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"GC":[0.668312,0.510479,0.407004,0.436133,0.407593,0.4115,0.337644,0.424307,0.47108,0.349242,0.508428,0.489391,0.424102,0.419921,0.409501,0.420617,0.43833,0.414067,0.434026,0.419191,0.433013,0.416765,0.425526,0.42394,0.420297,0.434217,0.430573,0.415031,0.441424,0.412875,0.429915,0.419271,0.430855,0.416655,0.437691,0.414375,0.41891,0.433624,0.433872,0.413407,0.427255,0.426484,0.424928,0.422412,0.419869,0.429974,0.431439,0.426252,0.434754,0.427175,0.421467,0.413198,0.437241,0.42918,0.433231,0.434409,0.426824,0.428582,0.434112,0.417605,0.434861,0.428595,0.434906,0.433605,0.441144,0.418525,0.439401,0.430531,0.425698,0.419293,0.433509,0.429383,0.435726,0.440572,0.439527,0.434679,0.444631,0.432307,0.439395,0.440928,0.439003,0.435797,0.445296,0.435714,0.443469,0.443767,0.442525,0.439222,0.451559,0.43809,0.445833,0.446282,0.444184,0.442305,0.450966,0.442745,0.447047,0.44758,0.446561,0.442467,0.456057] }, "kmer_count": { "AAAAA":3840315, "AAAAT":2488685, "AAAAC":1742905, "AAAAG":2021882, 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"AGGTT":1229835, "AGGTC":680526, "AGGTG":1508389, "AGGCA":1059103, "AGGCT":890073, "AGGCC":562192, "AGGCG":272687, "AGGGA":2109044, "AGGGT":1813828, "AGGGC":650922, "AGGGG":2095474, "TAAAA":2260993, "TAAAT":1763102, "TAAAC":1106863, "TAAAG":1354971, "TAATA":1479689, "TAATT":1129836, "TAATC":654120, "TAATG":1811340, "TAACA":1483726, "TAACT":827464, "TAACC":505677, "TAACG":314952, "TAAGA":1045890, "TAAGT":788827, "TAAGC":399662, "TAAGG":977091, "TATAA":1416845, "TATAT":2029065, "TATAC":956236, "TATAG":1621803, "TATTA":1307955, "TATTT":1872751, "TATTC":782420, "TATTG":1293116, "TATCA":861374, "TATCT":683963, "TATCC":403866, "TATCG":244748, "TATGA":1153866, "TATGT":1840313, "TATGC":594247, "TATGG":1229931, "TACAA":1179601, "TACAT":1412635, "TACAC":873809, "TACAG":1831706, "TACTA":715838, "TACTT":828044, "TACTC":457836, "TACTG":1334081, "TACCA":734294, "TACCT":626791, "TACCC":297885, "TACCG":199095, "TACGA":235997, "TACGT":291482, "TACGC":129669, "TACGG":261453, "TAGAA":1462886, 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"CACAC":3215124, "CACAG":1929760, "CACTA":659014, "CACTT":733602, "CACTC":495973, "CACTG":1057184, "CACCA":783144, "CACCT":554461, "CACCC":314077, "CACCG":237244, "CACGA":238308, "CACGT":1547261, "CACGC":192115, "CACGG":266773, "CAGAA":2065584, "CAGAT":1709726, "CAGAC":1222612, "CAGAG":2634350, "CAGTA":1700798, "CAGTT":1149666, "CAGTC":1562917, "CAGTG":1781547, "CAGCA":1263634, "CAGCT":1442753, "CAGCC":572977, "CAGCG":380813, "CAGGA":1330938, "CAGGT":1235920, "CAGGC":619221, "CAGGG":1299647, "CTAAA":977894, "CTAAT":663511, "CTAAC":530270, "CTAAG":472855, "CTATA":1025305, "CTATT":749546, "CTATC":365315, "CTATG":788775, "CTACA":911407, "CTACT":558495, "CTACC":351024, "CTACG":217011, "CTAGA":750404, "CTAGT":811929, "CTAGC":450372, "CTAGG":587459, "CTTAA":601516, "CTTAT":583021, "CTTAC":388271, "CTTAG":369497, "CTTTA":861825, "CTTTT":981665, "CTTTC":659607, "CTTTG":911925, "CTTCA":872693, "CTTCT":786426, "CTTCC":466204, "CTTCG":178497, "CTTGA":861388, "CTTGT":923749, "CTTGC":477522, 