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"GC":[0.677592,0.504554,0.40222,0.445342,0.428522,0.425988,0.338424,0.42802,0.482053,0.347051,0.524646,0.498271,0.420267,0.434727,0.405701,0.430561,0.453984,0.40844,0.444918,0.418021,0.444918,0.413522,0.427758,0.435267,0.417273,0.449815,0.443657,0.408251,0.459439,0.406167,0.440652,0.417945,0.443935,0.409282,0.424281,0.407596,0.442257,0.418859,0.445536,0.406321,0.456595,0.437485,0.451881,0.422605,0.415838,0.441784,0.438621,0.437931,0.447178,0.422293,0.417991,0.407586,0.457977,0.440365,0.445435,0.448613,0.416253,0.438574,0.430175,0.411687,0.446558,0.426809,0.448319,0.446349,0.439486,0.412056,0.451981,0.428103,0.420744,0.415372,0.43808,0.439788,0.448109,0.455694,0.452255,0.444879,0.459866,0.441964,0.449724,0.455322,0.450428,0.445967,0.461376,0.44693,0.458067,0.460669,0.455309,0.450322,0.467951,0.448215,0.457124,0.461144,0.455611,0.452055,0.466371,0.453719,0.457398,0.46046,0.456981,0.450769,0.470245] }, "kmer_count": { "AAAAA":3096328, "AAAAT":2013120, "AAAAC":1397244, "AAAAG":1769342, 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"AGGTG":1263412, "AGGCA":1440235, "AGGCT":693025, "AGGCC":452605, "AGGCG":214289, "AGGGA":1724002, "AGGGT":1505178, "AGGGC":530611, "AGGGG":1905436, "TAAAA":1821717, "TAAAT":1421887, "TAAAC":867237, "TAAAG":1076961, "TAATA":1170660, "TAATT":918781, "TAATC":511050, "TAATG":1481775, "TAACA":1178967, "TAACT":672822, "TAACC":399392, "TAACG":249224, "TAAGA":889330, "TAAGT":658500, "TAAGC":313647, "TAAGG":790574, "TATAA":1120290, "TATAT":1676678, "TATAC":771916, "TATAG":1370750, "TATTA":1075292, "TATTT":1518415, "TATTC":637090, "TATTG":1130062, "TATCA":694272, "TATCT":586842, "TATCC":332884, "TATCG":196441, "TATGA":940841, "TATGT":1639494, "TATGC":872234, "TATGG":1049843, "TACAA":955542, "TACAT":1147126, "TACAC":721180, "TACAG":1505111, "TACTA":581813, "TACTT":664530, "TACTC":375755, "TACTG":1033092, "TACCA":564739, "TACCT":506867, "TACCC":249497, "TACCG":160383, "TACGA":198284, "TACGT":244217, "TACGC":104721, "TACGG":236307, "TAGAA":1179630, "TAGAT":1478680, "TAGAC":660718, "TAGAG":1901956, 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"GC":[0.411401,0.435452,0.418551,0.42611,0.428732,0.426055,0.424096,0.438341,0.41668,0.427363,0.431678,0.424829,0.418199,0.441555,0.416617,0.422231,0.428806,0.425462,0.419509,0.434965,0.417425,0.423017,0.428908,0.42648,0.415861,0.437874,0.417869,0.432747,0.43262,0.424722,0.422217,0.440237,0.417391,0.426522,0.430975,0.426606,0.415376,0.438517,0.419163,0.423955,0.427934,0.421864,0.416624,0.434925,0.417345,0.424537,0.429257,0.426055,0.424065,0.440908,0.416846,0.429875,0.433695,0.425305,0.417016,0.439004,0.417157,0.423093,0.431489,0.426508,0.418497,0.434592,0.414228,0.421598,0.428306,0.421059,0.416995,0.433707,0.416998,0.428392,0.431491,0.423955,0.418851,0.438507,0.414872,0.424103,0.429912,0.422097,0.41799,0.433879,0.418178,0.421382,0.425582,0.420196,0.411605,0.433718] }, "kmer_count": { "AAAAA":2459236, "AAAAT":1659991, "AAAAC":1148260, "AAAAG":1262757, "AAATA":1754733, "AAATT":869437, "AAATC":658626, "AAATG":1452851, "AAACA":1740738, "AAACT":723604, "AAACC":499437, "AAACG":316519, 