguguuugggc uaauugugcauuuagauucuccaa gggcugaaaguguuugggcagauuucaaagguaacgcuugauuucucagcuaauugugcauuuagauucuccaa NW_025323114.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000551_whole_genome_shotgun_sequence:151770..151844:-
NW_025322649.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000138_whole_genome_shotgun_sequence_624391 0.6 355 354 0 1 no blat blast uacucgcccgauuacucccugaau auucagggaguaaucgugcucg auucagggaguaaucgugcucgugauuucaaauuggccucgcgcuucacgcucggccaauuucaaaauuacucgcccgauuacucccugaau NW_025322649.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000138_whole_genome_shotgun_sequence:56959..57051:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_472685 0.6 7 7 0 0 no bmo-miR-6498-3p_MIMAT0025324_Bombyx_mori_miR-6498-3p blat blast cacgucugaucuguaugggu ucauaaagauuucccgcuca cacgucugaucuguauggguguuuacaauggcuugccuucagcuugccauuguaaaggcucauaaagauuucccgcuca NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:13170104..13170183:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_39817 0.6 1245 1235 0 10 no blat blast uuccagugacagagugagaucu ucacucugucacuggaaaugu ucacucugucacuggaaaugucacauuuccagugacagagugagaucu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:8708733..8708781:-
NW_025322638.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000115_whole_genome_shotgun_sequence_609415 0.6 9 9 0 0 no pte-miR-11955-3p_MIMAT0046293_Parasteatoda_tepidariorum_miR-11955-3p blat blast uucagaaguuuccaggcuugacagu cgaccggccucgacgcgcgaugaacc cgaccggccucgacgcgcgaugaaccucuuaaggcuucuuagaaauucagaaguuuccaggcuugacagu NW_025322638.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000115_whole_genome_shotgun_sequence:503326..503396:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_84174 0.6 8 6 0 2 no ppt-miR902h-5p_MIMAT0005079_Physcomitrella_patens_miR902h-5p blat blast cuaugaugucccucuuggccugau ccaggggcccguuucucgaaagu cuaugaugucccucuuggccugauagauugguggagcacugcacagguauguaagaggccaggggcccguuucucgaaagu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:25139661..25139742:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_434322 0.6 31 31 0 0 no gma-miR1524_MIMAT0007385_Glycine_max_miR1524 blat blast cgaguccggauaaucgagguu cucucgauuauugggaccaaucagc cucucgauuauugggaccaaucagccgaguccguacgaguccggauaaucgagguu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:8718629..8718685:-
NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence_607152 0.6 59 59 0 0 no ppt-miR319d-5p.2_MIMAT0004326_Physcomitrella_patens_miR319d-5p.2 blat blast uggcugagaguguuugggu caggacgaaaaucucucaacugag caggacgaaaaucucucaacugaguggcugugacuuggcugagaguguuugggu NW_025322636.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000107_whole_genome_shotgun_sequence:38487..38541:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_175273 0.6 4774 4774 0 0 no aga-miR-2b-5p_MIMAT0041564_Anopheles_gambiae_miR-2b-5p blat blast ucucaaaguuggauguguc uaaucagacgauuuugaaacg uaaucagacgauuuugaaacguucucaaaguuggauguguc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:27533777..27533818:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_432802 0.6 6 5 1 0 no sme-miR-2162-3p_MIMAT0012153_Schmidtea_mediterranea_miR-2162-3p blat blast auauuauggagauguggaauu cuccauaucuucaaguaacc auauuauggagauguggaauuuuucuucuaguguucaaauucgauaucucacucgaguugacaccagaagagagacuccauaucuucaaguaacc NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:6248078..6248173:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_318350 0.6 8 8 0 0 no ath-miR162a-3p_MIMAT0000182_Arabidopsis_thaliana_miR162a-3p blat blast ucgauaaauauucugcuucuauu uaguggcagaauacuuaccucgcug uaguggcagaauacuuaccucgcugcuucgccgcucgauaaauauucugcuucuauu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:23651057..23651114:-
NW_025322727.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000247_whole_genome_shotgun_sequence_665798 0.6 11 11 0 0 no hvt-miR-H15-3p_MIMAT0012869_Herpesvirus_of_miR-H15-3p blat blast caaagauagggccuuacugg aguagcugugaaucaaggu caaagauagggccuuacuggagcuaaguccaguagcugugaaucaaggu NW_025322727.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000247_whole_genome_shotgun_sequence:88208..88257:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_39130 0.6 8 8 0 0 no hsa-miR-3655_MIMAT0018075_Homo_sapiens_miR-3655 blat blast gcuugucgagaagguuucacugg agaaacgauacuauugaaugugu agaaacgauacuauugaauguguaaacaccagcgggucguccaugugcgcuugucgagaagguuucacugg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:7593138..7593209:-
NW_025323136.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000578_whole_genome_shotgun_sequence_743906 0.6 36 36 0 0 no cin-miR-4193-5p_MIMAT0016811_Ciona_intestinalis_miR-4193-5p blat blast uuguuuaaccaguuggaca uuaacuuuucccugagcagca uuaacuuuucccugagcagcaauuuuguuuaaccaguuggaca NW_025323136.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000578_whole_genome_shotgun_sequence:69916..69959:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_401162 0.6 3055 3055 0 0 no osa-miR439a_MIMAT0001589_Oryza_sativa_miR439a blat blast ggucgaacuugaucguuuagagga cuaccgaucaaauuuagugacgcccu cuaccgaucaaauuuagugacgcccucucagcugaauggugcuuuauugugcgguuugcuauagucggucgaacuugaucguuuagagga NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:8139836..8139926:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_196067 0.6 880 880 0 0 no isc-miR-5312_MIMAT0021383_Ixodes_scapularis_miR-5312 blat blast gggcugaaaguguuugggc uaauugugcauuuagauucuccaa gggcugaaaguguuugggcagauuucaaagguaacgcuugauuucucagcuaauugugcauuuagauucuccaa NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24342523..24342597:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_494719 0.6 8 8 0 0 no ath-miR162a-3p_MIMAT0000182_Arabidopsis_thaliana_miR162a-3p blat blast ucgauaaauauucugcuucuauu uaguggcagaauacuuaccucgcug uaguggcagaauacuuaccucgcugcuucgccgcucgauaaauauucugcuucuauu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:19868886..19868943:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_69068 0.5 65 65 0 0 no ssc-miR-9850-5p_MIMAT0037069_Sus_scrofa_miR-9850-5p blat blast aggaaaucuggguuugacu ucaacugccacugugcgucuuug aggaaaucuggguuugacuuagucaugauuggucaacugccacugugcgucuuug NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:3106828..3106883:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_479682 0.5 86 86 0 0 no blat blast ucuaucuucugcgaucgucugc aggagaucgcagaaguguguuu ucuaucuucugcgaucgucugcgaucacgaucgcaggagaucgcagaaguguguuu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:23081022..23081078:-
NW_025322647.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000136_whole_genome_shotgun_sequence_621903 0.5 164 164 0 0 no blat blast ucaugggcuauugacucgu gggucaauagcccauucgg gggucaauagcccauucggcuuaccucaugggcuauugacucgu NW_025322647.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000136_whole_genome_shotgun_sequence:700446..700490:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_193881 0.5 5 5 0 0 no mdo-miR-875-3p_MIMAT0026949_Monodelphis_domestica_miR-875-3p blat blast aggaaauguggaaaacacgagc gagugguuucuacauuucucga aggaaauguggaaaacacgagcugcaggcgagugguuucuacauuucucga NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:21468497..21468548:-
NW_025323101.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000522_whole_genome_shotgun_sequence_725854 0.5 95 93 2 0 no sko-miR-4827a_MIMAT0020034_Saccoglossus_kowalevskii_miR-4827a blat blast aaauguaucaucgugugcuuauucu agagagcgugauguguacgugaag aaauguaucaucgugugcuuauucuuguggaggaacuucaacacacagagagagcgugauguguacgugaag NW_025323101.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000522_whole_genome_shotgun_sequence:630062..630134:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_347775 0.5 6 2 0 4 no eca-miR-514b_MIMAT0034706_Equus_caballus_miR-514b blat blast ucauuccaccacccuagccaugc gcaaagggcuaggaugguggaaagagca gcaaagggcuaggaugguggaaagagcauaugacucauuccaccacccuagccaugc NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:2048287..2048344:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_318995 0.5 8 8 0 0 no mmu-miR-182-3p_MIMAT0016995_Mus_musculus_miR-182-3p blat blast uugguucuugguuagcgugcacc ugcacccuaaccaucaaccauua ugcacccuaaccaucaaccauuaauuuuauugguucuugguuagcgugcacc NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:214926..214978:+
