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"GC":[0.681724,0.502156,0.397475,0.453726,0.431828,0.42951,0.329823,0.417027,0.487136,0.339535,0.527137,0.503319,0.411604,0.439953,0.397446,0.43604,0.458023,0.401143,0.44988,0.410602,0.449463,0.406763,0.419662,0.441171,0.409819,0.456054,0.448046,0.401928,0.46338,0.400678,0.445786,0.411483,0.448896,0.444606,0.416473,0.40107,0.447515,0.453243,0.450091,0.399811,0.418922,0.401731,0.414399,0.415026,0.408873,0.44689,0.433184,0.444046,0.451649,0.414812,0.408835,0.400984,0.461336,0.445721,0.45047,0.453836,0.409533,0.443755,0.423544,0.404321,0.451452,0.421148,0.452669,0.451077,0.435257,0.406857,0.456085,0.420794,0.413361,0.409498,0.432664,0.444123,0.451888,0.460306,0.455976,0.450528,0.463809,0.448105,0.454201,0.460143,0.454538,0.4505,0.464968,0.451098,0.461665,0.464568,0.458643,0.455498,0.471135,0.453377,0.461169,0.464816,0.459087,0.456283,0.469146,0.457596,0.461358,0.464436,0.460618,0.454527,0.472294] }, "kmer_count": { "AAAAA":3604730, "AAAAT":2315138, "AAAAC":1617455, "AAAAG":2035217, 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"AGGTT":1188499, "AGGTC":608012, "AGGTG":1418632, "AGGCA":930765, "AGGCT":784785, "AGGCC":502237, "AGGCG":251273, "AGGGA":1934804, "AGGGT":1660214, "AGGGC":593494, "AGGGG":2275984, "TAAAA":2091181, "TAAAT":1623916, "TAAAC":985351, "TAAAG":1237348, "TAATA":1313383, "TAATT":1023471, "TAATC":1261482, "TAATG":1651603, "TAACA":1340108, "TAACT":754624, "TAACC":433187, "TAACG":284825, "TAAGA":999007, "TAAGT":732230, "TAAGC":362998, "TAAGG":907619, "TATAA":1243376, "TATAT":1885944, "TATAC":877444, "TATAG":1509558, "TATTA":1263647, "TATTT":1718238, "TATTC":710490, "TATTG":1270828, "TATCA":781301, "TATCT":636568, "TATCC":375352, "TATCG":221381, "TATGA":1077975, "TATGT":1793226, "TATGC":1049840, "TATGG":1171169, "TACAA":1103859, "TACAT":1327329, "TACAC":798028, "TACAG":1682706, "TACTA":671076, "TACTT":751475, "TACTC":417829, "TACTG":1178052, "TACCA":621397, "TACCT":560843, "TACCC":268755, "TACCG":177548, "TACGA":211818, "TACGT":266386, "TACGC":116766, "TACGG":238966, "TAGAA":1326419, 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"CACAG":1271893, "CACTA":609129, "CACTT":666445, "CACTC":456999, "CACTG":968131, "CACCA":1655915, "CACCT":511232, "CACCC":293667, "CACCG":219171, "CACGA":221741, "CACGT":1781769, "CACGC":176881, "CACGG":240381, "CAGAA":1411592, "CAGAT":1520467, "CAGAC":1124975, "CAGAG":2406101, "CAGTA":1533822, "CAGTT":1130216, "CAGTC":1776970, "CAGTG":1634003, "CAGCA":1196876, "CAGCT":1861860, "CAGCC":518862, "CAGCG":348651, "CAGGA":1246570, "CAGGT":1087492, "CAGGC":546265, "CAGGG":1169257, "CTAAA":873887, "CTAAT":584259, "CTAAC":480482, "CTAAG":457571, "CTATA":902314, "CTATT":688890, "CTATC":323884, "CTATG":734599, "CTACA":847030, "CTACT":504937, "CTACC":317284, "CTACG":193680, "CTAGA":687079, "CTAGT":709418, "CTAGC":399577, "CTAGG":567394, "CTTAA":554705, "CTTAT":530550, "CTTAC":345887, "CTTAG":367088, "CTTTA":785060, "CTTTT":888487, "CTTTC":592203, "CTTTG":824245, "CTTCA":794350, "CTTCT":1021890, "CTTCC":416126, "CTTCG":199117, "CTTGA":1028254, "CTTGT":895991, "CTTGC":434091, "CTTGG":679816, 