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"GC":[0.671568,0.509592,0.403805,0.436911,0.4143,0.413739,0.335852,0.426483,0.470744,0.347348,0.513704,0.490061,0.420642,0.423774,0.405992,0.420681,0.442727,0.410797,0.434393,0.419589,0.433864,0.415638,0.427774,0.425654,0.418579,0.439714,0.431984,0.411515,0.447176,0.40895,0.430175,0.419748,0.431624,0.412921,0.425264,0.427263,0.414745,0.437347,0.417406,0.426145,0.444585,0.411156,0.439419,0.423912,0.416755,0.432121,0.434796,0.427729,0.435736,0.423664,0.417889,0.409694,0.445526,0.429591,0.433631,0.438304,0.417049,0.428274,0.429818,0.412871,0.435003,0.426363,0.436286,0.434812,0.437346,0.414064,0.43986,0.428476,0.421169,0.416379,0.434945,0.430644,0.437118,0.444898,0.44004,0.435364,0.447792,0.432554,0.438627,0.444696,0.439134,0.435641,0.449554,0.435879,0.445979,0.449116,0.444092,0.440083,0.455835,0.438584,0.446309,0.45044,0.444308,0.442519,0.454632,0.44326,0.447491,0.450535,0.446782,0.442105,0.458622] }, "kmer_count": { "AAAAA":3826141, "AAAAT":2482146, "AAAAC":1732850, "AAAAG":2044605, 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"ACGCT":225240, "ACGCC":134664, "ACGCG":70153, "ACGGA":365868, "ACGGT":321883, "ACGGC":190798, "ACGGG":317642, "AGAAA":2649503, "AGAAT":1432626, "AGAAC":1108193, "AGAAG":2199805, "AGATA":1735618, "AGATT":977587, "AGATC":2398769, "AGATG":1968727, "AGACA":2625182, "AGACT":985794, "AGACC":646353, "AGACG":456297, "AGAGA":10579051, "AGAGT":1768194, "AGAGC":2911377, "AGAGG":3597089, "AGTAA":1392391, "AGTAT":1265930, "AGTAC":891302, "AGTAG":3151209, "AGTTA":1190040, "AGTTT":1182853, "AGTTC":611603, "AGTTG":1784849, "AGTCA":1928624, "AGTCT":892092, "AGTCC":518603, "AGTCG":246201, "AGTGA":1885298, "AGTGT":2273857, "AGTGC":672779, "AGTGG":1951535, "AGCAA":1119350, "AGCAT":1069716, "AGCAC":2031433, "AGCAG":2312125, "AGCTA":887706, "AGCTT":717109, "AGCTC":571604, "AGCTG":2163235, "AGCCA":792210, "AGCCT":699924, "AGCCC":308738, "AGCCG":240759, "AGCGA":635799, "AGCGT":365857, "AGCGC":223460, "AGCGG":342168, "AGGAA":1766528, "AGGAT":1163553, "AGGAC":1024251, "AGGAG":2888650, "AGGTA":1518470, "AGGTT":1309614, "AGGTC":1093394, "AGGTG":1529274, "AGGCA":1014788, "AGGCT":858052, "AGGCC":549759, "AGGCG":259102, "AGGGA":2066306, "AGGGT":1782448, "AGGGC":643386, "AGGGG":2115840, "TAAAA":2258448, "TAAAT":1737605, "TAAAC":1070168, "TAAAG":1344067, "TAATA":1414188, "TAATT":1111073, "TAATC":620118, "TAATG":1771285, "TAACA":1449545, "TAACT":817802, "TAACC":476955, "TAACG":308436, "TAAGA":1051508, "TAAGT":790467, "TAAGC":395208, "TAAGG":926532, "TATAA":1355206, "TATAT":2057699, "TATAC":956056, "TATAG":1646959, "TATTA":1309860, "TATTT":1871816, "TATTC":767141, "TATTG":1338271, "TATCA":849994, "TATCT":699357, "TATCC":397066, "TATCG":239637, "TATGA":1161644, "TATGT":1885430, "TATGC":807043, "TATGG":1245931, "TACAA":1187441, "TACAT":1434463, "TACAC":856771, "TACAG":1839622, "TACTA":737940, "TACTT":815722, "TACTC":447376, "TACTG":1261664, "TACCA":652083, "TACCT":603129, "TACCC":291495, "TACCG":193924, "TACGA":223350, "TACGT":290262, "TACGC":126593, "TACGG":258592, "TAGAA":1432792, 