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"GC":[0.682824,0.49204,0.394531,0.455124,0.421115,0.430853,0.330102,0.405153,0.493661,0.338565,0.521689,0.5067,0.411693,0.4352,0.401981,0.443491,0.454752,0.401513,0.455457,0.399962,0.45583,0.401332,0.409093,0.444839,0.409756,0.448327,0.451817,0.404197,0.455719,0.40076,0.452488,0.401419,0.452037,0.448371,0.410949,0.448199,0.453566,0.404891,0.455022,0.445829,0.411176,0.445124,0.410378,0.403538,0.408074,0.448234,0.423925,0.444781,0.455193,0.445047,0.429499,0.404733,0.445487,0.447026,0.454243,0.448968,0.450712,0.448956,0.450116,0.422868,0.454561,0.437185,0.4545,0.448916,0.45442,0.424803,0.456539,0.430725,0.426621,0.417886,0.427546,0.440477,0.454765,0.452238,0.457832,0.453527,0.460375,0.452937,0.461104,0.455278,0.459861,0.454088,0.459816,0.453556,0.461264,0.456177,0.461424,0.457762,0.465512,0.456697,0.466122,0.460031,0.46375,0.4608,0.466111,0.462105,0.467118,0.463318,0.467548,0.463083,0.472933] }, "kmer_count": { "AAAAA":3728167, "AAAAT":2459655, "AAAAC":1739929, "AAAAG":2047573, 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"AGGTT":1114552, "AGGTC":652042, "AGGTG":1529666, "AGGCA":1047670, "AGGCT":910165, "AGGCC":553953, "AGGCG":265112, "AGGGA":2487507, "AGGGT":1694707, "AGGGC":706286, "AGGGG":2362723, "TAAAA":2179195, "TAAAT":1758153, "TAAAC":1094679, "TAAAG":1472758, "TAATA":1466440, "TAATT":1120553, "TAATC":634813, "TAATG":1675453, "TAACA":1501109, "TAACT":835324, "TAACC":494724, "TAACG":320884, "TAAGA":1013200, "TAAGT":784694, "TAAGC":408514, "TAAGG":959103, "TATAA":1340717, "TATAT":2085980, "TATAC":1043133, "TATAG":1585621, "TATTA":1317059, "TATTT":1884498, "TATTC":791712, "TATTG":1260075, "TATCA":909095, "TATCT":742312, "TATCC":404907, "TATCG":233236, "TATGA":1196241, "TATGT":1868897, "TATGC":593118, "TATGG":1218766, "TACAA":1196632, "TACAT":1433536, "TACAC":916849, "TACAG":2024812, "TACTA":696924, "TACTT":796056, "TACTC":469724, "TACTG":1316639, "TACCA":640342, "TACCT":619559, "TACCC":307837, "TACCG":212194, "TACGA":229154, "TACGT":290871, "TACGC":129427, "TACGG":256730, "TAGAA":1456726, 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"GC":[0.424466,0.426102,0.418877,0.426841,0.419696,0.428642,0.424238,0.427773,0.419081,0.426041,0.421735,0.423383,0.422768,0.42741,0.418489,0.425538,0.418312,0.424196,0.421121,0.424539,0.418903,0.427103,0.420549,0.425366,0.421708,0.426888,0.417921,0.427743,0.420096,0.424589,0.421543,0.424931,0.419429,0.428773,0.420339,0.424174,0.420489,0.424906,0.418805,0.42599,0.419635,0.42387,0.418837,0.424927,0.41721,0.425452,0.417665,0.422072,0.419986,0.423961,0.417109,0.424586,0.417589,0.422161,0.419876,0.42486,0.416367,0.422849,0.416212,0.420363,0.418917,0.423264,0.415082,0.423274,0.416957,0.422641,0.41694,0.421662,0.414645,0.421918,0.416287,0.419647,0.41736,0.421201,0.414219,0.424502,0.416936,0.420438,0.417203,0.421566,0.417027,0.423058,0.416082,0.419757,0.417447,0.421166] }, "kmer_count": { "AAAAA":2374394, "AAAAT":1558748, "AAAAC":1183051, "AAAAG":869698, "AAATA":1628195, "AAATT":937540, "AAATC":846957, "AAATG":1358510, "AAACA":1792080, "AAACT":980548, "AAACC":867959, "AAACG":335066, 