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"GC":[0.668604,0.510199,0.40704,0.43558,0.407359,0.411275,0.338055,0.424459,0.470991,0.349244,0.507912,0.489942,0.4239,0.419619,0.409867,0.420703,0.438181,0.414317,0.433977,0.418711,0.433001,0.416572,0.425601,0.423626,0.420383,0.434266,0.430279,0.415234,0.441499,0.412372,0.42943,0.419182,0.430862,0.416271,0.438054,0.414306,0.418669,0.433631,0.434071,0.412821,0.427074,0.426023,0.424569,0.422713,0.419794,0.429499,0.431443,0.426229,0.434348,0.428763,0.422283,0.412903,0.437035,0.429104,0.433133,0.434346,0.42783,0.428338,0.435099,0.418235,0.434681,0.429087,0.435213,0.433475,0.441754,0.418973,0.439281,0.430976,0.425866,0.41971,0.434373,0.429194,0.435414,0.440028,0.439132,0.434853,0.444594,0.432657,0.439424,0.440289,0.439003,0.435211,0.445367,0.435519,0.442874,0.444223,0.442111,0.439267,0.451241,0.437815,0.446069,0.44574,0.444532,0.442005,0.450665,0.442907,0.446867,0.44789,0.446167,0.442529,0.456312] }, "kmer_count": { "AAAAA":3836067, "AAAAT":2486076, "AAAAC":1741371, "AAAAG":2007985, 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"AGGTT":1225597, "AGGTC":677187, "AGGTG":1505829, "AGGCA":1056589, "AGGCT":886361, "AGGCC":562106, "AGGCG":271409, "AGGGA":2103351, "AGGGT":1813465, "AGGGC":649404, "AGGGG":2085867, "TAAAA":2255784, "TAAAT":1759176, "TAAAC":1104032, "TAAAG":1346428, "TAATA":1474806, "TAATT":1128950, "TAATC":650923, "TAATG":1807536, "TAACA":1481601, "TAACT":825463, "TAACC":503130, "TAACG":313199, "TAAGA":1045010, "TAAGT":788977, "TAAGC":398129, "TAAGG":976727, "TATAA":1415824, "TATAT":2025249, "TATAC":953828, "TATAG":1621684, "TATTA":1308654, "TATTT":1871160, "TATTC":775306, "TATTG":1291541, "TATCA":856969, "TATCT":682447, "TATCC":403429, "TATCG":244120, "TATGA":1150877, "TATGT":1831818, "TATGC":581207, "TATGG":1225394, "TACAA":1175683, "TACAT":1414129, "TACAC":871450, "TACAG":1825526, "TACTA":713795, "TACTT":824859, "TACTC":457601, "TACTG":1333765, "TACCA":730611, "TACCT":626958, "TACCC":298189, "TACCG":199950, "TACGA":234859, "TACGT":290240, "TACGC":128506, "TACGG":260283, "TAGAA":1455443, 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"GC":[0.411688,0.429299,0.418054,0.425046,0.422609,0.424001,0.420438,0.429299,0.414784,0.423902,0.425544,0.421255,0.418885,0.432788,0.416211,0.42055,0.423143,0.422089,0.419994,0.429295,0.417977,0.421939,0.424832,0.424987,0.416526,0.430688,0.417,0.428045,0.426325,0.422849,0.420312,0.43196,0.416531,0.424468,0.425153,0.42392,0.415507,0.430625,0.418955,0.422714,0.424144,0.421437,0.417646,0.428945,0.417881,0.423598,0.423688,0.423942,0.422158,0.43296,0.416769,0.42777,0.427484,0.424458,0.417449,0.431687,0.418147,0.422044,0.426665,0.424982,0.420139,0.430035,0.416667,0.423148,0.424204,0.421456,0.417631,0.428295,0.417452,0.424614,0.425876,0.422488,0.418847,0.431463,0.415629,0.424031,0.424341,0.421666,0.419166,0.428217,0.418447,0.422014,0.422048,0.419918,0.414067,0.428472] }, "kmer_count": { "AAAAA":3051243, "AAAAT":2058123, "AAAAC":1439864, "AAAAG":1552952, "AAATA":2168424, "AAATT":1075551, "AAATC":836496, "AAATG":1801063, "AAACA":2166375, "AAACT":921764, "AAACC":622335, "AAACG":427223, 