NW_025322866.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000215_whole_genome_shotgun_sequence_713317 0.5 51 49 0 2 no blat blast ucaugggcuauugacucagagcc uuugagucaguagcccauucgg uuugagucaguagcccauucggccuucaggcucaugggcuauugacucagagcc NW_025322866.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000215_whole_genome_shotgun_sequence:107789..107843:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_87399 0.5 6 6 0 0 no mmu-miR-7042-3p_MIMAT0027989_Mus_musculus_miR-7042-3p blat blast ugucccuuuagaauuuguugu ggcuuggucuggagucaguugcg ggcuuggucuggagucaguugcgccgaguucgcaagaacagauuugucgugucccuuuagaauuuguugu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:29932424..29932494:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_391020 0.5 8 8 0 0 no sfr-miR-13a-5p_MIMAT0041906_Spodoptera_frugiperda_miR-13a-5p blat blast uugucaaagauggcgugaugaaca gucgucgcgaucugaaaaau uugucaaagauggcgugaugaacagugccaugucgucgcgaucugaaaaau NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:16837268..16837319:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_126513 0.5 2 1 0 1 no gma-miR1535a_MIMAT0007398_Glycine_max_miR1535a blat blast guuguuugguaguuagcu gcugacgucgaaaaaacaaugaac guuguuugguaguuagcuaaaucacuucuaagaaggcugacgucgaaaaaacaaugaac NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:4377118..4377177:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_374134 0.5 2 1 0 1 no gma-miR1535a_MIMAT0007398_Glycine_max_miR1535a blat blast guuguuugguaguuagcu gcugacgucgaaaaaacaaugaac guuguuugguaguuagcuaaaucacuucuaagaaggcugacgucgaaaaaacaaugaac NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:15742839..15742898:-
NW_025322637.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000109_whole_genome_shotgun_sequence_608386 0.5 124 124 0 0 no avi-miR-temp-13_Anemonia_viridis_Urbarova_et_al._2018_NA blat blast uuacugaauagacgcacggu uuguuuuauacaguaaag uuacugaauagacgcacgguagcacggaagcuauuuguuuuauacaguaaag NW_025322637.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000109_whole_genome_shotgun_sequence:834978..835030:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_37702 0.5 6 6 0 0 no cin-miR-4119-3p_MIMAT0016711_Ciona_intestinalis_miR-4119-3p blat blast ccgaaugggcucugagucaau ugacuaagagggcaugagggc ccgaaugggcucugagucaauagcgcaugaggccgaaggccaaauggacuauugacuaagagggcaugagggc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:5283297..5283370:-
NW_025323144.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000587_whole_genome_shotgun_sequence_746258 0.5 35 35 0 0 no blat blast gacuuaacaugugccgaaccu guucggcauauguaagguucg gacuuaacaugugccgaaccuaauaauuagguuauaaccuaauaauuagguucggcauauguaagguucg NW_025323144.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000587_whole_genome_shotgun_sequence:108602..108672:+
NW_025322871.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000220_whole_genome_shotgun_sequence_714103 0.5 28 28 0 0 no blat blast uccgcuagcggauauggacc uccauauccgcuugcggauu uccgcuagcggauauggaccaggggguccauauccgcuugcggauu NW_025322871.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000220_whole_genome_shotgun_sequence:61510..61556:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_157277 0.5 76 76 0 0 no blat blast ucgucacggagaaggcucugggg ccagggccuucuccuugaccauu ccagggccuucuccuugaccauuuugaaaaucgucacggagaaggcucugggg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:4289361..4289414:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_173078 0.5 8 8 0 0 no sfr-miR-13a-5p_MIMAT0041906_Spodoptera_frugiperda_miR-13a-5p blat blast uugucaaagauggcgugaugaaca gucgucgcgaucugaaaaau uugucaaagauggcgugaugaacagugccaugucgucgcgaucugaaaaau NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:24934320..24934371:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_477638 0.5 26 26 0 0 no oan-miR-1346_MIMAT0006919_Ornithorhynchus_anatinus_miR-1346 blat blast guggguuggaaggguaggaacaca gcuuccuguagcaauuauuaacag gcuuccuguagcaauuauuaacagucacuccaaaacagaaaaaaaugacuguggguuggaaggguaggaacaca NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:20281398..20281472:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_210473 0.5 8 8 0 0 no mle-miR-12100-3p_MIMAT0048840_Melibe_leonina_miR-12100-3p blat blast cuuugcgcaagggaagugaauc cucacauuccuucccaccagcc cucacauuccuucccaccagccaacgggauguacauuuuuuuucuugauuaccuucccgcgcuuugcgcaagggaagugaauc NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:14215817..14215900:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_61956 0.5 21 21 0 0 no blat blast uccgcuagcggauauggacc uccauacccgcuagcggaug uccgcuagcggauauggacccccugguccauacccgcuagcggaug NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:32404207..32404253:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_276171 0.5 44 39 5 0 no blat blast uucgcgcuuguuggauaugagacug aucucauacccagcgcgcgcucaug uucgcgcuuguuggauaugagacugguuauagucaacgcggcgcuacgcgccucguuggcuauuuaccaucucauacccagcgcgcgcucaug NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:17411698..17411791:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_13719 0.4 5 3 0 2 no ath-miR405a_MIMAT0001006_Arabidopsis_thaliana_miR405a blat blast uugaguugaacaugagaagauaa aguggucaacuugauaucuca aguggucaacuugauaucucauuagugagcgcagcgaacgaguuagauauugaguugaacaugagaagauaa NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:16681587..16681659:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_99465 0.4 1766 1766 0 0 no cin-miR-4030-3p_MIMAT0016550_Ciona_intestinalis_miR-4030-3p blat blast ugcuaucagaauuuugcgaauggau ugaucgcaaagguaugguacaaa ugcuaucagaauuuugcgaauggauggaugcaggaagucuucguuaagaacuuuggcgagaaucgucucuugaucgcaaagguaugguacaaa NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5560854..5560947:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_407107 0.4 234 234 0 0 no blat blast uaugaggugauaguugauucggc cucaucaacuaucaccucauaga uaugaggugauaguugauucggccuucggccucaucaacuaucaccucauaga NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:16392550..16392603:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_69043 0.4 6 2 4 0 no gra-miR8718_MIMAT0034261_Gossypium_raimondii_miR8718 blat blast uuuuuggacaauuuuucagc ugaaagauuguccuaaaagu ugaaagauuguccuaaaaguuuaacauuuacccucgaagcuucgcuucucggccaacuguucauuuuuuggacaauuuuucagc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:2991740..2991824:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_200970 0.4 19 18 0 1 no blat blast ucggcagauaacacagaccucgg agucuguguuaucugccuu agucuguguuaucugccuuagccuucggcuucggcagauaacacagaccucgg NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:1752623..1752676:+
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_492148 0.4 3 2 0 1 no blat blast guauacugggugcuggccuc ggugugcaugcguuauaugagu guauacugggugcuggccuccugguuggaacggcucuggccguaauaaucccagaaggugugcaugcguuauaugagu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:16528507..16528585:+
NW_025322649.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000138_whole_genome_shotgun_sequence_624274 0.4 4 4 0 0 no ppc-miR-8299-3p_MIMAT0033116_Pristionchus_pacificus_miR-8299-3p blat blast ugcacauacgcccagcaguugu aacugcuggguguaugugcaau ugcacauacgcccagcaguuguuuuaacaacugcuggguguaugugcaau NW_025322649.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000138_whole_genome_shotgun_sequence:662806..662856:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_39818 0.4 1245 1235 0 10 no blat blast uuccagugacagagugagaucu ucacucugucacuggaaaugu ucacucugucacuggaaaugucacauuuccagugacagagugagaucu NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:8708733..8708781:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_475733 0.4 109 48 61 0 no cin-miR-4194-5p_MIMAT0016812_Ciona_intestinalis_miR-4194-5p blat blast ugacguaauuuggaggacu cccugcagcauuuccaucgcc ugacguaauuuggaggacuggguagaaaaauuuuaacgccguaucccacaaccgcgcgcggccuuagguguuguuuccaaacucccugcagcauuuccaucgcc NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17869658..17869762:-