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"GC":[0.426261,0.426793,0.421226,0.427344,0.422223,0.427251,0.431743,0.427008,0.419382,0.427193,0.425508,0.421546,0.426373,0.4299,0.418672,0.422641,0.421508,0.423243,0.422284,0.425653,0.41902,0.426914,0.4208,0.426566,0.422688,0.425381,0.418567,0.431498,0.42253,0.424172,0.422998,0.427998,0.418576,0.430129,0.423776,0.423694,0.419883,0.427712,0.420125,0.426008,0.421896,0.423725,0.420111,0.423915,0.419131,0.426022,0.417787,0.4227,0.425354,0.424332,0.418148,0.425129,0.420921,0.420112,0.422541,0.426216,0.416945,0.422379,0.420426,0.421591,0.420998,0.424151,0.415385,0.422173,0.418637,0.423276,0.419976,0.421368,0.415912,0.427609,0.418734,0.420087,0.41964,0.424721,0.414694,0.426702,0.420791,0.420202,0.417414,0.423529,0.418326,0.424127,0.417302,0.420102,0.417982,0.421757] }, "kmer_count": { "AAAAA":2259670, "AAAAT":1550080, "AAAAC":1269121, "AAAAG":856220, "AAATA":1603489, "AAATT":961658, "AAATC":850718, "AAATG":1383289, "AAACA":1873809, "AAACT":996712, "AAACC":948076, "AAACG":346110, 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"CCCCA":1162933, "CCCCT":1338417, "CCCCC":958682, "CCCCG":279902, "CCCGA":171244, "CCCGT":239888, "CCCGC":207800, "CCCGG":163247, "CCGAA":151273, "CCGAT":215127, "CCGAC":236048, "CCGAG":178960, "CCGTA":208651, "CCGTT":282366, "CCGTC":284815, "CCGTG":216299, "CCGCA":205160, "CCGCT":269494, "CCGCC":254373, "CCGCG":63128, "CCGGA":146126, "CCGGT":168828, "CCGGC":164406, "CCGGG":130589, "CGAAA":199584, "CGAAT":158867, "CGAAC":156452, "CGAAG":139479, "CGATA":194085, "CGATT":208730, "CGATC":173094, "CGATG":208328, "CGACA":332373, "CGACT":227881, "CGACC":251005, "CGACG":103176, "CGAGA":231923, "CGAGT":141462, "CGAGC":142389, "CGAGG":159553, "CGTAA":193148, "CGTAT":192444, "CGTAC":185377, "CGTAG":182673, "CGTTA":270264, "CGTTT":421048, "CGTTC":269084, "CGTTG":265469, "CGTCA":306743, "CGTCT":360161, "CGTCC":246634, "CGTCG":88523, "CGTGA":178766, "CGTGT":287648, "CGTGC":184121, "CGTGG":179788, "CGCAA":217237, "CGCAT":185425, "CGCAC":250979, "CGCAG":206985, "CGCTA":234473, "CGCTT":218335, "CGCTC":514086, "CGCTG":320623, "CGCCA":268264, "CGCCT":221888, "CGCCC":257789, "CGCCG":87646, "CGCGA":51542, "CGCGT":59144, "CGCGC":96835, "CGCGG":51319, "CGGAA":220866, "CGGAT":132955, "CGGAC":159317, "CGGAG":191292, "CGGTA":177924, "CGGTT":170701, "CGGTC":173977, "CGGTG":199905, "CGGCA":196171, "CGGCT":190679, "CGGCC":181367, "CGGCG":84031, "CGGGA":135798, "CGGGT":101157, "CGGGC":104095, "CGGGG":116374, "GAAAA":928731, "GAAAT":892553, "GAAAC":728801, "GAAAG":575975, "GAATA":636349, "GAATT":612169, "GAATC":427489, "GAATG":645536, "GAACA":883712, "GAACT":525952, "GAACC":483164, "GAACG":227153, "GAAGA":666572, "GAAGT":548472, "GAAGC":424348, "GAAGG":434390, "GATAA":496391, "GATAT":630905, "GATAC":439400, "GATAG":323694, "GATTA":553810, "GATTT":850359, "GATTC":460230, "GATTG":491493, "GATCA":574640, "GATCT":550599, "GATCC":393725, "GATCG":216219, "GATGA":681694, "GATGT":753440, "GATGC":456526, "GATGG":466015, "GACAA":888394, "GACAT":919298, "GACAC":977005, "GACAG":821510, "GACTA":550431, "GACTT":571969, "GACTC":611368, "GACTG":759731, "GACCA":809431, "GACCT":562745, "GACCC":552475, "GACCG":163815, "GACGA":238404, "GACGT":218000, "GACGC":164658, "GACGG":173681, "GAGAA":709358, "GAGAT":547703, "GAGAC":630287, "GAGAG":847140, "GAGTA":393700, "GAGTT":465511, "GAGTC":366902, "GAGTG":448153, "GAGCA":482783, "GAGCT":486531, "GAGCC":400885, "GAGCG":175529, "GAGGA":597825, "GAGGT":424437, "GAGGC":364308, "GAGGG":312202