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"TGGTT":1665622, "TGGTC":768084, "TGGTG":1652951, "TGGCA":869553, "TGGCT":779422, "TGGCC":518395, "TGGCG":269675, "TGGGA":1203588, "TGGGT":1007278, "TGGGC":571092, "TGGGG":1209400, "CAAAA":1596928, "CAAAT":1201023, "CAAAC":905521, "CAAAG":1000784, "CAATA":958123, "CAATT":783540, "CAATC":468490, "CAATG":1033286, "CAACA":1171560, "CAACT":655657, "CAACC":378231, "CAACG":262441, "CAAGA":730146, "CAAGT":573277, "CAAGC":380568, "CAAGG":646717, "CATAA":757488, "CATAT":824451, "CATAC":557746, "CATAG":703901, "CATTA":953064, "CATTT":1377704, "CATTC":630697, "CATTG":998433, "CATCA":898953, "CATCT":734238, "CATCC":442623, "CATCG":203570, "CATGA":853827, "CATGT":1137881, "CATGC":503821, "CATGG":843194, "CACAA":1003486, "CACAT":859604, "CACAC":1510507, "CACAG":1100874, "CACTA":547710, "CACTT":619408, "CACTC":424483, "CACTG":891620, "CACCA":663244, "CACCT":477655, "CACCC":271166, "CACCG":203327, "CACGA":190423, "CACGT":270889, "CACGC":160268, "CACGG":220477, "CAGAA":1236655, "CAGAT":919719, 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"GC":[0.425361,0.426394,0.420913,0.426928,0.422301,0.427182,0.431423,0.427312,0.419543,0.427363,0.425317,0.421349,0.426699,0.429334,0.419045,0.42264,0.421639,0.423305,0.422181,0.425665,0.419073,0.426747,0.420954,0.426601,0.422524,0.425323,0.417888,0.431553,0.422521,0.424677,0.423048,0.427903,0.418112,0.430216,0.423672,0.424064,0.419506,0.427381,0.420045,0.425638,0.422026,0.423793,0.419747,0.424037,0.419301,0.426025,0.417849,0.422607,0.425257,0.424415,0.417718,0.424872,0.421365,0.419802,0.422856,0.425991,0.417515,0.422013,0.420538,0.421624,0.421423,0.423979,0.415227,0.422452,0.418362,0.423176,0.419881,0.42177,0.415548,0.427452,0.418892,0.420485,0.418958,0.42443,0.414581,0.426331,0.42081,0.419945,0.417356,0.423407,0.418411,0.424154,0.416825,0.419754,0.417622,0.421966] }, "kmer_count": { "AAAAA":2256609, "AAAAT":1548481, "AAAAC":1265645, "AAAAG":851860, "AAATA":1602744, "AAATT":957773, "AAATC":849572, "AAATG":1382491, "AAACA":1865794, "AAACT":994712, "AAACC":945902, "AAACG":345236, 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"CGCTC":510224, "CGCTG":319186, "CGCCA":267026, "CGCCT":221052, "CGCCC":258078, "CGCCG":87601, "CGCGA":51873, "CGCGT":59298, "CGCGC":97567, "CGCGG":51701, "CGGAA":219929, "CGGAT":133129, "CGGAC":159003, "CGGAG":191058, "CGGTA":177658, "CGGTT":170282, "CGGTC":174947, "CGGTG":200335, "CGGCA":194950, "CGGCT":190969, "CGGCC":181532, "CGGCG":83877, "CGGGA":135163, "CGGGT":102075, "CGGGC":104110, "CGGGG":115766, "GAAAA":925053, "GAAAT":889540, "GAAAC":723058, "GAAAG":570273, "GAATA":634802, "GAATT":611397, "GAATC":425532, "GAATG":643699, "GAACA":879204, "GAACT":523691, "GAACC":483629, "GAACG":226807, "GAAGA":664456, "GAAGT":546617, "GAAGC":422762, "GAAGG":432906, "GATAA":496249, "GATAT":628133, "GATAC":437269, "GATAG":325301, "GATTA":550468, "GATTT":847571, "GATTC":456990, "GATTG":491507, "GATCA":572424, "GATCT":548619, "GATCC":391288, "GATCG":214863, "GATGA":679197, "GATGT":753645, "GATGC":454411, "GATGG":464461, "GACAA":884233, "GACAT":915235, "GACAC":974559, "GACAG":821144, "GACTA":546979, "GACTT":569335, "GACTC":606408, "GACTG":757275, "GACCA":802900, "GACCT":560158, "GACCC":552098, "GACCG":162803, "GACGA":238387, "GACGT":217080, "GACGC":164123, "GACGG":173405, "GAGAA":708460, "GAGAT":546402, "GAGAC":629117, "GAGAG":840453, "GAGTA":393224, "GAGTT":464356, "GAGTC":367053, "GAGTG":446806, "GAGCA":480008, "GAGCT":483899, "GAGCC":398975, "GAGCG":174427, "GAGGA":594509, "GAGGT":