NW_025323102.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000528_whole_genome_shotgun_sequence_726350 0.4 231 231 0 0 no blat blast uaugaggugauaguugauucggc caaaucaacuaucaccucauaga uaugaggugauaguugauucggccgaaggccaaaucaacuaucaccucauaga NW_025323102.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000528_whole_genome_shotgun_sequence:304676..304729:+
NW_025323102.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000528_whole_genome_shotgun_sequence_726734 0.4 231 231 0 0 no blat blast uaugaggugauaguugauucggc caaaucaacuaucaccucauaga uaugaggugauaguugauucggccgaaggccaaaucaacuaucaccucauaga NW_025323102.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000528_whole_genome_shotgun_sequence:658765..658818:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_458099 0.4 2 1 0 1 no chi-miR-2284e_MIMAT0036096_Capra_hircus_miR-2284e blat blast gaaacuuguugacgcagcacucg aaacgcugccggucuucc aaacgcugccggucuuccacaagcucugcugaaaaacucggagaaacuuguugacgcagcacucg NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:19638767..19638832:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_151858 0.4 6 6 0 0 no ptc-miR6454_MIMAT0025264_Populus_trichocarpa_miR6454 blat blast uuuguaacagccugauga gccaggguguuaccaguu gccaggguguuaccaguugaaaauuugcacaauuuguaacagccugauga NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:16764545..16764595:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_403945 0.4 7 7 0 0 no hsa-miR-1246_MIMAT0005898_Homo_sapiens_miR-1246 blat blast uauggauuuuaauacagcuguugu agagcuguauuaaauccauauc uauggauuuuaauacagcuguugugaaacagagcuguauuaaauccauauc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:11631481..11631532:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_273296 0.3 24 24 0 0 no atr-miR8556_MIMAT0033827_Amborella_trichopoda_miR8556 blat blast aaaaagacccuuugaagc uuuaagggugucugcgaua uuuaagggugucugcgauaucucaacgguugccauggcaacggaacagugcugcaaaaagacccuuugaagc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:13675406..13675478:-
NW_025322655.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000149_whole_genome_shotgun_sequence_630586 0.3 11 9 2 0 no hsa-miR-6732-3p_MIMAT0027366_Homo_sapiens_miR-6732-3p blat blast uaacccuggagcuucaugug caagaccagugucuuu caagaccagugucuuugcgauuuuggcuacugucacugugguagauuuuuaacccuggagcuucaugug NW_025322655.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000149_whole_genome_shotgun_sequence:226456..226525:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_533713 0.3 959 948 0 11 no bmo-miR-3314_MIMAT0015502_Bombyx_mori_miR-3314 blat blast acgcagcacauucucauauucaguc guaaaccaugcugcaagacu acgcagcacauucucauauucaguccgcgauuuuacggcuggguacguaaaccaugcugcaagacu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:5310573..5310639:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_443415 0.3 3 3 0 0 no gma-miR4342_MIMAT0018230_Glycine_max_miR4342 blat blast gaucgacuggcgaucgacuau agucgaucgccaguugaucga agucgaucgccaguugaucgacagucggccgacuaucgaucgacuggcgaucgacuau NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:3312265..3312323:+
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_440628 0.3 15 15 0 0 no blat blast aagucgacacaacguagaagga uuucuacguugugucgacugcu aagucgacacaacguagaaggaauuuuuuuauuuauuuuuuucuacguugugucgacugcu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:15858695..15858756:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_197888 0.3 1395 1394 0 1 no gma-miR4405b_MIMAT0041662_Glycine_max_miR4405b blat blast uuccgaauuguaaaagcu aguuuguuugauuuuga aguuuguuugauuuugagcauccuguuccgaauuguaaaagcu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:26113620..26113663:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_229860 0.3 29 29 0 0 no bmo-miR-3362_MIMAT0015548_Bombyx_mori_miR-3362 blat blast ggauuugaaaaaucugu auuuuugaaauaaga auuuuugaaauaagauccggauuugaaaaaucugu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:6798778..6798813:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_242309 0.3 56 56 0 0 no nta-miR6146a_MIMAT0024734_Nicotiana_tabacum_miR6146a blat blast uuuguccaugggguuguu cgaccuuuucaaugc cgaccuuuucaaugcccuuuacgacuuucaaggcauguuuguccaugggguuguu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:22007402..22007457:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_177034 0.3 116 116 0 0 no blat blast uaccgcaagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguaccgcaagaaaaggcucugcu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:1082857..1082908:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_121525 0.3 6 6 0 0 no prv-miR-LLT2_MIMAT0025305_Pseudorabies_virus_miR-LLT2 blat blast uucaucccuggaauagauucuu uuguguauuccugggaugaagc uucaucccuggaauagauucuuuucauaacuuuuguguauuccugggaugaagc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:34627374..34627428:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_84731 0.3 246 246 0 0 no ppc-miR-8307-5p_MIMAT0033140_Pristionchus_pacificus_miR-8307-5p blat blast aaugagacuuagugggcuacaaa aaaugcccacuaccuauucauucu aaaugcccacuaccuauucauucuucacaauuuauaacaauuauuauugcaugaaugagacuuagugggcuacaaa NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:25810935..25811011:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_177128 0.3 34 34 0 0 no gga-miR-1626-3p_MIMAT0007496_Gallus_gallus_miR-1626-3p blat blast ccuggaagaucgugguguaga uggaccacaguuccuuucagauc uggaccacaguuccuuucagaucugugugagcgauaccuggaagaucgugguguaga NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:1246323..1246380:-
NW_025323136.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000578_whole_genome_shotgun_sequence_743905 0.3 40 36 4 0 no cin-miR-4193-5p_MIMAT0016811_Ciona_intestinalis_miR-4193-5p blat blast uuguuuaaccaguuggaca ucgcaaauuuaagcuuac uuguuuaaccaguuggacaucaugguaucaguucucagaagugcuucugaugaugucgcaaauuuaagcuuac NW_025323136.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000578_whole_genome_shotgun_sequence:69862..69935:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_94665 0.3 13 13 0 0 no blat blast ucgggaaauuauuugauuuugg aaagucaauuaauuucccucgc aaagucaauuaauuucccucgccuuaagguucgggaaauuauuugauuuugg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:36619289..36619341:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_157261 0.3 76 76 0 0 no blat blast ucgucacggagaaggcucugggg ccagggcuuucucuucgaccauu ccagggcuuucucuucgaccauuuugaaaaucgucacggagaaggcucugggg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:4239526..4239579:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_153072 0.3 5 2 0 3 no oan-miR-1341_MIMAT0006872_Ornithorhynchus_anatinus_miR-1341 blat blast uugcgugaccucccgaaagacu acuuucaggaugucacgc acuuucaggaugucacgcaacgcucacccgaaaggagcagggagaguugcgugaccucccgaaagacu NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:18674665..18674733:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_266957 0.3 24 24 0 0 no cin-miR-4030-3p_MIMAT0016550_Ciona_intestinalis_miR-4030-3p blat blast ugcuaucagaauuuugcuaaugaau ccaucagucuguucguagagggcucc ugcuaucagaauuuugcuaaugaauggguuccaaaggggggaccccguagccacgccaucagucuguucguagagggcucc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:5299820..5299901:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_232669 0.3 5 5 0 0 no bmo-miR-3374-5p_MIMAT0015563_Bombyx_mori_miR-3374-5p blat blast agaagaugacggcuaagauga aucuuagucgucauguucuug agaagaugacggcuaagaugaagaugaucgucaucuuagucgucauguucuug NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:10879351..10879404:-