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"CACAC":3112533, "CACAG":1337832, "CACTA":666147, "CACTT":1312522, "CACTC":490169, "CACTG":1041848, "CACCA":765575, "CACCT":556375, "CACCC":311997, "CACCG":229878, "CACGA":234318, "CACGT":1499089, "CACGC":184086, "CACGG":258137, "CAGAA":1510541, "CAGAT":1622788, "CAGAC":1197373, "CAGAG":3029540, "CAGTA":1662817, "CAGTT":1213316, "CAGTC":1525875, "CAGTG":1747768, "CAGCA":1262655, "CAGCT":1823621, "CAGCC":561935, "CAGCG":375392, "CAGGA":1322723, "CAGGT":1182371, "CAGGC":593875, "CAGGG":1252822, "CTAAA":954907, "CTAAT":636897, "CTAAC":523298, "CTAAG":474766, "CTATA":978815, "CTATT":747916, "CTATC":353105, "CTATG":799661, "CTACA":909936, "CTACT":549919, "CTACC":344807, "CTACG":206963, "CTAGA":748253, "CTAGT":787387, "CTAGC":445176, "CTAGG":617381, "CTTAA":597941, "CTTAT":579037, "CTTAC":375837, "CTTAG":365661, "CTTTA":854665, "CTTTT":967394, "CTTTC":640336, "CTTTG":898223, "CTTCA":1406629, "CTTCT":883576, "CTTCC":457859, "CTTCG":185255, "CTTGA":941381, "CTTGT":930823, "CTTGC":467274, 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"GC":[0.425203,0.425587,0.42137,0.427183,0.421675,0.426425,0.432951,0.426944,0.418923,0.428971,0.426964,0.421011,0.426106,0.431173,0.418222,0.422473,0.422911,0.423564,0.420808,0.42572,0.419127,0.426746,0.41997,0.427478,0.423066,0.425209,0.417398,0.434506,0.422045,0.42366,0.423201,0.428859,0.416864,0.430368,0.424951,0.423061,0.419076,0.428882,0.419847,0.424417,0.421892,0.423429,0.41934,0.424147,0.419761,0.42669,0.417239,0.422227,0.427615,0.424681,0.417116,0.425463,0.422109,0.419298,0.423118,0.427186,0.416264,0.421795,0.42098,0.421716,0.420723,0.424391,0.415735,0.422681,0.41812,0.424195,0.42037,0.420674,0.41517,0.429979,0.419634,0.419842,0.420686,0.425933,0.413391,0.426454,0.422149,0.419992,0.417168,0.425526,0.418777,0.424392,0.418135,0.420692,0.417791,0.422991] }, "kmer_count": { "AAAAA":2266247, "AAAAT":1540587, "AAAAC":1319089, "AAAAG":838672, "AAATA":1599320, "AAATT":950716, "AAATC":848769, "AAATG":1374916, "AAACA":1874251, "AAACT":1001351, "AAACC":1003288, "AAACG":341192, 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"CCCCA":1219680, "CCCCT":1329033, "CCCCC":937819, "CCCCG":266315, "CCCGA":164052, "CCCGT":235976, "CCCGC":196606, "CCCGG":158050, "CCGAA":147187, "CCGAT":206284, "CCGAC":213019, "CCGAG":177586, "CCGTA":206297, "CCGTT":253425, "CCGTC":281053, "CCGTG":210890, "CCGCA":204367, "CCGCT":275368, "CCGCC":246155, "CCGCG":60551, "CCGGA":140505, "CCGGT":167481, "CCGGC":157609, "CCGGG":127620