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"GC":[0.409498,0.432482,0.416733,0.423967,0.426769,0.423508,0.422907,0.435943,0.415315,0.425437,0.430728,0.422092,0.417324,0.43855,0.416395,0.420165,0.427767,0.423041,0.418877,0.432728,0.416572,0.42105,0.427505,0.424054,0.415426,0.435436,0.417283,0.430336,0.431169,0.423613,0.420757,0.438581,0.416822,0.424801,0.429639,0.423591,0.414854,0.435639,0.417903,0.422428,0.42677,0.420271,0.415806,0.4325,0.415881,0.42313,0.427057,0.423948,0.422526,0.438111,0.416751,0.427389,0.430921,0.42417,0.41571,0.436161,0.416797,0.421284,0.430645,0.424692,0.418238,0.432378,0.414374,0.420379,0.427185,0.419769,0.4158,0.431866,0.41609,0.427224,0.430346,0.422422,0.418738,0.436206,0.414836,0.423248,0.428074,0.420713,0.417454,0.432215,0.417721,0.42086,0.424297,0.418952,0.410311,0.430782] }, "kmer_count": { "AAAAA":2862850, "AAAAT":1903798, "AAAAC":1333514, "AAAAG":1432289, "AAATA":2019846, "AAATT":991547, "AAATC":765222, "AAATG":1644870, "AAACA":1976901, "AAACT":839896, "AAACC":553160, "AAACG":363085, 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"GC":[0.425236,0.426788,0.42245,0.428522,0.422147,0.428095,0.435486,0.428892,0.419743,0.43061,0.428301,0.422532,0.426744,0.432932,0.419566,0.423392,0.424836,0.425364,0.421565,0.426681,0.420723,0.427998,0.420593,0.429754,0.424656,0.425641,0.418543,0.436892,0.422721,0.425223,0.424551,0.431124,0.417947,0.43183,0.425966,0.424632,0.419316,0.430989,0.420622,0.425598,0.422731,0.425353,0.419974,0.424779,0.4212,0.427848,0.417093,0.423815,0.429463,0.425381,0.418255,0.426529,0.423263,0.420193,0.423517,0.429062,0.417497,0.421711,0.422055,0.422031,0.420675,0.424787,0.4162,0.422937,0.417433,0.425137,0.420758,0.420882,0.415703,0.431451,0.419044,0.420954,0.42057,0.426921,0.413634,0.427274,0.422064,0.420372,0.416428,0.425656,0.418898,0.423542,0.418136,0.421121,0.416988,0.42242] }, "kmer_count": { "AAAAA":2180941, "AAAAT":1409689, "AAAAC":1211554, "AAAAG":772759, "AAATA":1464861, "AAATT":882145, "AAATC":775059, "AAATG":1269201, "AAACA":1741499, "AAACT":921953, "AAACC":899821, "AAACG":314501, 