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"GC":[0.682562,0.491863,0.394852,0.454989,0.421036,0.430691,0.330257,0.405307,0.493508,0.337907,0.521376,0.505937,0.411987,0.435081,0.40176,0.443046,0.454688,0.401762,0.455415,0.399961,0.455205,0.40146,0.409133,0.444142,0.409665,0.448382,0.451844,0.404036,0.455459,0.400787,0.452219,0.401458,0.451579,0.448231,0.410222,0.447753,0.453329,0.404688,0.45421,0.445482,0.411779,0.445075,0.410422,0.403309,0.407379,0.448477,0.424038,0.444449,0.455269,0.445343,0.432812,0.405807,0.446281,0.446794,0.453704,0.448779,0.45134,0.448542,0.451444,0.425914,0.454257,0.439335,0.454076,0.448919,0.454486,0.428279,0.456151,0.432245,0.429906,0.421072,0.43024,0.440791,0.454517,0.451859,0.457774,0.453142,0.459996,0.452432,0.461127,0.454974,0.460018,0.453868,0.459704,0.453851,0.460293,0.455886,0.46111,0.457351,0.465171,0.456707,0.465904,0.459994,0.463589,0.460668,0.46619,0.461783,0.467515,0.463901,0.467518,0.463771,0.473202] }, "kmer_count": { "AAAAA":3738024, "AAAAT":2458080, "AAAAC":1737928, "AAAAG":2037731, 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"ACGCT":234004, "ACGCC":141204, "ACGCG":77004, "ACGGA":392684, "ACGGT":317034, "ACGGC":193753, "ACGGG":324717, "AGAAA":3062611, "AGAAT":1536253, "AGAAC":1268806, "AGAAG":2242539, "AGATA":1870538, "AGATT":1011219, "AGATC":2135659, "AGATG":1955968, "AGACA":3034014, "AGACT":1050371, "AGACC":593098, "AGACG":470052, "AGAGA":13162327, "AGAGT":2011898, "AGAGC":2968098, "AGAGG":3834206, "AGTAA":1458618, "AGTAT":1349299, "AGTAC":822248, "AGTAG":2396760, "AGTTA":1153525, "AGTTT":1155121, "AGTTC":616722, "AGTTG":1067373, "AGTCA":2230966, "AGTCT":902545, "AGTCC":528556, "AGTCG":240103, "AGTGA":2060905, "AGTGT":2316643, "AGTGC":677213, "AGTGG":1741528, "AGCAA":1014451, "AGCAT":1016016, "AGCAC":2219227, "AGCAG":1619957, "AGCTA":866932, "AGCTT":697564, "AGCTC":1379197, "AGCTG":1142323, "AGCCA":811528, "AGCCT":717597, "AGCCC":310896, "AGCCG":241531, "AGCGA":632770, "AGCGT":358874, "AGCGC":221721, "AGCGG":311789, "AGGAA":1927202, "AGGAT":1277976, "AGGAC":1047037, "AGGAG":3231668, "AGGTA":1489075, "AGGTT":1112465, "AGGTC":649979, "AGGTG":1525666, "AGGCA":1038841, "AGGCT":905082, "AGGCC":550373, "AGGCG":265204, "AGGGA":2477175, "AGGGT":1693076, "AGGGC":703394, "AGGGG":2323865, "TAAAA":2173977, "TAAAT":1757282, "TAAAC":1090404, "TAAAG":1455907, "TAATA":1467272, "TAATT":1117491, "TAATC":635185, "TAATG":1666890, "TAACA":1506197, "TAACT":833331, "TAACC":492695, "TAACG":319951, "TAAGA":1013125, "TAAGT":784730, "TAAGC":406680, "TAAGG":948375, "TATAA":1338686, "TATAT":2082599, "TATAC":1039437, "TATAG":1586538, "TATTA":1318721, "TATTT":1884081, "TATTC":790358, "TATTG":1257548, "TATCA":908058, "TATCT":741133, "TATCC":402674, "TATCG":232331, "TATGA":1194778, "TATGT":1861299, "TATGC":592761, "TATGG":1214884, "TACAA":1195911, "TACAT":1430046, "TACAC":915230, "TACAG":2020544, "TACTA":695863, "TACTT":792696, "TACTC":468966, "TACTG":1314286, "TACCA":642578, "TACCT":615482, "TACCC":306263, "TACCG":210535, "TACGA":229307, "TACGT":290460, "TACGC":129557, "TACGG":255815, "TAGAA":1458533, 