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"CCCCC":983424, "CCCCG":262652, "CCCGA":153929, "CCCGT":241051, "CCCGC":197888, "CCCGG":162701, "CCGAA":143727, "CCGAT":197930, "CCGAC":196090, "CCGAG":170022, "CCGTA":207393, "CCGTT":260028, "CCGTC":299098, "CCGTG":207442, "CCGCA":183978, "CCGCT":244988, "CCGCC":253738, "CCGCG":59699, "CCGGA":143239, "CCGGT":184642, "CCGGC":150842, "CCGGG":136802, "CGAAA":187284, "CGAAT":158432, "CGAAC":152174, "CGAAG":123481, "CGATA":189206, "CGATT":198622, "CGATC":170084, "CGATG":203998, "CGACA":268199, "CGACT":202513, "CGACC":217256, "CGACG":91341, "CGAGA":210885, "CGAGT":138180, "CGAGC":136339, "CGAGG":151034, "CGTAA":182695, "CGTAT":196370, "CGTAC":188410, "CGTAG":179471, "CGTTA":274726, "CGTTT":395697, "CGTTC":283551, "CGTTG":254444, "CGTCA":298523, "CGTCT":368986, "CGTCC":247666, "CGTCG":84874, "CGTGA":183566, "CGTGT":304354, "CGTGC":181289, "CGTGG":176579, "CGCAA":193502, "CGCAT":183290, "CGCAC":253011, "CGCAG":200377, "CGCTA":219936, "CGCTT":203802, "CGCTC":473210, "CGCTG":301291, "CGCCA":247999, "CGCCT":217777, "CGCCC":255649, "CGCCG":84523, "CGCGA":47910, "CGCGT":62306, "CGCGC":88393, "CGCGG":50029, "CGGAA":204348, "CGGAT":132040, "CGGAC":156476, "CGGAG":183134, "CGGTA":185825, "CGGTT":170666, "CGGTC":178626, "CGGTG":194778, "CGGCA":177310, "CGGCT":185982, "CGGCC":176836, "CGGCG":79088, "CGGGA":136353, "CGGGT":102071, "CGGGC":108031, "CGGGG":114627, "GAAAA":948965, "GAAAT":871450, "GAAAC":723491, "GAAAG":561583, "GAATA":667560, "GAATT":601835, "GAATC":432953, "GAATG":654138, "GAACA":876040, "GAACT":518074, "GAACC":476593, "GAACG":215662, "GAAGA":645259, "GAAGT":526211, "GAAGC":384381, "GAAGG":415202, "GATAA":512715, "GATAT":643472, "GATAC":454145, "GATAG":343684, "GATTA":535020, "GATTT":853105, "GATTC":456188, "GATTG":505689, "GATCA":549776, "GATCT":552822, "GATCC":373008, "GATCG":192126, "GATGA":670146, "GATGT":761898, "GATGC":435888, "GATGG":460717, "GACAA":766967, "GACAT":894178, "GACAC":904890, "GACAG":844570, "GACTA":587034, "GACTT":561277, "GACTC":574291, "GACTG":730102, "GACCA":762041, "GACCT":541094, "GACCC":542366, "GACCG":149239, "GACGA":220448, "GACGT":215955, "GACGC":154416, "GACGG":168229, "GAGAA":703915, "GAGAT":545648, "GAGAC":607671, "GAGAG":850243, "GAGTA":400964, "GAGTT":470774, "GAGTC":375138, "GAGTG":474823, "GAGCA":491086, "GAGCT":472898, "GAGCC":393166, "GAGCG":169914, "GAGGA":586564, "GAGGT":408054, "GAGGC":351055, "GAGGG":317733, "GTAAA":846208, "GTAAT":723868, "GTAAC":590577, "GTAAG":339052, "GTATA":841664, "GTATT":984138, "GTATC":573812, "GTATG":622717, "GTACA":868488, "GTACT":642458, "GTACC":532118, "GTACG":151021, "GTAGA":557265, "GTAGT":540780, "GTAGC":434308, "GTAGG":337151, "GTTAA":703441, "GTTAT":811063, "GTTAC":650935, "GTTAG":461661, "GTTTA":910849, "GTTTT":1422784, "GTTTC":982993, "GTTTG":899135, "GTTCA":810414, "GTTCT":1039020, "GTTCC":630166, "GTTCG":133907, "GTTGA":681367, "GTTGT":956919, "GTTGC":466929, "GTTGG":436782, "GTCAA":685947, "GTCAT":895490, "GTCAC":769574, "GTCAG":705727, "GTCTA":684988, "GTCTT":827000, "GTCTC":1493014, "GTCTG":1145569, "GTCCA":708964, "GTCCT":828433, "GTCCC":649226, "GTCCG":141123, "GTCGA":138472, "GTCGT":205155, "GTCGC":152317, "GTCGG":128498, "GTGAA":640059, "GTGAT":563968, "GTGAC":519573, "GTGAG":418194, "GTGTA":767378, "GTGTT":1128028, "GTGTC":752263, "GTGTG":1647847, "GTGCA":577871, "GTGCT":559028, "GTGCC":412437, "GTGCG":155980, "GTGGA":531968, "GTGGT":539412, "GTGGC":392349, "GTGGG":314986, "GCAAA":615796, "GCAAT":503290, "GCAAC":503449, "GCAAG":378824, "GCATA":487422, "GCATT":717543, "GCATC":539585, "GCATG":539678, "GCACA":794091, "GCACT":566791, "GCACC":482756, "GCACG":170560, "GCAGA":596090, "GCAGT":572472, "GCAGC":612685, "GCAGG":448766, "GCTAA":492085, "GCTAT":565918, "GCTAC":639669, "GCTAG":399579, "GCTTA":328232, "GCTTT":834271, "GCTTC":578695, "GCTTG":397209, "GCTCA":569136, "GCTCT":1036374, "GCTCC":574446, "GCTCG":161551, "GCTGA":592784, "GCTGT":929404, "GCTGC":656117, "GCTGG":460258, "GCCAA":583004, "GCCAT":702452, "GCCAC":595510, "GCCAG":507155, "GCCTA":462157, "GCCTT":606820, "GCCTC":672768, "GCCTG":518038, "GCCCA":541601, "GCCCT":573888, "GCCCC":481207, "GCCCG":126237, "GCCGA":147694, "GCCGT":163906, "GCCGC":158558, "GCCGG":126150, "GCGAA":122594, "GCGAT":118886, "GCGAC":125018, "GCGAG":113632, "GCGTA":110178, "GCGTT":195725, "GCGTC":156664, "GCGTG":171801, "GCGCA":151034, "GCGCT":184967, "GCGCC":130827, "GCGCG":62369, "GCGGA":98306, "GCGGT":129744, "GCGGC":113068, "GCGGG":87299, "GGAAA":678803, "GGAAT":502510, "GGAAC":436726, "GGAAG":445953, "GGATA":355200, "GGATT":464517, "GGATC":331280, "GGATG":431957, "GGACA":667303, "GGACT":446389, "GGACC":364597, "GGACG":150030, "GGAGA":592448, "GGAGT":389138, "GGAGC":343988, "GGAGG":438372, "GGTAA":422978, "GGTAT":434805, "GGTAC":371560, "GGTAG":311117, "GGTTA":429907, "GGTTT":616592, "GGTTC":344522, "GGTTG":403746, "GGTCA":553488, "GGTCT":503914, "GGTCC":338046, "GGTCG":116521, "GGTGA":419595, "GGTGT":591350, "GGTGC":303175, "GGTGG":367238, "GGCAA":380555, "GGCAT":417968, "GGCAC":355370, "GGCAG":439536, "GGCTA":456031, "GGCTT":420194, "GGCTC":395099, "GGCTG":524376, "GGCCA":510528, "GGCCT":465717, "GGCCC":331125, "GGCCG":134381, "GGCGA":119409, "GGCGT":116624, "GGCGC":115449, "GGCGG":121717, "GGGAA":395765, "GGGAT":316315, "GGGAC":295142, "GGGAG":322995, "GGGTA":276101, "GGGTT":327916, "GGGTC":252117, "GGGTG":304945, "GGGCA":274149, "GGGCT":273693, "GGGCC":264984, "GGGCG":88907, "GGGGA":269971, "GGGGT":242285, "GGGGC":181313, "GGGGG":237903 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212409_sample_1703780_S119_L001_R1_001.fastq.gz --in2 lib_212409_sample_1703780_S119_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212409_sample_1703780_S119_L001_R2_001.fastp-trim.fq.gz " }