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"GC":[0.682198,0.501975,0.397304,0.453846,0.432237,0.429639,0.329749,0.416848,0.486945,0.339764,0.526904,0.503623,0.411696,0.439975,0.397479,0.436419,0.457645,0.40095,0.450115,0.410811,0.449466,0.406584,0.419637,0.441759,0.409756,0.456985,0.44834,0.402172,0.463412,0.40072,0.445668,0.410748,0.448773,0.445565,0.416481,0.401323,0.447909,0.45321,0.450534,0.399535,0.418946,0.401801,0.414852,0.415204,0.408933,0.447265,0.432861,0.44411,0.451888,0.414528,0.409084,0.400939,0.46153,0.445986,0.450951,0.454135,0.408937,0.443941,0.421996,0.404121,0.451378,0.419669,0.452666,0.45128,0.432296,0.406449,0.456136,0.419763,0.41305,0.409182,0.430479,0.444609,0.452114,0.460935,0.456023,0.451139,0.464041,0.448278,0.4543,0.460668,0.454743,0.450821,0.465046,0.451758,0.461695,0.464284,0.459011,0.455927,0.47124,0.453324,0.461043,0.46503,0.45905,0.456926,0.469269,0.457794,0.46129,0.464594,0.460769,0.455082,0.473004] }, "kmer_count": { "AAAAA":3608002, "AAAAT":2318328, "AAAAC":1619337, "AAAAG":2081744, 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"AGGTT":1192292, "AGGTC":609896, "AGGTG":1421083, "AGGCA":933510, "AGGCT":784059, "AGGCC":502849, "AGGCG":251444, "AGGGA":1941317, "AGGGT":1661496, "AGGGC":594916, "AGGGG":2295655, "TAAAA":2091426, "TAAAT":1622251, "TAAAC":988113, "TAAAG":1228902, "TAATA":1316136, "TAATT":1022839, "TAATC":1267502, "TAATG":1647588, "TAACA":1340607, "TAACT":755599, "TAACC":432480, "TAACG":286219, "TAAGA":999377, "TAAGT":731250, "TAAGC":364611, "TAAGG":906367, "TATAA":1244659, "TATAT":1880966, "TATAC":877061, "TATAG":1506766, "TATTA":1259563, "TATTT":1715888, "TATTC":711008, "TATTG":1269585, "TATCA":782943, "TATCT":635413, "TATCC":375645, "TATCG":223147, "TATGA":1076360, "TATGT":1794486, "TATGC":1070006, "TATGG":1172524, "TACAA":1107158, "TACAT":1329615, "TACAC":798871, "TACAG":1688379, "TACTA":675468, "TACTT":751485, "TACTC":418453, "TACTG":1180991, "TACCA":625923, "TACCT":558336, "TACCC":269339, "TACCG":177592, "TACGA":214068, "TACGT":265680, "TACGC":116781, "TACGG":239484, "TAGAA":1326267, 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"GC":[0.409892,0.431986,0.41665,0.424149,0.427134,0.423429,0.422868,0.436023,0.415868,0.425469,0.43167,0.422316,0.417749,0.438535,0.416582,0.420022,0.427061,0.422868,0.419821,0.432815,0.416904,0.421399,0.427358,0.424432,0.415237,0.435494,0.417415,0.430907,0.431504,0.423731,0.421101,0.438438,0.416823,0.42498,0.429559,0.424054,0.41482,0.435548,0.418144,0.422839,0.427044,0.420453,0.415815,0.432702,0.415922,0.423095,0.427548,0.423803,0.422688,0.438177,0.417019,0.427146,0.430988,0.424013,0.416541,0.435861,0.417169,0.421421,0.431224,0.424566,0.418913,0.432473,0.414523,0.420417,0.427685,0.419932,0.416034,0.431849,0.416679,0.427129,0.429801,0.422798,0.419196,0.436301,0.414547,0.423077,0.428196,0.42063,0.41828,0.432219,0.417822,0.421062,0.424403,0.419052,0.411308,0.431234] }, "kmer_count": { "AAAAA":2865593, "AAAAT":1905575, "AAAAC":1334812, "AAAAG":1434647, "AAATA":2026910, "AAATT":993576, "AAATC":765376, "AAATG":1645317, "AAACA":1981867, "AAACT":841652, "AAACC":553924, "AAACG":362183, 