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"GC":[0.669122,0.500607,0.403241,0.427362,0.391951,0.386269,0.315768,0.404502,0.458007,0.344876,0.48632,0.477495,0.404963,0.409274,0.395373,0.408166,0.417713,0.401069,0.415116,0.400553,0.416792,0.39987,0.403507,0.410053,0.403389,0.411708,0.414647,0.398371,0.417081,0.398965,0.413363,0.398815,0.413034,0.400061,0.418337,0.399925,0.416216,0.402163,0.404587,0.415096,0.419541,0.400362,0.418762,0.404172,0.403791,0.417104,0.410779,0.413834,0.418888,0.407462,0.406483,0.405082,0.421636,0.418225,0.423269,0.418084,0.40917,0.41734,0.410716,0.403622,0.420491,0.410365,0.420797,0.419708,0.415012,0.407107,0.421753,0.412242,0.408323,0.409676,0.413393,0.417699,0.423527,0.422134,0.422752,0.423879,0.426809,0.424145,0.427504,0.425534,0.425851,0.427012,0.42899,0.423597,0.427042,0.428249,0.429054,0.428699,0.433435,0.427873,0.432015,0.430608,0.431739,0.432123,0.436522,0.433027,0.436495,0.435309,0.435853,0.438176,0.441075] }, "kmer_count": { "AAAAA":6312414, "AAAAT":2754090, "AAAAC":2100296, "AAAAG":2636763, 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"ACGCT":267471, "ACGCC":181825, "ACGCG":96956, "ACGGA":338307, "ACGGT":268155, "ACGGC":302300, "ACGGG":267610, "AGAAA":2492538, "AGAAT":1096637, "AGAAC":837806, "AGAAG":1979114, "AGATA":1024304, "AGATT":945485, "AGATC":2547801, "AGATG":1271559, "AGACA":1398816, "AGACT":760985, "AGACC":403381, "AGACG":463060, "AGAGA":2811363, "AGAGT":1026230, "AGAGC":2254021, "AGAGG":1687442, "AGTAA":1041234, "AGTAT":848200, "AGTAC":635347, "AGTAG":1420655, "AGTTA":892292, "AGTTT":1240611, "AGTTC":545024, "AGTTG":966147, "AGTCA":1564446, "AGTCT":691843, "AGTCC":510759, "AGTCG":296248, "AGTGA":1327065, "AGTGT":1323532, "AGTGC":684531, "AGTGG":887395, "AGCAA":1066719, "AGCAT":865591, "AGCAC":2026307, "AGCAG":1848558, "AGCTA":540666, "AGCTT":834920, "AGCTC":628641, "AGCTG":1115390, "AGCCA":698182, "AGCCT":522386, "AGCCC":332587, "AGCCG":282043, "AGCGA":368255, "AGCGT":359936, "AGCGC":218244, "AGCGG":323201, "AGGAA":1565809, "AGGAT":1002291, "AGGAC":821428, "AGGAG":1901779, "AGGTA":667191, "AGGTT":891307, "AGGTC":557844, "AGGTG":972340, "AGGCA":832457, "AGGCT":644862, "AGGCC":421370, "AGGCG":308382, "AGGGA":1036766, "AGGGT":762552, "AGGGC":509909, "AGGGG":1121943, "TAAAA":2796026, "TAAAT":1855313, "TAAAC":1113550, "TAAAG":1411815, "TAATA":1348450, "TAATT":1124684, "TAATC":589575, "TAATG":1243827, "TAACA":1174568, "TAACT":721695, "TAACC":350900, "TAACG":266058, "TAAGA":987977, "TAAGT":734451, "TAAGC":433603, "TAAGG":651501, "TATAA":1209073, "TATAT":1537165, "TATAC":605687, "TATAG":619647, "TATTA":1233661, "TATTT":1801317, "TATTC":665908, "TATTG":911203, "TATCA":785727, "TATCT":650635, "TATCC":352568, "TATCG":193971, "TATGA":906641, "TATGT":1195810, "TATGC":617759, "TATGG":590491, "TACAA":1236581, "TACAT":1106861, "TACAC":670880, "TACAG":1091358, "TACTA":502977, "TACTT":783235, "TACTC":388123, "TACTG":879359, "TACCA":447059, "TACCT":344312, "TACCC":178268, "TACCG":165811, "TACGA":238893, "TACGT":271301, "TACGC":131077, "TACGG":166751, "TAGAA":995575, "TAGAT":939168, "TAGAC":413367, 