423905, "GAGGC":362518, "GAGGG":309863, "GTAAA":861580, "GTAAT":720034, "GTAAC":602610, "GTAAG":336337, "GTATA":767738, "GTATT":934572, "GTATC":548290, "GTATG":575806, "GTACA":890379, "GTACT":753539, "GTACC":575235, "GTACG":157862, "GTAGA":498250, "GTAGT":497565, "GTAGC":428230, "GTAGG":333473, "GTTAA":674611, "GTTAT":776744, "GTTAC":688163, "GTTAG":441716, "GTTTA":920171, "GTTTT":1421338, "GTTTC":879760, "GTTTG":898210, "GTTCA":832235, "GTTCT":930326, "GTTCC":640207, "GTTCG":143426, "GTTGA":666538, "GTTGT":904540, "GTTGC":520284, "GTTGG":422543, "GTCAA":711839, "GTCAT":916671, "GTCAC":721761, "GTCAG":690204, "GTCTA":670986, "GTCTT":787022, "GTCTC":1382036, "GTCTG":1040349, "GTCCA":723317, "GTCCT":804944, "GTCCC":606634, "GTCCG":175616, "GTCGA":143872, "GTCGT":206265, "GTCGC":146441, "GTCGG":125050, "GTGAA":640998, "GTGAT":556202, "GTGAC":521961, "GTGAG":393108, "GTGTA":731254, "GTGTT":1083757, "GTGTC":722569, "GTGTG":1510394, "GTGCA":562765, "GTGCT":550359, "GTGCC":415343, "GTGCG":152697, "GTGGA":544347, "GTGGT":506422, "GTGGC":390130, "GTGGG":298667, "GCAAA":623674, "GCAAT":507434, "GCAAC":602964, "GCAAG":405844, "GCATA":463378, "GCATT":715379, "GCATC":515880, "GCATG":503314, "GCACA":829333, "GCACT":572285, "GCACC":507283, "GCACG":166230, "GCAGA":581294, "GCAGT":561164, "GCAGC":698423, "GCAGG":449650, "GCTAA":519064, "GCTAT":563157, "GCTAC":706895, "GCTAG":387194, "GCTTA":328284, "GCTTT":826581, "GCTTC":629721, "GCTTG":382584, "GCTCA":589304, "GCTCT":1074349, "GCTCC":930878, "GCTCG":193061, "GCTGA":612020, "GCTGT":930109, "GCTGC":980308, "GCTGG":547564, "GCCAA":611973, "GCCAT":709169, "GCCAC":639176, "GCCAG":492702, "GCCTA":461698, "GCCTT":619814, "GCCTC":671432, "GCCTG":522801, "GCCCA":575322, "GCCCT":536462, "GCCCC":516470, "GCCCG":131911, "GCCGA":153051, "GCCGT":163756, "GCCGC":165029, "GCCGG":127107, "GCGAA":127875, "GCGAT":122223, "GCGAC":128672, "GCGAG":113204, "GCGTA":109601, "GCGTT":187162, "GCGTC":159211, "GCGTG":158543, "GCGCA":152103, "GCGCT":198022, "GCGCC":137285, "GCGCG":69625, "GCGGA":99057, "GCGGT":129522, "GCGGC":117859, "GCGGG":84607, "GGAAA":706266, "GGAAT":486756, "GGAAC":460286, "GGAAG":452836, "GGATA":358001, "GGATT":466142, "GGATC":339304, "GGATG":447043, "GGACA":746861, "GGACT":454384, "GGACC":380295, "GGACG":160668, "GGAGA":602373, "GGAGT":392459, "GGAGC":363295, "GGAGG":436390, "GGTAA":414324, "GGTAT":421475, "GGTAC":467855, "GGTAG":300400, "GGTTA":431750, "GGTTT":625353, "GGTTC":352274, "GGTTG":384994, "GGTCA":570025, "GGTCT":530438, "GGTCC":344097, "GGTCG":111759, "GGTGA":432490, "GGTGT":575344, "GGTGC":309309, "GGTGG":354359, "GGCAA":403597, "GGCAT":411181, "GGCAC":374414, "GGCAG":441846, "GGCTA":453670, "GGCTT":420633, "GGCTC":403575, "GGCTG":507798, "GGCCA":525876, "GGCCT":477317, "GGCCC":342085, "GGCCG":144229, "GGCGA":124613, "GGCGT":114613, "GGCGC":119193, "GGCGG":117436, "GGGAA":394504, "GGGAT":305606, "GGGAC":297792, "GGGAG":316968, "GGGTA":266108, "GGGTT":309479, "GGGTC":240092, "GGGTG":282618, "GGGCA":284908, "GGGCT":268203, "GGGCC":261942, "GGGCG":82572, "GGGGA":271944, "GGGGT":219982, "GGGGC":179079, "GGGGG":211845 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212417_sample_1703718_S113_L002_R1_001.fastq.gz --in2 lib_212417_sample_1703718_S113_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L002_R2_001.fastp-trim.fq.gz " }