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"TAAAC":959912, "TAAAG":677985, "TAATA":1070318, "TAATT":969239, "TAATC":586574, "TAATG":872977, "TAACA":1373243, "TAACT":907510, "TAACC":1232635, "TAACG":215341, "TAAGA":479063, "TAAGT":453820, "TAAGC":296999, "TAAGG":288920, "TATAA":978527, "TATAT":1799605, "TATAC":944946, "TATAG":739126, "TATTA":1092799, "TATTT":1954533, "TATTC":959182, "TATTG":869136, "TATCA":1210067, "TATCT":1259970, "TATCC":793462, "TATCG":222809, "TATGA":682355, "TATGT":1010986, "TATGC":519272, "TATGG":474661, "TACAA":1392841, "TACAT":1478387, "TACAC":1391972, "TACAG":1140109, "TACTA":1824524, "TACTT":961690, "TACTC":955516, "TACTG":1226371, "TACCA":1345993, "TACCT":1101098, "TACCC":933677, "TACCG":215730, "TACGA":247553, "TACGT":234436, "TACGC":154140, "TACGG":145055, "TAGAA":663980, "TAGAT":533124, "TAGAC":542050, "TAGAG":420379, "TAGTA":566677, "TAGTT":706683, "TAGTC":588058, "TAGTG":522312, "TAGCA":548099, "TAGCT":697114, "TAGCC":546799, "TAGCG":120849, "TAGGA":400016, "TAGGT":348313, "TAGGC":376164, 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"TTGCG":151802, "TTGGA":628933, "TTGGT":604696, "TTGGC":470255, "TTGGG":350192, "TCAAA":1140709, "TCAAT":1097749, "TCAAC":1085169, "TCAAG":662565, "TCATA":889972, "TCATT":1595665, "TCATC":1130914, "TCATG":800654, "TCACA":1473701, "TCACT":1373024, "TCACC":982553, "TCACG":221694, "TCAGA":860003, "TCAGT":977513, "TCAGC":700076, "TCAGG":498538, "TCTAA":890071, "TCTAT":1539804, "TCTAC":1485391, "TCTAG":530523, "TCTTA":792491, "TCTTT":1635686, "TCTTC":1348391, "TCTTG":649028, "TCTCA":1442128, "TCTCT":7233984, "TCTCC":1925608, "TCTCG":364837, "TCTGA":989491, "TCTGT":2246718, "TCTGC":859228, "TCTGG":636210, "TCCAA":1119722, "TCCAT":1200553, "TCCAC":1187847, "TCCAG":866698, "TCCTA":899680, "TCCTT":1114483, "TCCTC":1855388, "TCCTG":977475, "TCCCA":1276987, "TCCCT":1378619, "TCCCC":1020173, "TCCCG":198248, "TCCGA":200106, "TCCGT":264144, "TCCGC":170878, "TCCGG":128972, "TCGAA":160642, "TCGAT":190053, "TCGAC":203740, "TCGAG":137011, "TCGTA":175599, "TCGTT":294845, "TCGTC":268013, "TCGTG":177804, "TCGCA":179021, "TCGCT":437021, "TCGCC":187631, "TCGCG":53348, "TCGGA":212602, "TCGGT":186732, "TCGGC":146191, "TCGGG":110979, "TGAAA":1039281, "TGAAT":846383, "TGAAC":689485, "TGAAG":705724, "TGATA":672546, "TGATT":924680, "TGATC":586547, "TGATG":856050, "TGACA":1135016, "TGACT":946418, "TGACC":709491, "TGACG":257423, "TGAGA":655238, "TGAGT":560805, "TGAGC":462719, "TGAGG":440560, "TGTAA":1079715, "TGTAT":1283681, "TGTAC":920828, "TGTAG":728671, "TGTTA":1073307, "TGTTT":1947247, "TGTTC":1252432, "TGTTG":1114681, "TGTCA":1137097, "TGTCT":1990192, "TGTCC":1012610, "TGTCG":229964, "TGTGA":797704, "TGTGT":2251001, "TGTGC":620201, "TGTGG":649062, "TGCAA":711422, "TGCAT":812910, "TGCAC":722962, "TGCAG":825903, "TGCTA":718737, "TGCTT":830854, "TGCTC":1462328, "TGCTG":985082, "TGCCA":790328, "TGCCT":744206, "TGCCC":550006, "TGCCG":181130, "TGCGA":137362, "TGCGT":207882, "TGCGC":152592, "TGCGG":108746, "TGGAA":739828, "TGGAT":586223, "TGGAC":659968, "TGGAG":591835, "TGGTA":540660, "TGGTT":682391, "TGGTC":656027, "TGGTG":641982, "TGGCA":587892, "TGGCT":629905, "TGGCC":488314, "TGGCG":137723, "TGGGA":434811, "TGGGT":393053, "TGGGC":293255, "TGGGG":281118, "CAAAA":1270926, "CAAAT":1029785, "CAAAC":1070494, "CAAAG":714515, "CAATA":1056310, "CAATT":810289, "CAATC":665461, "CAATG":911443, "CAACA":3519615, "CAACT":1364987, "CAACC":1954338, "CAACG":319899, "CAAGA":665320, "CAAGT":601920, "CAAGC":509900, "CAAGG":513331, "CATAA":914694, "CATAT":1091480, "CATAC":1021052, "CATAG":621598, "CATTA":1371208, "CATTT":1629409, "CATTC":996218, "CATTG":933993, "CATCA":1412447, "CATCT":1410338, "CATCC":981205, "CATCG":307485, "CATGA":758317, "CATGT":1181656, "CATGC":631055, "CATGG":611472, "CACAA":1897127, "CACAT":1572293, "CACAC":4866646, "CACAG":2058858, "CACTA":1558124, "CACTT":922504, "CACTC":1309673, "CACTG":1347987, "CACCA":1573611, "CACCT":1109748, "CACCC":914372, "CACCG":291238, "CACGA":202627, "CACGT":298943, "CACGC":323559, "CACGG":203748, "CAGAA":872031, "CAGAT":772504, "CAGAC":960246, "CAGAG":844332, "CAGTA":984751, "CAGTT":969646, "CAGTC":907277, "CAGTG":827142, "CAGCA":1064987, "CAGCT":1738823, "CAGCC":769092, "CAGCG":227137, "CAGGA":681254, "CAGGT":644375, "CAGGC":495631, "CAGGG":407416, "CTAAA":874085, "CTAAT":693981, "CTAAC":1062992, "CTAAG":313295, "CTATA":1218059, "CTATT":995170, "CTATC":1143197, "CTATG":625134, "CTACA":1776343, "CTACT":2344549, "CTACC":1636234, "CTACG":267008, "CTAGA":477655, "CTAGT":615138, "CTAGC":492746, "CTAGG":340440, "CTTAA":617513, "CTTAT":742326, "CTTAC":659668, "CTTAG":367370, "CTTTA":967822, "CTTTT":1330893, "CTTTC":1365121, "CTTTG":892961, "CTTCA":1212223, "CTTCT":1539986, "CTTCC":1054887, "CTTCG":199319, "CTTGA":558467, "CTTGT":725831, "CTTGC":436455, "CTTGG":360773, "CTCAA":976655, "CTCAT":1088140, "CTCAC":1354237, "CTCAG":816624, "CTCTA":1618845, "CTCTT":1633070, "CTCTC":6630517, "CTCTG":1829896, "CTCCA":1660900, "CTCCT":1975889, "CTCCC":1715943, "CTCCG":262502, "CTCGA":154762, "CTCGT":253425, "CTCGC":370522, "CTCGG":151801, "CTGAA":861267, "CTGAT":810821, "CTGAC":1009409, "CTGAG":601205, "CTGTA":1329785, "CTGTT":1463528, "CTGTC":1934169, "CTGTG":1038268, "CTGCA":1028665, "CTGCT":1803768, "CTGCC":880809, "CTGCG":180333, "CTGGA":754194, "CTGGT":839499, "CTGGC":513398, "CTGGG":401360, "CCAAA":973698, "CCAAT":772138, "CCAAC":1340076, "CCAAG":566396, "CCATA":927053, "CCATT":1013968, "CCATC":1190255, "CCATG":779488, "CCACA":2807234, "CCACT":1490052, "CCACC":1207202, "CCACG":291526, "CCAGA":814456, "CCAGT":828207, "CCAGC":732601, "CCAGG":569976, "CCTAA":715231, "CCTAT":674577, "CCTAC":1447503, "CCTAG":465411, "CCTTA":699203, "CCTTT":1063992, "CCTTC":1085152, "CCTTG":551679, "CCTCA":1205670, "CCTCT":2122571, "CCTCC":1539530, "CCTCG":233215, "CCTGA":723196, "CCTGT":1121076, "CCTGC":763935, "CCTGG":617455, "CCCAA":948404, "CCCAT":818446, "CCCAC":1324343, "CCCAG":791077, "CCCTA":1195291, "CCCTT":846441, "CCCTC":1518582, "CCCTG":907693, "CCCCA":1134783, "CCCCT":1293104, "CCCCC":897316, "CCCCG":248022, "CCCGA":152552, "CCCGT":217278, "CCCGC":187187, "CCCGG":146573, "CCGAA":141084, "CCGAT":193331, "CCGAC":196258, "CCGAG":165948, "CCGTA":189392, "CCGTT":233216, "CCGTC":266783, "CCGTG":195581, "CCGCA":193851, "CCGCT":251907, "CCGCC":230364, "CCGCG":56607, "CCGGA":131468, "CCGGT":153959, "CCGGC":146655, "CCGGG":119971, "CGAAA":184951, "CGAAT":140264, "CGAAC":147079, "CGAAG":122950, "CGATA":174407, "CGATT":190577, "CGATC":158329, "CGATG":190628, "CGACA":333454, "CGACT":190844, "CGACC":229520, "CGACG":101385, "CGAGA":203789, "CGAGT":128815, "CGAGC":130931, "CGAGG":146177, "CGTAA":177702, "CGTAT":171179, "CGTAC":169765, "CGTAG":165879, "CGTTA":245497, "CGTTT":355992, "CGTTC":244923, "CGTTG":234454, "CGTCA":279584, "CGTCT":337134, "CGTCC":224975, "CGTCG":84340, "CGTGA":162741, "CGTGT":267604, "CGTGC":167109, "CGTGG":166704, "CGCAA":208040, "CGCAT":167405, "CGCAC":230009, "CGCAG":188055, "CGCTA":216656, "CGCTT":189635, "CGCTC":443940, "CGCTG":294525, "CGCCA":242833, "CGCCT":201784, "CGCCC":230252, "CGCCG":80148, "CGCGA":48189, "CGCGT":52552, "CGCGC":81168, "CGCGG":46261, "CGGAA":204233, "CGGAT":121542, "CGGAC":144469, "CGGAG":174249, "CGGTA":159054, "CGGTT":156199, "CGGTC":160776, "CGGTG":185093, "CGGCA":177415, "CGGCT":175181, "CGGCC":166009, "CGGCG":75426, "CGGGA":123627, "CGGGT":93469, "CGGGC":94648, "CGGGG":103545, "GAAAA":850036, "GAAAT":810582, "GAAAC":664167, "GAAAG":521709, "GAATA":581262, "GAATT":556617, "GAATC":391397, "GAATG":592631, "GAACA":807241, "GAACT":476042, "GAACC":444185, "GAACG":207395, "GAAGA":611690, "GAAGT":497428, "GAAGC":382518, "GAAGG":394306, "GATAA":454020, "GATAT":583025, "GATAC":406586, "GATAG":291949, "GATTA":484023, "GATTT":781470, "GATTC":427679, "GATTG":450078, "GATCA":527325, "GATCT":509776, "GATCC":367561, "GATCG":200268, "GATGA":625053, "GATGT":693692, "GATGC":419920, "GATGG":427127, "GACAA":829850, "GACAT":854232, "GACAC":908476, "GACAG":739840, "GACTA":503220, "GACTT":523895, "GACTC":533002, "GACTG":661358, "GACCA":736716, "GACCT":506310, "GACCC":516078, "GACCG":146938, "GACGA":225901, "GACGT":198003, "GACGC":149243, "GACGG":160334, "GAGAA":639445, "GAGAT":504884, "GAGAC":564536, "GAGAG":752471, "GAGTA":361102, "GAGTT":424372, "GAGTC":341499, "GAGTG":413686, "GAGCA":439005, "GAGCT":444812, "GAGCC":360321, "GAGCG":164670, "GAGGA":544116, "GAGGT":372442, "GAGGC":325058, "GAGGG":282015, "GTAAA":766882, "GTAAT":676478, "GTAAC":542312, "GTAAG":299653, "GTATA":704336, "GTATT":860371, "GTATC":508704, "GTATG":529718, "GTACA":836070, "GTACT":653835, "GTACC":528886, "GTACG":142649, "GTAGA":461702, "GTAGT":464698, "GTAGC":389347, "GTAGG":302778, "GTTAA":621257, "GTTAT":706338, "GTTAC":600962, "GTTAG":401530, "GTTTA":818112, "GTTTT":1