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_555533 0.3 2 1 0 1 no blat blast cucgcucguuuuccugcaaacu ucugcaacgcaacgcgcgagaca ucugcaacgcaacgcgcgagacacgugagucucgcucguuuuccugcaaacu NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:2117958..2118010:-
NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence_605594 0.3 196 196 0 0 no dme-miR-219-3p_MIMAT0020803_Drosophila_melanogaster_miR-219-3p blat blast uggguugcuuugaauauccaugu uccgaugaacgaagcugcuuuau uccgaugaacgaagcugcuuuauuugaugguuuuccagccuuucaggcccuggguugcuuugaauauccaugu NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence:606221..606294:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_69600 0.2 5 5 0 0 no tca-miR-3855-5p_MIMAT0018766_Tribolium_castaneum_miR-3855-5p blat blast aucgucaggaaauaagcuua aucuuauuuccuaacgauac aucgucaggaaauaagcuuaauuauuaaucuuauuuccuaacgauac NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:3933551..3933598:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_73358 0.2 231 231 0 0 no blat blast uaugaggugauaguugauucggc cucaucaacuaucaccucauaga uaugaggugauaguugauucggccaucggccucaucaacuaucaccucauaga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:10089829..10089882:+
NW_025322770.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000077_whole_genome_shotgun_sequence_679732 0.2 355 353 0 2 no blat blast uacucgcccgauuacucccugaau uaaucaggcucguaauuucaa uaaucaggcucguaauuucaaaucauuucugaaauuacucgcccgauuacucccugaau NW_025322770.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000077_whole_genome_shotgun_sequence:13511..13570:+
NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence_604536 0.2 47 47 0 0 no mmu-miR-7044-5p_MIMAT0027992_Mus_musculus_miR-7044-5p blat blast cuguggugauuacuuauu agagaaucagcuucaauc cuguggugauuacuuauugguuuguuacauacacagauaacagagaaucagcuucaauc NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence:31350..31409:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_477468 0.2 2 1 0 1 no bma-miR-9514_MIMAT0037507_Brugia_malayi_miR-9514 blat blast gaaaaagaaaggcugaaua gguagcauucugaucaaaau gaaaaagaaaggcugaauaaauauuauaugguagcauucugaucaaaau NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:19948614..19948663:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_225639 0.2 27 27 0 0 no blat blast ucaugggccauugacucagagcu cucugaguuaauagcccagucag cucugaguuaauagcccagucagccuugggacucaugggccauugacucagagcu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:342403..342458:-
NW_025322676.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000184_whole_genome_shotgun_sequence_647036 0.2 29 29 0 0 no blat blast ucaugggcuauugauucagagcu cucugcgacaauagcccauucgg cucugcgacaauagcccauucggccuuuggucucaugggcuauugauucagagcu NW_025322676.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000184_whole_genome_shotgun_sequence:321820..321875:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_351650 0.2 8 3 5 0 no gga-miR-1737_MIMAT0007640_Gallus_gallus_miR-1737 blat blast uagcacuguuaguugccgaguu cuugugaugaugucacaguguggac uagcacuguuaguugccgaguuaaucaagauuuugauuuaugcaaauuugaugacuugugaugaugucacaguguggac NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:8161588..8161667:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_137672 0.2 761 761 0 0 no blat blast ucuagacuguauuuucaacacu uguugaaaauacagucuaguaa ucuagacuguauuuucaacacugcuaugcaguguugaaaauacagucuaguaa NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:18975995..18976048:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_92488 0.2 101 101 0 0 no blat blast ugacgaagggcuaacgcucg agcgucagcccuucgucaga agcgucagcccuucgucagagcgaaugacgaagggcuaacgcucg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:33787480..33787525:+
NW_025322644.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000127_whole_genome_shotgun_sequence_618960 0.2 2 1 0 1 no oni-miR-10695_MIMAT0043196_Oreochromis_niloticus_miR-10695 blat blast aaugugauggugugaagacg ucucuaaaucgcgcgugcuua aaugugauggugugaagacggguuauaagggaaaacaggucacuuccgcuugccguccgcgucucuaaaucgcgcgugcuua NW_025322644.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000127_whole_genome_shotgun_sequence:367627..367709:-
NW_025322864.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000213_whole_genome_shotgun_sequence_712991 0.2 6 5 1 0 no hpo-miR-10148-5p_MIMAT0040878_Heligmosomoides_polygyrus_miR-10148-5p blat blast acugcgucccugguaucucucuguu cuuugagcuagccuugguaacccugugc acugcgucccugguaucucucuguuuguuuuggcagcugugccugugcaugcuuugagcuagccuugguaacccugugc NW_025322864.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000213_whole_genome_shotgun_sequence:118857..118936:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_475648 0.2 111 111 0 0 no blat blast uaccgugagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguaccgugagaaaaggcucugcu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:17736572..17736623:-
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_70622 0.2 19 19 0 0 no esi-miR3462-3p_MIMAT0017778_Ectocarpus_siliculosus_miR3462-3p blat blast uuucgggacuuucgagaaacg ugucuuuucgggcccgaaacg ugucuuuucgggcccgaaacguuuucgggacuuucgagaaacg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:5284470..5284513:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_65594 0.2 10 10 0 0 no cpa-miR477_MIMAT0031828_Carica_papaya_miR477 blat blast auuggaggacagacgcac gcguguguguaacuauacaauga gcguguguguaacuauacaaugagcuaaauucuacgcguauuuugauuugccgccaucugugauuuauuggaggacagacgcac NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:36738065..36738149:-
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_284750 0.2 77 76 0 1 no blat blast gugucucgaaaacucagacc ugaguuuucgugacacccgu ugaguuuucgugacacccguuugggugucucgaaaacucagacc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:9060900..9060944:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_8270 0.2 6 5 1 0 no hpo-miR-10148-5p_MIMAT0040878_Heligmosomoides_polygyrus_miR-10148-5p blat blast acugcgucccugguaucucucuguu cuuugagcuagccuugguaacccugugc acugcgucccugguaucucucuguuuguuuuggcagcugugccugugcaugcuuugagcuagccuugguaacccugugc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:9068991..9069070:+
NW_025322778.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000102_whole_genome_shotgun_sequence_686826 0.2 2 1 0 1 no hhi-miR-723_MIMAT0030335_Hippoglossus_hippoglossus_miR-723 blat blast caaucugugaccaaagaacaagacu guuuacaucuuuuccgcu guuuacaucuuuuccgcuugucuauacaaucugugaccaaagaacaagacu NW_025322778.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000102_whole_genome_shotgun_sequence:344814..344865:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_158333 0.2 6 6 0 0 no ipu-miR-7577_MIMAT0029576_Ictalurus_punctatus_miR-7577 blat blast cucggacauguugcaauuu uuugcagccgguuuagau uuugcagccgguuuagauuuugcugaagacuuaucuggcacugucucggacauguugcaauuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:5972806..5972869:+
NW_025322655.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000149_whole_genome_shotgun_sequence_629994 0.2 6 5 1 0 no hpo-miR-10148-5p_MIMAT0040878_Heligmosomoides_polygyrus_miR-10148-5p blat blast acugcgucccugguaucucucuguu cuuugagcuagccuugguaacccugugc acugcgucccugguaucucucuguuuguuuuggcagcugugccugugcaugcuuugagcuagccuugguaacccugugc NW_025322655.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000149_whole_genome_shotgun_sequence:148901..148980:+
NW_025323320.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000791_whole_genome_shotgun_sequence_762801 0.2 9 3 6 0 no esi-miR3458-3p_MIMAT0017794_Ectocarpus_siliculosus_miR3458-3p blat blast cgcguccagagguacugcug gcgaucacugggccgaa gcgaucacugggccgaaaucucggggaacaucguucgguacgacgcucuggcaccgcguccagagguacugcug NW_025323320.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000791_whole_genome_shotgun_sequence:2127..2201:-