, "CGAAA":193256, "CGAAT":152958, "CGAAC":158822, "CGAAG":133043, "CGATA":191297, "CGATT":206150, "CGATC":174857, "CGATG":202418, "CGACA":359882, "CGACT":204621, "CGACC":241998, "CGACG":104714, "CGAGA":220315, "CGAGT":137793, "CGAGC":139910, "CGAGG":158226, "CGTAA":191804, "CGTAT":190540, "CGTAC":180830, "CGTAG":175303, "CGTTA":265916, "CGTTT":381659, "CGTTC":264374, "CGTTG":254395, "CGTCA":298800, "CGTCT":359413, "CGTCC":238340, "CGTCG":86638, "CGTGA":173167, "CGTGT":283872, "CGTGC":180069, "CGTGG":179334, "CGCAA":219176, "CGCAT":179152, "CGCAC":247477, "CGCAG":202833, "CGCTA":233515, "CGCTT":204355, "CGCTC":489057, "CGCTG":317449, "CGCCA":261468, "CGCCT":211949, "CGCCC":241496, "CGCCG":82316, "CGCGA":50409, "CGCGT":57520, "CGCGC":87728, "CGCGG":50130, "CGGAA":211992, "CGGAT":131549, "CGGAC":154178, "CGGAG":186812, "CGGTA":172517, "CGGTT":168677, "CGGTC":173300, "CGGTG":196235, "CGGCA":192692, "CGGCT":190539, "CGGCC":177850, "CGGCG":80186, "CGGGA":132834, "CGGGT":100345, "CGGGC":102459, "CGGGG":112542, "GAAAA":915798, "GAAAT":882317, "GAAAC":715496, "GAAAG":562066, "GAATA":630916, "GAATT":601830, "GAATC":432668, "GAATG":637618, "GAACA":885934, "GAACT":517745, "GAACC":477365, "GAACG":225682, "GAAGA":659731, "GAAGT":534392, "GAAGC":409761, "GAAGG":424563, "GATAA":489408, "GATAT":631362, "GATAC":451787, "GATAG":316949, "GATTA":523528, "GATTT":842008, "GATTC":459514, "GATTG":488063, "GATCA":569350, "GATCT":545667, "GATCC":394956, "GATCG":207386, "GATGA":675403, "GATGT":752238, "GATGC":449304, "GATGG":459278, "GACAA":906987, "GACAT":933234, "GACAC":964487, "GACAG":826205, "GACTA":548592, "GACTT":571285, "GACTC":568348, "GACTG":725123, "GACCA":797249, "GACCT":549081, "GACCC":529195, "GACCG":161018, "GACGA":237119, "GACGT":212977, "GACGC":156324, "GACGG":174297, "GAGAA":699848, "GAGAT":545933, "GAGAC":617799, "GAGAG":821047, "GAGTA":386162, "GAGTT":450374, "GAGTC":370033, "GAGTG":441620, "GAGCA":476151, "GAGCT":481291, "GAGCC":388398, "GAGCG":171239, "GAGGA":589090, "GAGGT":402269, "GAGGC":352319, "GAGGG":308271, "GTAAA":825409, "GTAAT":732745, "GTAAC":584059, "GTAAG":326132, "GTATA":768801, "GTATT":926564, "GTATC":538664, "GTATG":574509, "GTACA":903472, "GTACT":706237, "GTACC":556740, "GTACG":155453, "GTAGA":495324, "GTAGT":494125, "GTAGC":421458, "GTAGG":319769, "GTTAA":678505, "GTTAT":773024, "GTTAC":643841, "GTTAG":436327, "GTTTA":891267, "GTTTT":1417213, "GTTTC":831754, "GTTTG":861746, "GTTCA":814318, "GTTCT":923973, "GTTCC":674915, "GTTCG":137887, "GTTGA":665303, "GTTGT":894834, "GTTGC":555687, "GTTGG":420764, "GTCAA":719321, "GTCAT":894304, "GTCAC":707229, "GTCAG":669962, "GTCTA":674152, "GTCTT":789566, "GTCTC":1338227, "GTCTG":1025776, "GTCCA":714143, "GTCCT":803207, "GTCCC":588663, "GTCCG":147637, "GTCGA":142688, "GTCGT":199465, "GTCGC":147768, "GTCGG":121550, "GTGAA":632573, "GTGAT":556788, "GTGAC":522194, "GTGAG":390343, "GTGTA":713972, "GTGTT":1066312, "GTGTC":724045, "GTGTG":1483117, "GTGCA":558245, "GTGCT":544815, "GTGCC":406296, "GTGCG":147463, "GTGGA":539673, "GTGGT":498497, "GTGGC":386830, "GTGGG":294531, "GCAAA":620998, "GCAAT":499246, "GCAAC":635646, "GCAAG":402638, "GCATA":458738, "GCATT":709547, "GCATC":513808, "GCATG":500264, "GCACA":795646, "GCACT":557092, "GCACC":510768, "GCACG":162620, "GCAGA":571819, "GCAGT":549806, "GCAGC":738531, "GCAGG":440275, "GCTAA":494969, "GCTAT":556253, "GCTAC":763482, "GCTAG":383053, "GCTTA":326852, "GCTTT":807308, "GCTTC":635002, "GCTTG":376644, "GCTCA":582314, "GCTCT":1104452, "GCTCC":1182067, "GCTCG":190098, "GCTGA":613911, "GCTGT":942616, "GCTGC":1262653, "GCTGG":561404, "GCCAA":604351, "GCCAT":697147, "GCCAC":644409, "GCCAG":487259, "GCCTA":463079, "GCCTT":616648, "GCCTC":618158, "GCCTG":501464, "GCCCA":558371, "GCCCT":532343, "GCCCC":510570, "GCCCG":128033, "GCCGA":148650, "GCCGT":161275, "GCCGC":160000, "GCCGG":121689, "GCGAA":126116, "GCGAT":121253, "GCGAC":125155, "GCGAG":110299, "GCGTA":107085, "GCGTT":185007, "GCGTC":154993, "GCGTG":153627, "GCGCA":145997, "GCGCT":187974, "GCGCC":130315, "GCGCG":61545, "GCGGA":98617, "GCGGT":126728, "GCGGC":117844, "GCGGG":83766, "GGAAA":697651, "GGAAT":483568, "GGAAC":454768, "GGAAG":445122, "GGATA":354581, "GGATT":456752, "GGATC":336057, "GGATG":444257, "GGACA":757084, "GGACT":441052, "GGACC":366627, "GGACG":159474, "GGAGA":593320, "GGAGT":390606, "GGAGC":356514, "GGAGG":427637, "GGTAA":396445, "GGTAT":417525, "GGTAC":400948, "GGTAG":296255, "GGTTA":410926, "GGTTT":604497, "GGTTC":356091, "GGTTG":380121, "GGTCA":554379, "GGTCT":548811, "GGTCC":338939, "GGTCG":110471, "GGTGA":430846, "GGTGT":574940, "GGTGC":301041, "GGTGG":346436, "GGCAA":398606, "GGCAT":405211, "GGCAC":366644, "GGCAG":427999, "GGCTA":445663, "GGCTT":414326, "GGCTC":399738, "GGCTG":501032, "GGCCA":513251, "GGCCT":466210, "GGCCC":333478, "GGCCG":140794, "GGCGA":121580, "GGCGT":112162, "GGCGC":115510, "GGCGG":114209, "GGGAA":387500, "GGGAT":303985, "GGGAC":292290, "GGGAG":315751, "GGGTA":260829, "GGGTT":304271, "GGGTC":237767, "GGGTG":281170, "GGGCA":277680, "GGGCT":263585, "GGGCC":255770, "GGGCG":81435, "GGGGA":266409, "GGGGT":217746, "GGGGC":178761, "GGGGG":218205 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212416_sample_1703688_S105_L001_R1_001.fastq.gz --in2 lib_212416_sample_1703688_S105_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212416_sample_1703688_S105_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212416_sample_1703688_S105_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212416_sample_1703688_S105_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212416_sample_1703688_S105_L001_R2_001.fastp-trim.fq.gz " }