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"CACAC":3446745, "CACAG":1436414, "CACTA":702766, "CACTT":713176, "CACTC":515612, "CACTG":1050360, "CACCA":767261, "CACCT":558254, "CACCC":332440, "CACCG":227167, "CACGA":1161529, "CACGT":1694864, "CACGC":202761, "CACGG":253149, "CAGAA":1613763, "CAGAT":1600379, "CAGAC":1343515, "CAGAG":2950542, "CAGTA":1788305, "CAGTT":1044241, "CAGTC":1815503, "CAGTG":1701131, "CAGCA":1229504, "CAGCT":963289, "CAGCC":583070, "CAGCG":358466, "CAGGA":1333703, "CAGGT":1154919, "CAGGC":608929, "CAGGG":1312662, "CTAAA":955745, "CTAAT":693091, "CTAAC":550000, "CTAAG":455703, "CTATA":1051081, "CTATT":792361, "CTATC":386331, "CTATG":780897, "CTACA":976452, "CTACT":619164, "CTACC":361659, "CTACG":210511, "CTAGA":756402, "CTAGT":826163, "CTAGC":464047, "CTAGG":581890, "CTTAA":593908, "CTTAT":581401, "CTTAC":388353, "CTTAG":370468, "CTTTA":872847, "CTTTT":986997, "CTTTC":639535, "CTTTG":869506, "CTTCA":821708, "CTTCT":722303, "CTTCC":452553, "CTTCG":152148, "CTTGA":766626, "CTTGT":817804, "CTTGC":437339, 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"GC":[0.424155,0.426559,0.418729,0.426624,0.419775,0.428557,0.424246,0.427253,0.418885,0.426219,0.421372,0.423174,0.422425,0.427205,0.418071,0.425228,0.417578,0.424072,0.420746,0.425192,0.418962,0.426953,0.419936,0.425171,0.421056,0.426551,0.418029,0.427731,0.419848,0.424231,0.421577,0.424795,0.419546,0.42828,0.420257,0.424167,0.420168,0.424941,0.418456,0.425644,0.41998,0.42318,0.418709,0.424978,0.417325,0.425332,0.417643,0.422061,0.419591,0.423773,0.417059,0.424377,0.417494,0.421715,0.419995,0.424629,0.416221,0.422999,0.416068,0.420611,0.418904,0.423088,0.415363,0.423312,0.41645,0.422441,0.416645,0.421718,0.414682,0.421467,0.416231,0.419702,0.417041,0.420875,0.414137,0.424508,0.416799,0.419944,0.416887,0.42049,0.416609,0.422972,0.415496,0.419606,0.416928,0.420833] }, "kmer_count": { "AAAAA":2384844, "AAAAT":1558058, "AAAAC":1180933, "AAAAG":869950, "AAATA":1627582, "AAATT":936548, "AAATC":844400, "AAATG":1356815, "AAACA":1788702, "AAACT":980012, "AAACC":866253, "AAACG":334170, 