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_527137 0.2 6 6 0 0 no cin-miR-4077a-5p_MIMAT0016642_Ciona_intestinalis_miR-4077a-5p blat blast caguuggagcugccggua acgugcgagucuacuuuc acgugcgagucuacuuucaagucuuugauaccaagggcuacaguuggagcugccggua NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:13832762..13832820:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_75261 0.2 2 1 0 1 no blat blast uucucagacuccaaucaccg gaugauuggaguccugagaag gaugauuggaguccugagaaggacaucaagacuucucagacuccaaucaccg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:12857516..12857568:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_280744 0.2 6 5 1 0 no hpo-miR-10148-5p_MIMAT0040878_Heligmosomoides_polygyrus_miR-10148-5p blat blast acugcgucccugguaucucucuguu cuuugagcuagccuugguaacccugugc acugcgucccugguaucucucuguuuguuuuggcagcugugccugugcaugcuuugagcuagccuugguaacccugugc NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:3363761..3363840:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_268383 0.2 5 3 0 2 no osa-miR1863c_MIMAT0013830_Oryza_sativa_miR1863c blat blast gagaaacuggaaacaaugcuuaug caucguuuuugcuuucucuuggga caucguuuuugcuuucucuugggaccauuguaaguucuaagagaaacuggaaacaaugcuuaug NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:6759105..6759169:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_266806 0.2 111 111 0 0 no blat blast uaccgugagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguaccgugagaaaaggcucugcu NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:5089655..5089706:-
NW_025322685.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000197_whole_genome_shotgun_sequence_651329 0.2 47 47 0 0 no mmu-miR-7044-5p_MIMAT0027992_Mus_musculus_miR-7044-5p blat blast cuguggugauuacuuauu agagaaucagcuucaauc cuguggugauuacuuauugguuuguuacauucacagauaacagagaaucagcuucaauc NW_025322685.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000197_whole_genome_shotgun_sequence:229308..229367:+
NW_025322811.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000152_whole_genome_shotgun_sequence_701004 0.2 189 189 0 0 no aly-miR822-5p_MIMAT0017599_Arabidopsis_lyrata_miR822-5p blat blast uuguaacgccauacgcauucuuugc cuugaacacugcuuguagcgguucaugg uuguaacgccauacgcauucuuugcagucucuuaggugacugauguauugccuucuugaacacugcuuguagcgguucaugg NW_025322811.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000152_whole_genome_shotgun_sequence:163508..163590:+
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_443230 0.2 79 79 0 0 no blat blast ccuaagccguguagugcacugu aguguaaugcacggcugaggcu ccuaagccguguagugcacuguguuaugcaguguaaugcacggcugaggcu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:3069269..3069320:+
NW_025322867.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000216_whole_genome_shotgun_sequence_713377 0.2 2 1 0 1 no blat blast uuugaaucaauggcccauucggc cuaaugugccauugacucagagc uuugaaucaauggcccauucggccuccagccuaaugugccauugacucagagc NW_025322867.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000216_whole_genome_shotgun_sequence:52656..52709:+
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_366456 0.2 54 54 0 0 no hsv2-miR-H23-3p_MIMAT0014706_Herpes_Simplex_miR-H23-3p blat blast ucgagcuugggcauaggg cuaagaacagaagaua cuaagaacagaagauauuuguuuagaaaucucaagcgauuguaaauauugccuuggguuaaaaguagaagcaacugucgagcuugggcauaggg NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:5779588..5779682:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_175233 0.1 4774 4774 0 0 no aga-miR-2b-5p_MIMAT0041564_Anopheles_gambiae_miR-2b-5p blat blast ucucaaaguuggauguguc uaaucagauaauuuugaaaag uaaucagauaauuuugaaaaguucucaaaguuggauguguc NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:27513938..27513979:+
NW_025322875.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000224_whole_genome_shotgun_sequence_714676 0.1 6 3 0 3 no blat blast uaaacaaaucggacucccgcu uagggaucguccgauuuugugaacca uaaacaaaucggacucccgcuuagggaucguccgauuuugugaacca NW_025322875.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000224_whole_genome_shotgun_sequence:8096..8143:-
NW_025322638.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000115_whole_genome_shotgun_sequence_609988 0.1 6 6 0 0 no cel-miR-1818_MIMAT0006585_Caenorhabditis_elegans_miR-1818 blat blast cguggucugcagucucuugu aagccacuuaguagaaccaauggu aagccacuuaguagaaccaauggugaaagcaagcugcuaccguggucugcagucucuugu NW_025322638.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000115_whole_genome_shotgun_sequence:523697..523757:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_31453 0.1 4 4 0 0 no str-miR-8377-3p_MIMAT0033401_Strongyloides_ratti_miR-8377-3p blat blast uucauugugugguugucuucagc ugaggacaaccacacaaugaaau ugaggacaaccacacaaugaaauauuauuucauugugugguugucuucagc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:36585333..36585384:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_81340 0.1 2 1 0 1 no cpo-miR-12075-5p_MIMAT0047451_Cavia_porcellus_miR-12075-5p blat blast uaacuccagcuguacagaagca auuucagagcuggaaauauuauuuc uaacuccagcuguacagaagcagauuauuucagagcuggaaauauuauuuc NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:21164600..21164651:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_268468 0.1 41 41 0 0 no blat blast uugacucugaagauggcuuc agccaucuucagagucaagu agccaucuucagagucaagucuuaagucuauauguuuugacucugaagauggcuuc NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:7029477..7029533:-
NW_025322675.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000183_whole_genome_shotgun_sequence_646385 0.1 3 3 0 0 no dme-miR-4915-5p_MIMAT0020508_Drosophila_melanogaster_miR-4915-5p blat blast uugagaaauuagcugcgaa cgcagcuaauuucucaauu cgcagcuaauuucucaauugauugagaaaauuaauugagaaauuagcugcgaa NW_025322675.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000183_whole_genome_shotgun_sequence:307682..307735:+
NW_025322836.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000183_whole_genome_shotgun_sequence_707107 0.1 4 2 2 0 no dsi-miR-982c-5p_MIMAT0037359_Drosophila_simulans_miR-982c-5p blat blast ccuuggacgggaaaggguua acccuuugccguccaagggg ccuuggacgggaaaggguuaauuaggacguaguuuuugacguuguuaauugggacauagucuuugacguuguuaacccuuugccguccaagggg NW_025322836.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000183_whole_genome_shotgun_sequence:117212..117306:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_171112 0.1 8 8 0 0 no osa-miR11338-5p_MIMAT0044630_Oryza_sativa_miR11338-5p blat blast auugugaggacugaggcuugga cagguagaaguuuuaaggguac auugugaggacugaggcuuggaagauugagugguaacaggaguuagccucugaaauacggcggauacaccagguagaaguuuuaaggguac NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:22769551..22769642:+
NW_025322653.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000146_whole_genome_shotgun_sequence_628246 0.1 450 450 0 0 no mtr-miR2630a_MIMAT0013370_Medicago_truncatula_miR2630a blat blast agguuuugguuuggcugcacuugaa caggaguuuugucaagcugaccuug caggaguuuugucaagcugaccuuguaaugaugcccucaagaacugaagguuuugguuuggcugcacuugaa NW_025322653.