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"CCCCG":248453, "CCCGA":153820, "CCCGT":216550, "CCCGC":187031, "CCCGG":147472, "CCGAA":140689, "CCGAT":193951, "CCGAC":197674, "CCGAG":165625, "CCGTA":190458, "CCGTT":232543, "CCGTC":265482, "CCGTG":194687, "CCGCA":194165, "CCGCT":248482, "CCGCC":229662, "CCGCG":56404, "CCGGA":131201, "CCGGT":154814, "CCGGC":146614, "CCGGG":119417, "CGAAA":185762, "CGAAT":139145, "CGAAC":146185, "CGAAG":122729, "CGATA":173686, "CGATT":189185, "CGATC":158277, "CGATG":189332, "CGACA":334044, "CGACT":190809, "CGACC":228086, "CGACG":101231, "CGAGA":201826, "CGAGT":128791, "CGAGC":130087, "CGAGG":145430, "CGTAA":177313, "CGTAT":171829, "CGTAC":169714, "CGTAG":165160, "CGTTA":245076, "CGTTT":356491, "CGTTC":242372, "CGTTG":233814, "CGTCA":278733, "CGTCT":335312, "CGTCC":224828, "CGTCG":82919, "CGTGA":162616, "CGTGT":266059, "CGTGC":166627, "CGTGG":167167, "CGCAA":209051, "CGCAT":167042, "CGCAC":229838, "CGCAG":188670, "CGCTA":217459, "CGCTT":189150, "CGCTC":435879, "CGCTG":292126, "CGCCA":243485, "CGCCT":201053, "CGCCC":230436, "CGCCG":79409, "CGCGA":47454, "CGCGT":53383, "CGCGC":81070, "CGCGG":45838, "CGGAA":203728, "CGGAT":121748, "CGGAC":143928, "CGGAG":173205, "CGGTA":159607, "CGGTT":156560, "CGGTC":159766, "CGGTG":183548, "CGGCA":175733, "CGGCT":174386, "CGGCC":165127, "CGGCG":75700, "CGGGA":122817, "CGGGT":92832, "CGGGC":95530, "CGGGG":103167, "GAAAA":847994, "GAAAT":811333, "GAAAC":661978, "GAAAG":519690, "GAATA":579830, "GAATT":556003, "GAATC":389859, "GAATG":591794, "GAACA":805541, "GAACT":476749, "GAACC":443588, "GAACG":206121, "GAAGA":611766, "GAAGT":496615, "GAAGC":381667, "GAAGG":391236, "GATAA":453627, "GATAT":582283, "GATAC":405929, "GATAG":292365, "GATTA":482338, "GATTT":780836, "GATTC":426647, "GATTG":448633, "GATCA":524863, "GATCT":509201, "GATCC":365987, "GATCG":199933, "GATGA":622316, "GATGT":692030, "GATGC":420977, "GATGG":425504, "GACAA":828984, "GACAT":851522, "GACAC":906878, "GACAG":739412, "GACTA":500847, "GACTT":521821, "GACTC":529085, "GACTG":660868, "GACCA":733442, "GACCT":502683, "GACCC":514423, "GACCG":147209, "GACGA":224977, "GACGT":197647, "GACGC":147153, "GACGG":159860, "GAGAA":639229, "GAGAT":503320, "GAGAC":560668, "GAGAG":751397, "GAGTA":361177, "GAGTT":424456, "GAGTC":340534, "GAGTG":414694, "GAGCA":437803, "GAGCT":442314, "GAGCC":358289, "GAGCG":164039, "GAGGA":540589, "GAGGT":370454, "GAGGC":324298, "GAGGG":282094, "GTAAA":765070, "GTAAT":675835, "GTAAC":541177, "GTAAG":299720, "GTATA":704934, "GTATT":855452, "GTATC":506527, "GTATG":528997, "GTACA":832620, "GTACT":650652, "GTACC":526697, "GTACG":142216, "GTAGA":458995, "GTAGT":461032, "GTAGC":388673, "GTAGG":301324, "GTTAA":620932, "GTTAT":704476, "GTTAC":599831, "GTTAG":400928, "GTTTA":815608, "GTTTT":1319977, "GTTTC":777179, "GTTTG":805750, "GTTCA":763516, "GTTCT":849572, "GTTCC":635968, "GTTCG":129186, "GTTGA":617422, "GTTGT":837232, "GTTGC":552685, "GTTGG":393250, "GTCAA":656709, "GTCAT":829489, "GTCAC":656119, "