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"CCCCC":981243, "CCCCG":262020, "CCCGA":153570, "CCCGT":238886, "CCCGC":198944, "CCCGG":160628, "CCGAA":143214, "CCGAT":196823, "CCGAC":195642, "CCGAG":168814, "CCGTA":205761, "CCGTT":260745, "CCGTC":298297, "CCGTG":206919, "CCGCA":184556, "CCGCT":244613, "CCGCC":252494, "CCGCG":59910, "CCGGA":141950, "CCGGT":183600, "CCGGC":150731, "CCGGG":137182, "CGAAA":186611, "CGAAT":157648, "CGAAC":151450, "CGAAG":123229, "CGATA":188465, "CGATT":198135, "CGATC":168210, "CGATG":203289, "CGACA":267461, "CGACT":201356, "CGACC":215273, "CGACG":89556, "CGAGA":209272, "CGAGT":138461, "CGAGC":134899, "CGAGG":150121, "CGTAA":181919, "CGTAT":195735, "CGTAC":187708, "CGTAG":178213, "CGTTA":274622, "CGTTT":393939, "CGTTC":283336, "CGTTG":254104, "CGTCA":298555, "CGTCT":368396, "CGTCC":246003, "CGTCG":83422, "CGTGA":183573, "CGTGT":303518, "CGTGC":180687, "CGTGG":176540, "CGCAA":192643, "CGCAT":183716, "CGCAC":252203, "CGCAG":200467, "CGCTA":219907, "CGCTT":203308, "CGCTC":469305, "CGCTG":301504, "CGCCA":247619, "CGCCT":217241, "CGCCC":254443, "CGCCG":84050, "CGCGA":48092, "CGCGT":61891, "CGCGC":88685, "CGCGG":50609, "CGGAA":203912, "CGGAT":131122, "CGGAC":155632, "CGGAG":182410, "CGGTA":185065, "CGGTT":170832, "CGGTC":178524, "CGGTG":193681, "CGGCA":175460, "CGGCT":185610, "CGGCC":176230, "CGGCG":78860, "CGGGA":137135, "CGGGT":101709, "CGGGC":107783, "CGGGG":114945, "GAAAA":947196, "GAAAT":871147, "GAAAC":723169, "GAAAG":558562, "GAATA":665293, "GAATT":600813, "GAATC":432379, "GAATG":651465, "GAACA":873224, "GAACT":518436, "GAACC":473803, "GAACG":214455, "GAAGA":641120, "GAAGT":525007, "GAAGC":384556, "GAAGG":412984, "GATAA":512318, "GATAT":641789, "GATAC":454326, "GATAG":342346, "GATTA":535519, "GATTT":850429, "GATTC":455151, "GATTG":504409, "GATCA":548706, "GATCT":550006, "GATCC":371117, "GATCG":191193, "GATGA":668350, "GATGT":759845, "GATGC":434709, "GATGG":459608, "GACAA":764265, "GACAT":891636, "GACAC":900527, "GACAG":842643, "GACTA":584484, "GACTT":559842, "GACTC":570609, "GACTG":729856, "GACCA":760521, "GACCT":538513, "GACCC":538843, "GACCG":149434, "GACGA":218588, "GACGT":213482, "GACGC":154242, "GACGG":167222, "GAGAA":701750, "GAGAT":541830, "GAGAC":604042, "GAGAG":845623, "GAGTA":399376, "GAGTT":470982, "GAGTC":374447, "GAGTG":473339, "GAGCA":490730, "GAGCT":470271, "GAGCC":392364, "GAGCG":168802, "GAGGA":585175, "GAGGT":407100, "GAGGC":349862, "GAGGG":315749, "GTAAA":846920, "GTAAT":726678, "GTAAC":590216, "GTAAG":337017, "GTATA":838987, "GTATT":982192, "GTATC":569112, "GTATG":619714, "GTACA":864916, "GTACT":641423, "GTACC":527777, "GTACG":149609, "GTAGA":555957, "GTAGT":540468, "GTAGC":431639, "GTAGG":336787, "GTTAA":702152, "GTTAT":809569, "GTTAC":651291, "GTTAG":460576, "GTTTA":905789, "GTTTT":1423976, "GTTTC":978443, "GTTTG":898863, "GTTCA":809778, "GTTCT":1035490, "GTTCC":626515, "GTTCG":134299, "GTTGA":679418, "GTTGT":958745, "GTTGC":466057, "GTTGG":435579, "GTCAA":683019, "GTCAT":895681, "GTCAC":768074, "GTCAG":705464, "GTCTA":684206, "GTCTT":825304, "GTCTC":1488097, "GTCTG":1141081, "GTCCA":707137, "GTCCT":825255, "GTCCC":645552, "GTCCG":139863, "GTCGA":136048, "GTCGT":204265, "GTCGC":151710, "GTCGG":126777, "GTGAA":639757, "GTGAT":564401, "GTGAC":517974, "GTGAG":417349, "GTGTA":764659, "GTGTT":1128139, "GTGTC":751482, "GTGTG":1638368, "GTGCA":577370, "GTGCT":556622, "GTGCC":409235, "GTGCG":154222, "GTGGA":529354, "GTGGT":536643, "GTGGC":393490, "GTGGG":316107, "GCAAA":614193, "GCAAT":503364, "GCAAC":501475, "GCAAG":378833, "GCATA":488429, "GCATT":716262, "GCATC":537362, "GCATG":539346, "GCACA":792039, "GCACT":564865, "GCACC":482250, "GCACG":168927, "GCAGA":596852, "GCAGT":570670, "GCAGC":608827, "GCAGG":450149, "GCTAA":488064, "GCTAT":565339, "GCTAC":637893, "GCTAG":396991, "GCTTA":326329, "GCTTT":831650, "GCTTC":578771, "GCTTG":395728, "GCTCA":568837, "GCTCT":1030713, "GCTCC":569554, "GCTCG":160726, "GCTGA":591633, "GCTGT":928374, "GCTGC":654393, "GCTGG":459538, "GCCAA":581556, "GCCAT":697641, "GCCAC":593936, "GCCAG":508226, "GCCTA":461241, "GCCTT":602810, "GCCTC":667425, "GCCTG":517299, "GCCCA":541403, "GCCCT":571120, "GCCCC":479762, "GCCCG":125644, "GCCGA":146398, "GCCGT":163202, "GCCGC":157338, "GCCGG":126279, "GCGAA":122452, "GCGAT":118042, "GCGAC":124329, "GCGAG":113853, "GCGTA":110277, "GCGTT":195546, "GCGTC":156221, "GCGTG":170639, "GCGCA":150706, "GCGCT":185128, "GCGCC":130781, "GCGCG":62994, "GCGGA":97697, "GCGGT":130340, "GCGGC":111783, "GCGGG":87461, "GGAAA":676773, "GGAAT":500292, "GGAAC":433994, "GGAAG":444689, "GGATA":354182, "GGATT":463485, "GGATC":331596, "GGATG":430863, "GGACA":664583, "GGACT":445706, "GGACC":363146, "GGACG":150085, "GGAGA":588441, "GGAGT":388499, "GGAGC":342608, "GGAGG":437420, "GGTAA":420275, "GGTAT":433238, "GGTAC":369218, "GGTAG":309844, "GGTTA":428408, "GGTTT":615232, "GGTTC":344098, "GGTTG":402865, "GGTCA":551838, "GGTCT":502494, "GGTCC":336813, "GGTCG":115572, "GGTGA":417329, "GGTGT":591941, "GGTGC":301365, "GGTGG":363888, "GGCAA":381645, "GGCAT":415729, "GGCAC":354962, "GGCAG":438838, "GGCTA":453959, "GGCTT":420636, "GGCTC":396041, "GGCTG":522655, "GGCCA":511916, "GGCCT":461820, "GGCCC":329574, "GGCCG":134298, "GGCGA":119133, "GGCGT":117252, "GGCGC":116178, "GGCGG":120767, "GGGAA":393858, "GGGAT":317680, "GGGAC":294213, "GGGAG":322300, "GGGTA":274589, "GGGTT":327013, "GGGTC":249584, "GGGTG":303992, "GGGCA":273934, "GGGCT":274173, "GGGCC":263641, "GGGCG":88712, "GGGGA":270936, "GGGGT":240861, "GGGGC":181923, "GGGGG":246856 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212409_sample_1703780_S119_L002_R1_001.fastq.gz --in2 lib_212409_sample_1703780_S119_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L002_R2_001.fastp-trim.fq.gz " }