, "GTAAA":859616, "GTAAT":723298, "GTAAC":602527, "GTAAG":336188, "GTATA":770489, "GTATT":935628, "GTATC":551014, "GTATG":579098, "GTACA":891322, "GTACT":758099, "GTACC":576007, "GTACG":158930, "GTAGA":502412, "GTAGT":498956, "GTAGC":428989, "GTAGG":334931, "GTTAA":677159, "GTTAT":779745, "GTTAC":691162, "GTTAG":443723, "GTTTA":921419, "GTTTT":1423416, "GTTTC":881087, "GTTTG":901005, "GTTCA":833357, "GTTCT":934922, "GTTCC":643056, "GTTCG":142575, "GTTGA":669363, "GTTGT":904749, "GTTGC":521749, "GTTGG":425305, "GTCAA":716168, "GTCAT":918991, "GTCAC":721817, "GTCAG":689475, "GTCTA":672185, "GTCTT":790668, "GTCTC":1382682, "GTCTG":1040156, "GTCCA":725169, "GTCCT":805381, "GTCCC":607657, "GTCCG":176434, "GTCGA":145157, "GTCGT":206783, "GTCGC":148160, "GTCGG":125378, "GTGAA":642546, "GTGAT":556777, "GTGAC":524960, "GTGAG":393829, "GTGTA":733546, "GTGTT":1084736, "GTGTC":723916, "GTGTG":1518363, "GTGCA":563841, "GTGCT":551575, "GTGCC":415515, "GTGCG":152072, "GTGGA":546427, "GTGGT":507757, "GTGGC":389907, "GTGGG":297578, "GCAAA":624465, "GCAAT":508818, "GCAAC":602001, "GCAAG":408735, "GCATA":463031, "GCATT":716966, "GCATC":518794, "GCATG":504414, "GCACA":832143, "GCACT":573365, "GCACC":510870, "GCACG":166628, "GCAGA":584163, "GCAGT":564269, "GCAGC":703502, "GCAGG":449435, "GCTAA":520570, "GCTAT":566061, "GCTAC":707114, "GCTAG":386464, "GCTTA":329546, "GCTTT":828934, "GCTTC":634054, "GCTTG":383765, "GCTCA":591523, "GCTCT":1080148, "GCTCC":933642, "GCTCG":193823, "GCTGA":612011, "GCTGT":935220, "GCTGC":984449, "GCTGG":549874, "GCCAA":612971, "GCCAT":712757, "GCCAC":641867, "GCCAG":494309, "GCCTA":464853, "GCCTT":623150, "GCCTC":672819, "GCCTG":522794, "GCCCA":575887, "GCCCT":540200, "GCCCC":516645, "GCCCG":131774, "GCCGA":153765, "GCCGT":164469, "GCCGC":166240, "GCCGG":126246, "GCGAA":127364, "GCGAT":122253, "GCGAC":129537, "GCGAG":113142, "GCGTA":110188, "GCGTT":187925, "GCGTC":159114, "GCGTG":159110, "GCGCA":152628, "GCGCT":197015, "GCGCC":137311, "GCGCG":68754, "GCGGA":98997, "GCGGT":129483, "GCGGC":118020, "GCGGG":84883, "GGAAA":709695, "GGAAT":488122, "GGAAC":460759, "GGAAG":453145, "GGATA":357884, "GGATT":468517, "GGATC":341450, "GGATG":447358, "GGACA":747712, "GGACT":457261, "GGACC":383401, "GGACG":161297, "GGAGA":604552, "GGAGT":393481, "GGAGC":363943, "GGAGG":439074, "GGTAA":413399, "GGTAT":423553, "GGTAC":468263, "GGTAG":302726, "GGTTA":433748, "GGTTT":625690, "GGTTC":352824, "GGTTG":383649, "GGTCA":571919, "GGTCT":530490, "GGTCC":343479, "GGTCG":111826, "GGTGA":434275, "GGTGT":574989, "GGTGC":308168, "GGTGG":354144, "GGCAA":404932, "GGCAT":413581, "GGCAC":375629, "GGCAG":441965, "GGCTA":455314, "GGCTT":420826, "GGCTC":405224, "GGCTG":508052, "GGCCA":527199, "GGCCT":477250, "GGCCC":345220, "GGCCG":146098, "GGCGA":124014, "GGCGT":116148, "GGCGC":118761, "GGCGG":117583, "GGGAA":395345, "GGGAT":306318, "GGGAC":298264, "GGGAG":318794, "GGGTA":266155, "GGGTT":309122, "GGGTC":238352, "GGGTG":281737, "GGGCA":285784, "GGGCT":268175, "GGGCC":262981, "GGGCG":82808, "GGGGA":271986, "GGGGT":219967, "GGGGC":179489, "GGGGG":208706 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212417_sample_1703718_S113_L001_R1_001.fastq.gz --in2 lib_212417_sample_1703718_S113_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212417_sample_1703718_S113_L001_R2_001.fastp-trim.fq.gz " }