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000146_whole_genome_shotgun_sequence:523229..523301:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_427704 0.1 25 24 1 0 no blat blast uaauucuaccgaucuguuga gacagugagguagaauuuaa gacagugagguagaauuuaaaauugaacgacacuuaccuggaaguggaaguucgaugauaauucuaccgaucuguuga NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:1223469..1223547:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_506340 0.1 53 53 0 0 no blat blast uccuaagaaacgacugugugaga ccaugcagucguuuuuagguga ccaugcagucguuuuuaggugaaauacgagucuccuaagaaacgacugugugaga NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:12726363..12726418:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_492064 0.1 21 21 0 0 no ath-miR858a_MIMAT0004302_Arabidopsis_thaliana_miR858a blat blast cuucguugggcaaaaugacgagu ugucguuuugucggauaaaaaa cuucguugggcaaaaugacgaguagaucugaauaggaaccaaagugccacugucguuuugucggauaaaaaa NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:16410731..16410803:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_102453 0.1 231 231 0 0 no blat blast uaugaggugauaguugauucggc cucaucaacuaucaccucauaga uaugaggugauaguugauucggccaucggccucaucaacuaucaccucauaga NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:10038339..10038392:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_207425 0.1 4 4 0 0 no cel-miR-8192-5p_MIMAT0032797_Caenorhabditis_elegans_miR-8192-5p blat blast uggucgaggagaaggcccuggg cagagccuucucugggacgauu cagagccuucucugggacgauuuucaaaauggucgaggagaaggcccuggg NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:10494645..10494696:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_42588 0.1 12 12 0 0 no gga-miR-6543-5p_MIMAT0025826_Gallus_gallus_miR-6543-5p blat blast acuguuaccacugagcaaauc uuuucagaaacgguuggaggcu uuuucagaaacgguuggaggcucgacuugaaggucacaaggagggaacuguuaccacugagcaaauc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:12154099..12154166:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_179076 0.1 4 4 0 0 no cel-miR-8192-5p_MIMAT0032797_Caenorhabditis_elegans_miR-8192-5p blat blast uggucgaggagaaggcccuggg cagagccuucucugggacgauu cagagccuucucugggacgauuuucaaaauggucgaggagaaggcccuggg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:4308863..4308914:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_363818 0.1 86 86 0 0 no cel-miR-86-3p_MIMAT0020776_Caenorhabditis_elegans_miR-86-3p blat blast gugggcucggauucuauuguuac aaccuuggucucuggggacauuu aaccuuggucucuggggacauuucaagaauugugaaauaucgauuggaucaaaaucgguaguguucauugugggcucggauucuauuguuac NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:1721367..1721459:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_32990 0.1 20 20 0 0 no blat blast ugcgaugccggugcagugcu cacugcagcgcuaacgcaga ugcgaugccggugcagugcuccaccaacugagcuaugagcacugcagcgcuaacgcaga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:38615627..38615686:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_106492 0.1 111 111 0 0 no blat blast uaccgugagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguaccgugagaaaaggcucugcu NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:15118123..15118174:-
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_342201 0.1 42 42 0 0 no blat blast ucaccucguugacauucucaugg acgaguuuguuaacgagguucaa ucaccucguugacauucucauggcuuccccacgaguuuguuaacgagguucaa NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:12486936..12486989:-
NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence_574526 0.1 12 12 0 0 no esi-miR3465-3p_MIMAT0017792_Ectocarpus_siliculosus_miR3465-3p blat blast gccugguacaucugaaagcu cucuugaagauuuaucugcaa gccugguacaucugaaagcuuuuacaucagagcucuugaagauuuaucugcaa NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence:636995..637048:+
NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence_296467 0.1 3 2 0 1 no blat blast aaugccgagcuugugauugcg aaaucgauguucggcgugu aaugccgagcuugugauugcguauccgguauuggucauagcauuuuccacguaugaaaucgauguucggcgugu NC_058072.1_Acropora_millepora_isolate_JS-1_chromosome_7_Amil_v2.1_whole_genome_shotgun_sequence:20321236..20321310:+
NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence_617067 0.1 15 15 0 0 no mmu-miR-7026-3p_MIMAT0027957_Mus_musculus_miR-7026-3p blat blast ugugcuuucuuucuugcu caagggagaaacauu caagggagaaacauucuacuucuagcauucgcugugaaauucccagggcgguugagugugcuuucuuucuugcu NW_025322643.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000126_whole_genome_shotgun_sequence:388889..388963:+
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_200003 0.1 111 111 0 0 no blat blast uaccgugagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguaccgugagaaaaggcucugcu NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:314254..314305:+
NW_025322875.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000224_whole_genome_shotgun_sequence_714678 0.1 6 3 0 3 no blat blast uaaacaaaucggacucccgcu uagggaucguccgauuuugugaacca uaaacaaaucggacucccgcuuagggaucguccgauuuugugaacca NW_025322875.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000224_whole_genome_shotgun_sequence:9829..9876:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_391956 0.1 21 21 0 0 no ath-miR858a_MIMAT0004302_Arabidopsis_thaliana_miR858a blat blast cuucguugggcaaaaugacgagu ugucguuaugucggauauaagag cuucguugggcaaaaugacgaguagaccugaauagaaaccaaaguaccacugucguuaugucggauauaagag NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:17994565..17994638:+
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_555181 0.1 4 4 0 0 no asu-miR-5362-5p_MIMAT0021586_Ascaris_suum_miR-5362-5p blat blast uaaucucguacccagaucucu agaucuggguucgagauuaac uaaucucguacccagaucucuuguggcgagcgaagccacaagagaucuggguucgagauuaac NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:1629250..1629313:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_379879 0.1 9 9 0 0 no mml-miR-216a-3p_MIMAT0026848_Macaca_mulatta_miR-216a-3p blat blast ccagugguacuguuuugcauuc uugaagaccucacuggcc uugaagaccucacuggccacaccagugguacuguuuugcauuc NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:2361131..2361174:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_65324 0.1 4 4 0 0 no str-miR-8377-3p_MIMAT0033401_Strongyloides_ratti_miR-8377-3p blat blast uucauugugugguugucuucagc ugaggacaaccacacaaugaaau ugaggacaaccacacaaugaaauauuauuucauugugugguugucuucagc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:36521382..36521433:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_226581 0.1 94 94 0 0 no tca-miR-263a-3p_MIMAT0019180_Tribolium_castaneum_miR-263a-3p blat blast uguggacucuugcuauac guggagaaagggaaaacauaau uguggacucuugcuauacuauggaugacuuaaagggguggagaaagggaaaacauaau NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:1816258..1816316:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_51715 0.1 35 35 0 0 no hsa-miR-135a-2-3p_MIMAT0037309_Homo_sapiens_miR-135a-2-3p blat blast auguagggcacucuuccaucguagu agcgacaagaggaacacuccaugcaaag auguagggcacucuuccaucguaguagauccaaggcacagguacuguagcgacaagaggaacacuccaugcaaag NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:23474790..23474865:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_66558 0.1 9 9 0 0 no mse-miR-2565_MIMAT0024495_Manduca_sexta_miR-2565 blat blast cgaaauuugucggauuccuacuuga agauggaaagacaaguugaaac agauggaaagacaaguugaaacgauacgaaauuugucggauuccuacuuga NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:38433503..38433554:-
NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence_204549 0.1 1254 1235 0 19 no blat blast agugacagagugagaucug ucacucugucacuggaacauuucc ucacucugucacuggaacauuuccagugacagagugagaucug NC_058070.1_Acropora_millepora_isolate_JS-1_chromosome_5_Amil_v2.1_whole_genome_shotgun_sequence:6915741..6915784:+
NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence_537302 0.1 6 6 0 0 no bmo-miR-2759_MIMAT0013631_Bombyx_mori_miR-2759 blat blast cgaaagauggcggcucgacu ucgagccgcugaacucucguc ucgagccgcugaacucucgucucguuugagacgaaagauggcggcucgacu NC_058079.1_Acropora_millepora_isolate_JS-1_chromosome_14_Amil_v2.1_whole_genome_shotgun_sequence:9113937..9113988:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_400666 0.1 6 6 0 0 no cel-miR-1818_MIMAT0006585_Caenorhabditis_elegans_miR-1818 blat blast cguggucugcagucucuugu aagccacuuaguagaaccaauggu aagccacuuaguagaaccaauggugaaagcaagcugcuaccguggucugcagucucuugu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:7404330..7404390:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_45023 0 9 9 0 0 no cel-miR-77-3p_MIMAT0000049_Caenorhabditis_elegans_miR-77-3p blat blast aucaucaguauaacucuagcucauu uaggcacagagugacugagugg aucaucaguauaacucuagcucauuaaaucuauaggcacagagugacugagugg NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:15158445..15158499:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_52458 0 6 6 0 0 no mmu-miR-705_MIMAT0003495_Mus_musculus_miR-705 blat blast agugggagaaagaagaca ucucuucuucccuucc ucucuucuucccuuccuuggagugggagaaagaagaca NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:24213555..24213593:-