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"TGCCT":447331, "TGCCC":254803, "TGCCG":449066, "TGCGA":269272, "TGCGT":367607, "TGCGC":170409, "TGCGG":265552, "TGGAA":1183138, "TGGAT":974807, "TGGAC":706384, "TGGAG":1263852, "TGGTA":683554, "TGGTT":1111789, "TGGTC":681284, "TGGTG":1249087, "TGGCA":884912, "TGGCT":739427, "TGGCC":458913, "TGGCG":376832, "TGGGA":870633, "TGGGT":695583, "TGGGC":491756, "TGGGG":852809, "CAAAA":2175145, "CAAAT":1352861, "CAAAC":1231081, "CAAAG":1334742, "CAATA":1034356, "CAATT":837317, "CAATC":527029, "CAATG":958902, "CAACA":1499792, "CAACT":613674, "CAACC":368108, "CAACG":268331, "CAAGA":996580, "CAAGT":718983, "CAAGC":430991, "CAAGG":642967, "CATAA":980554, "CATAT":845289, "CATAC":526817, "CATAG":519747, "CATTA":1004693, "CATTT":1604651, "CATTC":637327, "CATTG":829122, "CATCA":1063297, "CATCT":813468, "CATCC":458477, "CATCG":261269, "CATGA":1011461, "CATGT":1115896, "CATGC":566216, "CATGG":709251, "CACAA":1192271, "CACAT":1021966, "CACAC":2634953, "CACAG":1161701, "CACTA":441941, "CACTT":755031, 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"GC":[0.413111,0.416122,0.408895,0.413028,0.410595,0.412949,0.413421,0.41444,0.405846,0.412374,0.408401,0.407964,0.408645,0.411719,0.405576,0.410291,0.406555,0.406494,0.408733,0.410185,0.407202,0.411009,0.407572,0.408267,0.409281,0.410476,0.40413,0.409264,0.409018,0.409384,0.409595,0.409551,0.403679,0.410697,0.404715,0.406645,0.405666,0.408031,0.404427,0.408625,0.407014,0.405328,0.406333,0.407253,0.402952,0.408872,0.403937,0.402652,0.405554,0.407124,0.40295,0.407494,0.403207,0.40288,0.405383,0.405923,0.401826,0.406652,0.402542,0.403063,0.403641,0.404603,0.40221,0.405783,0.402638,0.403453,0.403661,0.405548,0.400944,0.405173,0.402186,0.40079,0.403266,0.404977,0.400531,0.405639,0.403285,0.404122,0.403946,0.405931,0.401426,0.405343,0.401032,0.402431,0.404091,0.403207] }, "kmer_count": { "AAAAA":3364734, "AAAAT":1617039, "AAAAC":1366762, "AAAAG":1187192, "AAATA":1569708, "AAATT":1045330, "AAATC":917215, "AAATG":1380925, "AAACA":1849187, "AAACT":1042283, "AAACC":877102, "AAACG":368676, 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"CTGAT":845162, "CTGAC":692027, "CTGAG":621915, "CTGTA":890254, "CTGTT":1307105, "CTGTC":1041840, "CTGTG":947087, "CTGCA":1035241, "CTGCT":1133547, "CTGCC":636902, "CTGCG":239102, "CTGGA":644886, "CTGGT":585771, "CTGGC":468236, "CTGGG":351375, "CCAAA":1000046, "CCAAT":501243, "CCAAC":735199, "CCAAG":484186, "CCATA":467159, "CCATT":810742, "CCATC":814943, "CCATG":595976, "CCACA":841062, "CCACT":712006, "CCACC":760698, "CCACG":287675, "CCAGA":675074, "CCAGT":648779, "CCAGC":689658, "CCAGG":472023, "CCTAA":488259, "CCTAT":317776, "CCTAC":463538, "CCTAG":175023, "CCTTA":512339, "CCTTT":1081586, "CCTTC":942783, "CCTTG":507942, "CCTCA":996807, "CCTCT":1277519, "CCTCC":1228880, "CCTCG":297097, "CCTGA":679341, "CCTGT":759278, "CCTGC":654799, "CCTGG":485960, "CCCAA":559380, "CCCAT":507631, "CCCAC":567371, "CCCAG":