321576, "GTTTC":777972, "GTTTG":807750, "GTTCA":765398, "GTTCT":855934, "GTTCC":635409, "GTTCG":128576, "GTTGA":619509, "GTTGT":836570, "GTTGC":552153, "GTTGG":392164, "GTCAA":659184, "GTCAT":829947, "GTCAC":657290, "GTCAG":616793, "GTCTA":643185, "GTCTT":730159, "GTCTC":1276609, "GTCTG":959699, "GTCCA":658599, "GTCCT":748957, "GTCCC":546943, "GTCCG":147321, "GTCGA":135397, "GTCGT":185741, "GTCGC":136046, "GTCGG":114791, "GTGAA":590329, "GTGAT":521693, "GTGAC":485774, "GTGAG":362576, "GTGTA":667161, "GTGTT":1005446, "GTGTC":680669, "GTGTG":1543748, "GTGCA":517561, "GTGCT":509955, "GTGCC":372878, "GTGCG":138035, "GTGGA":502765, "GTGGT":471577, "GTGGC":359238, "GTGGG":274780, "GCAAA":571156, "GCAAT":461023, "GCAAC":605686, "GCAAG":373958, "GCATA":425804, "GCATT":658924, "GCATC":476050, "GCATG":462061, "GCACA":746054, "GCACT":519436, "GCACC":475067, "GCACG":153109, "GCAGA":528964, "GCAGT":510259, "GCAGC":681578, "GCAGG":405311, "GCTAA":453802, "GCTAT":511823, "GCTAC":706077, "GCTAG":344984, "GCTTA":300569, "GCTTT":746853, "GCTTC":592458, "GCTTG":347418, "GCTCA":541277, "GCTCT":1025457, "GCTCC":1208432, "GCTCG":164827, "GCTGA":569503, "GCTGT":887887, "GCTGC":1291940, "GCTGG":533324, "GCCAA":558422, "GCCAT":641225, "GCCAC":613575, "GCCAG":443405, "GCCTA":423848, "GCCTT":566810, "GCCTC":567896, "GCCTG":460551, "GCCCA":520140, "GCCCT":489489, "GCCCC":480689, "GCCCG":117890, "GCCGA":138338, "GCCGT":148736, "GCCGC":149862, "GCCGG":112081, "GCGAA":116365, "GCGAT":113171, "GCGAC":117179, "GCGAG":101206, "GCGTA":100837, "GCGTT":170325, "GCGTC":146507, "GCGTG":145478, "GCGCA":134973, "GCGCT":173379, "GCGCC":122665, "GCGCG":57850, "GCGGA":92851, "GCGGT":117882, "GCGGC":109961, "GCGGG":77005, "GGAAA":645207, "GGAAT":444438, "GGAAC":419982, "GGAAG":416470, "GGATA":336631, "GGATT":424671, "GGATC":312083, "GGATG":408559, "GGACA":705329, "GGACT":407119, "GGACC":341931, "GGACG":150643, "GGAGA":542911, "GGAGT":362413, "GGAGC":331109, "GGAGG":397162, "GGTAA":368131, "GGTAT":392218, "GGTAC":383661, "GGTAG":275170, "GGTTA":373684, "GGTTT":556369, "GGTTC":334527, "GGTTG":356862, "GGTCA":508828, "GGTCT":522600, "GGTCC":317233, "GGTCG":104574, "GGTGA":404419, "GGTGT":534311, "GGTGC":287283, "GGTGG":329943, "GGCAA":371483, "GGCAT":376509, "GGCAC":338725, "GGCAG":395089, "GGCTA":405557, "GGCTT":380659, "GGCTC":369007, "GGCTG":459957, "GGCCA":476643, "GGCCT":426688, "GGCCC":307026, "GGCCG":131852, "GGCGA":112511, "GGCGT":103347, "GGCGC":106330, "GGCGG":108607, "GGGAA":358259, "GGGAT":284324, "GGGAC":269107, "GGGAG":286417, "GGGTA":241331, "GGGTT":281784, "GGGTC":218194, "GGGTG":261156, "GGGCA":258922, "GGGCT":242085, "GGGCC":235424, "GGGCG":74987, "GGGGA":245000, "GGGGT":203188, "GGGGC":163627, "GGGGG":198284 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212411_sample_1703714_S111_L001_R1_001.fastq.gz --in2 lib_212411_sample_1703714_S111_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212411_sample_1703714_S111_L001_R2_001.fastp-trim.fq.gz " }