NW_025323146.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000589_whole_genome_shotgun_sequence_746881 0 9 9 0 0 no gga-miR-6690-5p_MIMAT0025796_Gallus_gallus_miR-6690-5p blat blast ucagaagggacaugcagaacugau cggucaguauguuauuccaacggaac cggucaguauguuauuccaacggaacuccaaaaauuuuugugauguucagaagggacaugcagaacugau NW_025323146.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000589_whole_genome_shotgun_sequence:78869..78939:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_169933 0 12 12 0 0 no blat blast cuaaucggacaggucaaaucgg gauuuggccugugcgauuacaa gauuuggccugugcgauuacaaauguuucuaaucggacaggucaaaucgg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:20704254..20704304:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_275486 0 6 6 0 0 no mtr-miR2586b_MIMAT0021172_Medicago_truncatula_miR2586b blat blast uggugucgggcgcaaagg ucuguguauggucaccgua ucuguguauggucaccguaacagucgcuucauacagcugcauggugucgggcgcaaagg NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:16426132..16426191:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_66883 0 355 354 0 1 no blat blast uacucgcccgauuacucccugaau auucagggaguaaucgugcucg auucagggaguaaucgugcucgugauuucaaauuacucgcccgauuacucccugaau NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:39204864..39204921:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_447432 0 413 412 0 1 no bmo-miR-3401_MIMAT0015605_Bombyx_mori_miR-3401 blat blast uuuacagugauccagguucucaacu aggccuggcaaagaauugauagagagucgu uuuacagugauccagguucucaacuugugggcgaagagagggagcuuaaggaggccuggcaaagaauugauagagagucgu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:8656231..8656312:+
NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence_577946 0 3 2 0 1 no blat blast cguuguaaagcagugcauguu ucugcacugauuuaccuuguu cguuguaaagcagugcauguuguaaaaagaaucugcacugauuuaccuuguu NW_025322622.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000061_whole_genome_shotgun_sequence:299107..299159:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_179974 0 3 3 0 0 no bmo-miR-3210_MIMAT0015389_Bombyx_mori_miR-3210 blat blast ugacuaagaguugaagagcuuu agcucuucaagucuuagucaca agcucuucaagucuuagucacaucugggcaaacauuuaguauuuuaauucuaaauguuugcccagaugugacuaagaguugaagagcuuu NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:5730081..5730171:-
NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence_604358 0 2897 2892 5 0 no blat blast cucggcucgggccuggaagcg cgagggccccggcaaaaguu cgagggccccggcaaaaguugucgucucuuguugacggggucucggcucgggccuggaagcg NW_025322635.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000104_whole_genome_shotgun_sequence:768850..768912:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_344823 0 4 3 0 1 no bmo-miR-3410_MIMAT0015616_Bombyx_mori_miR-3410 blat blast aauaaagagggauaugacuguua aauuugaugucugguuucuuuggggua aauaaagagggauaugacuguuaugaaagguguuauuucaucgauguuuggaaauuugaugucugguuucuuuggggua NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:15871247..15871326:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_479612 0 6 6 0 0 no gma-miR156g_MIMAT0018339_Glycine_max_miR156g blat blast ucagaagacuaaaaguaaaauaauu uuaguuuacuuuuagucuuccgaac uuaguuuacuuuuagucuuccgaacuuuaaguucagaagacuaaaaguaaaauaauu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:22962896..22962953:-
NW_025322629.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000089_whole_genome_shotgun_sequence_595207 0 198 198 0 0 no sly-miR9471b-3p_MIMAT0035442_Solanum_lycopersicum_miR9471b-3p blat blast uuggcugaagguguuugggu ccaacacccugccaauu uuggcugaagguguuuggguagauugaagagacgaccccuuucuuggccaauuuuguaugaagauucucuccaacacccugccaauu NW_025322629.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000089_whole_genome_shotgun_sequence:489928..490015:-
NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence_474778 0 7206 7206 0 0 no hpo-miR-10048-5p_MIMAT0040620_Heligmosomoides_polygyrus_miR-10048-5p blat blast ccaggaugaugacguuuuu aaacaguuggauuauguugauu aaacaguuggauuauguugauuccauucagaagccaggaugaugacguuuuu NC_058077.1_Acropora_millepora_isolate_JS-1_chromosome_12_Amil_v2.1_whole_genome_shotgun_sequence:16820593..16820645:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_485838 0 416 412 3 1 no bmo-miR-3401_MIMAT0015605_Bombyx_mori_miR-3401 blat blast uuuacagugauccagguucucaacu aggccuggcaaagaauugauagagagucgu uuuacagugauccagguucucaacuugugggcgcagagagggagcuuaaggaggccuggcaaagaauugauagagagucgu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:8726146..8726227:+
NW_025322665.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000166_whole_genome_shotgun_sequence_640673 0 10 10 0 0 no dya-miR-303_MIMAT0039174_Drosophila_yakuba_miR-303 blat blast uuagaauuuagucagaauaaucca uuuuguucuaauacuaaaucaucuaaga uuagaauuuagucagaauaauccaagauccgagagagagcaucacuucucuuggcuauuuuguucuaauacuaaaucaucuaaga NW_025322665.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000166_whole_genome_shotgun_sequence:146212..146297:-
NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence_583608 0 6 6 0 0 no hbr-miR6484_MIMAT0025293_Hevea_brasiliensis_miR6484 blat blast caaugggcucgaggaucuuuguga acauauccaggcagccacaaugcu caaugggcucgaggaucuuugugaguuaaaaauugaucaagucacauauccaggcagccacaaugcu NW_025322624.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000070_whole_genome_shotgun_sequence:281259..281326:+
NW_025322897.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000247_whole_genome_shotgun_sequence_718210 0 4 3 1 0 no mtr-miR2611_MIMAT0013320_Medicago_truncatula_miR2611 blat blast gauuugucugugucucgca cacgccacugaaaaucac gauuugucugugucucgcagaucaguuauuugccucagucuucggccucggcaaauaauugaucugcacgccacugaaaaucac NW_025322897.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000247_whole_genome_shotgun_sequence:44994..45078:+
NW_025323187.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000635_whole_genome_shotgun_sequence_754128 0 14 14 0 0 no gma-miR4349-5p_MIMAT0018238_Glycine_max_miR4349-5p blat blast gauuggcucugaggccug cguucaaaguuauagau cguucaaaguuauagauugggauuggcucugaggccug NW_025323187.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000635_whole_genome_shotgun_sequence:71914..71952:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_160526 0 3 3 0 0 no hsa-miR-3115_MIMAT0014977_Homo_sapiens_miR-3115 blat blast uuaugggugagcucaauuagga cuaauugagcucacccauaaac uuaugggugagcucaauuaggagaaauucuccuaauugagcucacccauaaac NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:8693943..8693996:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_332394 0 4 4 0 0 no zma-miR171g-5p_MIMAT0015202_Zea_mays_miR171g-5p blat blast uauugacucagaggccaug gggcccugaaucaauagc gggcccugaaucaauagcccaugaggccuaaggucuuaugggcuauugacucagaggccaug NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:16498944..16499006:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_69921 0 11 10 1 0 no blat blast uugguaggcugauuugcaca ugcgaaugagccuaccaagc ugcgaaugagccuaccaagccucacugucaugugcuauauugaaaagaauucuugcucuaaagugaggcuugguaggcugauuugcaca NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:4499815..4499904:+
NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence_344502 0 2 1 0 1 no pxy-miR-8486_MIMAT0033693_Plutella_xylostella_miR-8486 blat blast caaugauagccucggucuucuaau agaagccgcgcugugucuugac caaugauagccucggucuucuaauguucguaaaagcacaacuucgagaagccgcgcugugucuugac NC_058073.1_Acropora_millepora_isolate_JS-1_chromosome_8_Amil_v2.1_whole_genome_shotgun_sequence:15475876..15475943:-
NW_025322675.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000183_whole_genome_shotgun_sequence_646676 0 3 3 0 0 no dme-miR-4915-5p_MIMAT0020508_Drosophila_melanogaster_miR-4915-5p blat blast uugagaaauuagcugcgaa cgcagcuaauuucucaauu cgcagcuaauuucucaauuaauuuucucaaucaauugagaaauuagcugcgaa NW_025322675.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000183_whole_genome_shotgun_sequence:307680..307733:-
NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence_374842 0 99 99 0 0 no blat blast uacuguaagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguacuguaagaaaaggcucugcu NC_058074.1_Acropora_millepora_isolate_JS-1_chromosome_9_Amil_v2.1_whole_genome_shotgun_sequence:16870193..16870244:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_418765 0 96 96 0 0 no blat blast uacuguaagaaaaggcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaagcauauguacuguaagaaaaggcucugcu NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:8509405..8509456:+
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_50395 0 26 26 0 0 no hsa-miR-4520-3p_MIMAT0019057_Homo_sapiens_miR-4520-3p blat blast uuggacaggauagcauuug ggugggaaggguccuguucaauc uuggacaggauagcauuugaggugggaaggguccuguucaauc NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:21916808..21916851:-
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_179048 0 4 4 0 0 no cel-miR-8192-5p_MIMAT0032797_Caenorhabditis_elegans_miR-8192-5p blat blast uggucgaggagaaggcccuggg caaagccuucuccgugacgauu caaagccuucuccgugacgauuuucgaaauggucgaggagaaggcccuggg NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:4215347..4215398:-
NW_025322628.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000086_whole_genome_shotgun_sequence_593057 0 7 7 0 0 no pxy-miR-8514-5p_MIMAT0033746_Plutella_xylostella_miR-8514-5p blat blast ccgagaaggacuguuguu caacauaccuucauuggaa caacauaccuucauuggaaaugauaaucugggugacugcaguuccgagaaggacuguuguu NW_025322628.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000086_whole_genome_shotgun_sequence:986186..986247:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_155208 0 3 2 1 0 no mtr-miR5240_MIMAT0021234_Medicago_truncatula_miR5240 blat blast uugaaaaaucaaagugaaccu guucacuuugauuuuucaaau uugaaaaaucaaagugaaccuauggcccucuaggacaauaauuauuguccuagugggccauagguucacuuugauuuuucaaau NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:2208940..2209024:+
NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence_182481 0 3 3 0 0 no hsa-miR-3115_MIMAT0014977_Homo_sapiens_miR-3115 blat blast uuaugggugagcucaauuagga cuaauugagcucacccauaaac uuaugggugagcucaauuaggagaauuucuccuaauugagcucacccauaaac NC_058069.1_Acropora_millepora_isolate_JS-1_chromosome_4_Amil_v2.1_whole_genome_shotgun_sequence:8693941..8693994:-
NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence_418988 0 37 37 0 0 no cin-miR-281-5p_MIMAT0015265_Ciona_intestinalis_miR-281-5p blat blast aggagagugaacuggaucacu uguuguuccaguuuugaggccguua aggagagugaacuggaucacuuucacgcaaaugaaaguuguuuugguguuguguuguuccaguuuugaggccguua NC_058076.1_Acropora_millepora_isolate_JS-1_chromosome_11_Amil_v2.1_whole_genome_shotgun_sequence:9007398..9007474:+
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_388277 0 29 23 0 6 no blat blast cuaaucggacaggucaaaucgg ucgauuuggccuguccgacuaca ucgauuuggccuguccgacuacaaauguuucuaaucggacaggucaaaucgg NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:12074155..12074207:+
NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence_134983 0 2 1 0 1 no dme-miR-2b-1-5p_MIMAT0020782_Drosophila_melanogaster_miR-2b-1-5p blat blast cucuucaacuggacggcaugcgauu auugcauaugaucgagggau cucuucaacuggacggcaugcgauuagaugauuucgcugaauugcauaugaucgagggau NC_058068.1_Acropora_millepora_isolate_JS-1_chromosome_3_Amil_v2.1_whole_genome_shotgun_sequence:14945587..14945647:+
NW_025322828.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000173_whole_genome_shotgun_sequence_705227 0 24 24 0 0 no blat blast aacuuaacaugugccgaacca gugcggcaacguuguuaaguuug gugcggcaacguuguuaaguuugacaaggugucgaacuuaacaugugccgaacca NW_025322828.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xfSc0000173_whole_genome_shotgun_sequence:13350..13405:+
NW_025322615.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000015_whole_genome_shotgun_sequence_551683 0 242 234 0 8 no blat blast aucgcuucucggccuuuuggcua cagaaggccgaaacagugcu cagaaggccgaaacagugcucugaucgcuucucggccuuuuggcua NW_025322615.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000015_whole_genome_shotgun_sequence:2261056..2261102:-
NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence_27298 0 4 4 0 0 no pab-miR3708_MIMAT0018140_Picea_abies_miR3708 blat blast ucacacaaucuuucauccccaaug uuggggaagaaagauugugagaug ucacacaaucuuucauccccaaugaacguuggggaagaaagauugugagaug NC_058066.1_Acropora_millepora_isolate_JS-1_chromosome_1_Amil_v2.1_whole_genome_shotgun_sequence:30726981..30727033:+
NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence_553844 0 84 57 0 27 no blat blast uaaucgugcucguaauuuca ugaaauuacucgcccgauuacu uaaucgugcucguaauuucaaaucggccucgugcuucgcgcucagccgauuuugaaauuacucgcccgauuacu NW_025322616.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000028_whole_genome_shotgun_sequence:117669..117743:-
NW_025322640.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000120_whole_genome_shotgun_sequence_612457 0 3 3 0 0 no cin-miR-133-5p_MIMAT0015259_Ciona_intestinalis_miR-133-5p blat blast uuugguaaccugugcaaaagu uuuuguacagguuaccaaaac uuugguaaccugugcaaaagucaucuugaagaugacuuuuguacagguuaccaaaac NW_025322640.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000120_whole_genome_shotgun_sequence:497622..497679:-
NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence_503368 0 100 100 0 0 no blat blast uaccguaagaaaaagcucugcu cagagccuuuucucgguaca cagagccuuuucucgguacaaaguauauguaccguaagaaaaagcucugcu NC_058078.1_Acropora_millepora_isolate_JS-1_chromosome_13_Amil_v2.1_whole_genome_shotgun_sequence:9401156..9401207:-
NW_025322634.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000102_whole_genome_shotgun_sequence_602274 0 2 1 0 1 no cel-miR-249-3p_MIMAT0000305_Caenorhabditis_elegans_miR-249-3p blat blast ccacaggaaaagauuaacuaca cuguucuuccugagggcu cuguucuuccugagggcuauuuuaagcugcgcuaaaguuucaaugaaaugggggaccacaggaaaagauuaacuaca NW_025322634.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_Sc0000102_whole_genome_shotgun_sequence:710674..710751:-
NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence_384694 0 416 412 3 1 no bmo-miR-3401_MIMAT0015605_Bombyx_mori_miR-3401 blat blast uuuacagugauccagguucucaacu aggccuggcaaagaauugauagagagucgu uuuacagugauccagguucucaacuugugggcgcagagagggagcuuaaggaggccuggcaaagaauugauagagagucgu NC_058075.1_Acropora_millepora_isolate_JS-1_chromosome_10_Amil_v2.1_whole_genome_shotgun_sequence:8240731..8240812:+
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_273908 0 2 1 0 1 no blat blast agcugugggacuucuucauuga ugaagacgaggaccaagcuuucauucacg ugaagacgaggaccaagcuuucauucacgagcugugggacuucuucauuga NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:14734237..14734288:-
NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence_253182 0 5 5 0 0 no aly-miR4223_MIMAT0017911_Arabidopsis_lyrata_miR4223 blat blast auggaauucgaucguccgggugacu ucacccugaagaucaaaucccaucg auggaauucgaucguccgggugacucauuucacccugaagaucaaaucccaucg NC_058071.1_Acropora_millepora_isolate_JS-1_chromosome_6_Amil_v2.1_whole_genome_shotgun_sequence:5229575..5229629:+
NW_025323118.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000555_whole_genome_shotgun_sequence_736805 0 2 2 0 0 no aly-miR3447-5p_MIMAT0017729_Arabidopsis_lyrata_miR3447-5p blat blast cgugacgaaacccuaaggacgu guccuuaggguuuugucacacg guccuuaggguuuugucacacguuuccuuguggaggaggaaacgcgugacgaaacccuaaggacgu NW_025323118.1_Acropora_millepora_isolate_JS-1_unplaced_genomic_scaffold_Amil_v2.1_xpSc0000555_whole_genome_shotgun_sequence:78187..78253:+
NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence_100231 0 28 28 0 0 no blat blast uccgcuagcggauauggacc uccaaauccgcggggg uccgcuagcggauauggaccagggguccaaauccgcggggg NC_058067.1_Acropora_millepora_isolate_JS-1_chromosome_2_Amil_v2.1_whole_genome_shotgun_sequence:6771560..6771601:-