534180, "CCCTA":374006, "CCCTT":670876, "CCCTC":912501, "CCCTG":558803, "CCCCA":586126, "CCCCT":720531, "CCCCC":777911, "CCCCG":267519, "CCCGA":179198, "CCCGT":206533, "CCCGC":212340, "CCCGG":198919, "CCGAA":158928, "CCGAT":164812, "CCGAC":241510, "CCGAG":191137, "CCGTA":139595, "CCGTT":255765, "CCGTC":331944, "CCGTG":222459, "CCGCA":215477, "CCGCT":258817, "CCGCC":268336, "CCGCG":101974, "CCGGA":194574, "CCGGT":154909, "CCGGC":208735, "CCGGG":133447, "CGAAA":226066, "CGAAT":122628, "CGAAC":129041, "CGAAG":131627, "CGATA":150814, "CGATT":172803, "CGATC":140775, "CGATG":224432, "CGACA":287180, "CGACT":235085, "CGACC":275110, "CGACG":130391, "CGAGA":192323, "CGAGT":161775, "CGAGC":201886, "CGAGG":173689, "CGTAA":188086, "CGTAT":174093, "CGTAC":198887, "CGTAG":146028, "CGTTA":223590, "CGTTT":399687, "CGTTC":234195, "CGTTG":218141, "CGTCA":320309, "CGTCT":378143, "CGTCC":277410, "CGTCG":153259, "CGTGA":192439, "CGTGT":293533, "CGTGC":175569, "CGTGG":200515, "CGCAA":191721, "CGCAT":204267, "CGCAC":229270, "CGCAG":232752, "CGCTA":163598, "CGCTT":249975, "CGCTC":282199, "CGCTG":333055, "CGCCA":280307, "CGCCT":261620, "CGCCC":283213, "CGCCG":163727, "CGCGA":61469, "CGCGT":78566, "CGCGC":61423, "CGCGG":107827, "CGGAA":150675, "CGGAT":154139, "CGGAC":204541, "CGGAG":236337, "CGGTA":141164, "CGGTT":190125, "CGGTC":143805, "CGGTG":209999, "CGGCA":216699, "CGGCT":235198, "CGGCC":222246, "CGGCG":133780, "CGGGA":148692, "CGGGT":97510, "CGGGC":114605, "CGGGG":124213, "GAAAA":1174199, "GAAAT":857876, "GAAAC":714143, "GAAAG":568508, "GAATA":568816, "GAATT":593373, "GAATC":388937, "GAATG":547201, "GAACA":726215, "GAACT":463465, "GAACC":408104, "GAACG":196009, "GAAGA":672439, "GAAGT":549684, "GAAGC":468051, "GAAGG":387477, "GATAA":560028, "GATAT":584466, "GATAC":338954, "GATAG":223534, "GATTA":515664, "GATTT":906204, "GATTC":416105, "GATTG":442095, "GATCA":619321, "GATCT":424100, "GATCC":370152, "GATCG":170605, "GATGA":724458, "GATGT":707023, "GATGC":446532, "GATGG":402173, "GACAA":740892, "GACAT":769872, "GACAC":617829, "GACAG":599206, "GACTA":357268, "GACTT":615805, "GACTC":480574, "GACTG":560266, "GACCA":589099, "GACCT":469494, "GACCC":352170, "GACCG":171404, "GACGA":252914, "GACGT":235945, "GACGC":219002, "GACGG":207338, "GAGAA":675011, "GAGAT":503019, "GAGAC":489695, "GAGAG":533466, "GAGTA":326203, "GAGTT":519025, "GAGTC":366692, "GAGTG":388423, "GAGCA":535939, "GAGCT":529765, "GAGCC":373619, "GAGCG":185304, "GAGGA":615218, "GAGGT":342863, "GAGGC":363313, "GAGGG":269260, "GTAAA":837542, "GTAAT":633666, "GTAAC":448133, "GTAAG":298301, "GTATA":502405, "GTATT":818108, "GTATC":416497, "GTATG":446023, "GTACA":665634, "GTACT":534920, "GTACC":258841, "GTACG":145627, "GTAGA":387148, "GTAGT":406029, "GTAGC":296472, "GTAGG":197214, "GTTAA":709794, "GTTAT":658433, "GTTAC":436039, "GTTAG":295617, "GTTTA":945269, "GTTTT":1696773, "GTTTC":835552, "GTTTG":1033167, "GTTCA":735441, "GTTCT":671523, "GTTCC":476658, "GTTCG":138194, "GTTGA":564786, "GTTGT":858679, "GTTGC":486366, "GTTGG":396480, "GTCAA":602797, "GTCAT":725571, "GTCAC":560383, "GTCAG":565675, "GTCTA":349522, "GTCTT":733506, "GTCTC":689051, "GTCTG":728587, "GTCCA":586628, "GTCCT":652445, "GTCCC":392943, "GTCCG":179909, "GTCGA":139051, "GTCGT":208381, "GTCGC":201602, "GTCGG":166533, "GTGAA":635146, "GTGAT":561354, "GTGAC":500546, "GTGAG":388956, "GTGTA":560706, "GTGTT":983569, "GTGTC":579789, "GTGTG":1173357, "GTGCA":571608, "GTGCT":598320, "GTGCC":359980, "GTGCG":144541, "GTGGA":489375, "GTGGT":427865, "GTGGC":338615, "GTGGG":243365, "GCAAA":720586, "GCAAT":437106, "GCAAC":571249, "GCAAG":399538, "GCATA":390148, "GCATT":689006, "GCATC":528046, "GCATG":496017, "GCACA":688233, "GCACT":572676, "GCACC":440770, "GCACG":149698, "GCAGA":685565, "GCAGT":564127, "GCAGC":808246, "GCAGG":448150, "GCTAA":443895, "GCTAT":368246, "GCTAC":376413, "GCTAG":185470, "GCTTA":353255, "GCTTT":969749, "GCTTC":660974, "GCTTG":362773, "GCTCA":611198, "GCTCT":675500, "GCTCC":543778, "GCTCG":189968, "GCTGA":654119, "GCTGT":894508, "GCTGC":782881, "GCTGG":492041, "GCCAA":558094, "GCCAT":569540, "GCCAC":454737, "GCCAG":430247, "GCCTA":221877, "GCCTT":605449, "GCCTC":569032, "GCCTG":416095, "GCCCA":396274, "GCCCT":416891, "GCCCC":397247, "GCCCG":176367, "GCCGA":169523, "GCCGT":242719, "GCCGC":205996, "GCCGG":153880, "GCGAA":96544, "GCGAT":112428, "GCGAC":181054, "GCGAG":151053, "GCGTA":114654, "GCGTT":211269, "GCGTC":202026, "GCGTG":179232, "GCGCA":143795, "GCGCT":176628, "GCGCC":196914, "GCGCG":67783, "GCGGA":131482, "GCGGT":120094, "GCGGC":166655, "GCGGG":96713, "GGAAA":677191, "GGAAT":379269, "GGAAC":345483, "GGAAG":397707, "GGATA":303740, "GGATT":389078, "GGATC":306029, "GGATG":405442, "GGACA":562129, "GGACT":435672, "GGACC":308231, "GGACG":197455, "GGAGA":533356, "GGAGT":337457, "GGAGC":379790, "GGAGG":432273, "GGTAA":312340, "GGTAT":311910, "GGTAC":215413, "GGTAG":156168, "GGTTA":307226, "GGTTT":631706, "GGTTC":332440, "GGTTG":314409, "GGTCA":413255, "GGTCT":350969, "GGTCC":252139, "GGTCG":124525, "GGTGA":395469, "GGTGT":434735, "GGTGC":364186, "GGTGG":281748, "GGCAA":383183, "GGCAT":337282, "GGCAC":278613, "GGCAG":379077, "GGCTA":236473, "GGCTT":438871, "GGCTC":394145, "GGCTG":480927, "GGCCA":395939, "GGCCT":364884, "GGCCC":260715, "GGCCG":204609, "GGCGA":121444, "GGCGT":159613, "GGCGC":113380, "GGCGG":136672, "GGGAA":331578, "GGGAT":251696, "GGGAC":255452, "GGGAG":264550, "GGGTA":158199, "GGGTT":256859, "GGGTC":188344, "GGGTG":208631, "GGGCA":232586, "GGGCT":275652, "GGGCC":231650, "GGGCG":104349, "GGGGA":204618, "GGGGT":149404, "GGGGC":190639, "GGGGG":194877 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212413_sample_1703687_S104_L001_R1_001.fastq.gz --in2 lib_212413_sample_1703687_S104_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212413_sample_1703687_S104_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212413_sample_1703687_S104_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212413_sample_1703687_S104_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212413_sample_1703687_S104_L001_R2_001.fastp-trim.fq.gz " }