GTCAG":614901, "GTCTA":642268, "GTCTT":728281, "GTCTC":1269391, "GTCTG":957948, "GTCCA":655768, "GTCCT":749547, "GTCCC":546122, "GTCCG":146825, "GTCGA":134138, "GTCGT":184288, "GTCGC":134848, "GTCGG":114592, "GTGAA":591812, "GTGAT":520988, "GTGAC":483393, "GTGAG":362643, "GTGTA":664737, "GTGTT":1003725, "GTGTC":678555, "GTGTG":1550661, "GTGCA":515883, "GTGCT":511949, "GTGCC":373367, "GTGCG":137305, "GTGGA":500170, "GTGGT":471118, "GTGGC":360521, "GTGGG":273438, "GCAAA":568208, "GCAAT":461188, "GCAAC":603774, "GCAAG":372010, "GCATA":424701, "GCATT":658836, "GCATC":474373, "GCATG":460518, "GCACA":744711, "GCACT":518973, "GCACC":473245, "GCACG":152262, "GCAGA":527632, "GCAGT":507749, "GCAGC":677974, "GCAGG":403986, "GCTAA":452091, "GCTAT":509009, "GCTAC":706844, "GCTAG":345645, "GCTTA":298639, "GCTTT":747285, "GCTTC":591345, "GCTTG":346992, "GCTCA":539169, "GCTCT":1018690, "GCTCC":1198699, "GCTCG":162769, "GCTGA":569339, "GCTGT":885799, "GCTGC":1287065, "GCTGG":532991, "GCCAA":559101, "GCCAT":640093, "GCCAC":612619, "GCCAG":443386, "GCCTA":422189, "GCCTT":564856, "GCCTC":566797, "GCCTG":459512, "GCCCA":521036, "GCCCT":488970, "GCCCC":479824, "GCCCG":118672, "GCCGA":138600, "GCCGT":148505, "GCCGC":148873, "GCCGG":112985, "GCGAA":116793, "GCGAT":112667, "GCGAC":116398, "GCGAG":100835, "GCGTA":100995, "GCGTT":169331, "GCGTC":146442, "GCGTG":145356, "GCGCA":135020, "GCGCT":173509, "GCGCC":122493, "GCGCG":58038, "GCGGA":91973, "GCGGT":117177, "GCGGC":109478, "GCGGG":76059, "GGAAA":641485, "GGAAT":444797, "GGAAC":418855, "GGAAG":416180, "GGATA":336406, "GGATT":423999, "GGATC":310183, "GGATG":408852, "GGACA":702693, "GGACT":406296, "GGACC":340396, "GGACG":148918, "GGAGA":541908, "GGAGT":362293, "GGAGC":328829, "GGAGG":394837, "GGTAA":369923, "GGTAT":391838, "GGTAC":380986, "GGTAG":274046, "GGTTA":372162, "GGTTT":555791, "GGTTC":334756, "GGTTG":356899, "GGTCA":509673, "GGTCT":521958, "GGTCC":316760, "GGTCG":103702, "GGTGA":403256, "GGTGT":533396, "GGTGC":286441, "GGTGG":327102, "GGCAA":371807, "GGCAT":375495, "GGCAC":338476, "GGCAG":394865, "GGCTA":408135, "GGCTT":380256, "GGCTC":364730, "GGCTG":459947, "GGCCA":475240, "GGCCT":426646, "GGCCC":307621, "GGCCG":131385, "GGCGA":112845, "GGCGT":104175, "GGCGC":106530, "GGCGG":108169, "GGGAA":358132, "GGGAT":284081, "GGGAC":268444, "GGGAG":284725, "GGGTA":241227, "GGGTT":280812, "GGGTC":219671, "GGGTG":261232, "GGGCA":260255, "GGGCT":242123, "GGGCC":234352, "GGGCG":75306, "GGGGA":243582, "GGGGT":203478, "GGGGC":162963, "GGGGG":199586 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212411_sample_1703714_S111_L002_R1_001.fastq.gz --in2 lib_212411_sample_1703714_S111_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L002_R2_001.fastp-trim.fq.gz " }