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"GC":[0.42578,0.428475,0.423404,0.431513,0.42397,0.429676,0.436766,0.430846,0.420911,0.432575,0.431282,0.423342,0.428422,0.435146,0.420846,0.424651,0.426777,0.426338,0.422682,0.429145,0.421015,0.429743,0.421729,0.431774,0.425446,0.428339,0.418947,0.439587,0.424183,0.427547,0.425576,0.43314,0.417528,0.434381,0.427222,0.426897,0.419864,0.433176,0.421454,0.426935,0.423572,0.426847,0.420603,0.427077,0.421443,0.430232,0.418254,0.425127,0.430601,0.42816,0.417821,0.429235,0.423819,0.421272,0.424877,0.431358,0.417021,0.42297,0.42338,0.42398,0.421683,0.426981,0.416152,0.424216,0.419271,0.42687,0.422346,0.423541,0.415747,0.433497,0.420309,0.421995,0.421829,0.429073,0.413616,0.428673,0.423333,0.421866,0.417594,0.428745,0.41852,0.425826,0.418461,0.422832,0.417752,0.425112] }, "kmer_count": { "AAAAA":1836015, "AAAAT":1246088, "AAAAC":1114563, "AAAAG":683801, "AAATA":1296410, "AAATT":755480, "AAATC":695637, "AAATG":1116962, "AAACA":1632741, "AAACT":826706, "AAACC":858405, "AAACG":278336, 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"CGCCG":67639, "CGCGA":42755, "CGCGT":53462, "CGCGC":76163, "CGCGG":40822, "CGGAA":182213, "CGGAT":111406, "CGGAC":130280, "CGGAG":154159, "CGGTA":142832, "CGGTT":141238, "CGGTC":140239, "CGGTG":158889, "CGGCA":153799, "CGGCT":159355, "CGGCC":144594, "CGGCG":65027, "CGGGA":109624, "CGGGT":80494, "CGGGC":82895, "CGGGG":91301, "GAAAA":738127, "GAAAT":712729, "GAAAC":594729, "GAAAG":465106, "GAATA":517836, "GAATT":499485, "GAATC":344061, "GAATG":513682, "GAACA":738543, "GAACT":453345, "GAACC":414138, "GAACG":184620, "GAAGA":550807, "GAAGT":429012, "GAAGC":335454, "GAAGG":352763, "GATAA":404479, "GATAT":513596, "GATAC":377387, "GATAG":262514, "GATTA":434377, "GATTT":675243, "GATTC":395637, "GATTG":397833, "GATCA":456333, "GATCT":451871, "GATCC":331977, "GATCG":182143, "GATGA":555632, "GATGT":608988, "GATGC":373235, "GATGG":374518, "GACAA":796035, "GACAT":784055, "GACAC":922597, "GACAG":726794, "GACTA":454937, "GACTT":460292, "GACTC":490506, "GACTG":578529, "GACCA":660416, "GACCT":447102, "GACCC":435729, "GACCG":129716, "GACGA":197875, "GACGT":172869, "GACGC":131143, "GACGG":139974, "GAGAA":584221, "GAGAT":451008, "GAGAC":552416, "GAGAG":829437, "GAGTA":320669, "GAGTT":363898, "GAGTC":301627, "GAGTG":368126, "GAGCA":383854, "GAGCT":400193, "GAGCC":323828, "GAGCG":148587, "GAGGA":492675, "GAGGT":341407, "GAGGC":288407, "GAGGG":268044, "GTAAA":677633, "GTAAT":582851, "GTAAC":484836, "GTAAG":265165, "GTATA":619286, "GTATT":754992, "GTATC":431891, "GTATG":463392, "GTACA":774783, "GTACT":603955, "GTACC":455370, "GTACG":123665, "GTAGA":421508, "GTAGT":403452, "GTAGC":350686, "GTAGG":268714, "GTTAA":541612, "GTTAT":618571, "GTTAC":552769, "GTTAG":347173, "GTTTA":720836, "GTTTT":1134752, "GTTTC":693905, "GTTTG":716130, "GTTCA":676792, "GTTCT":760157, "GTTCC":558243, "GTTCG":116040, "GTTGA":541431, "GTTGT":719357, "GTTGC":481976, "GTTGG":339501, "GTCAA":580775, "GTCAT":733213, "GTCAC":589850, "GTCAG":536564, "GTCTA":537642, "GTCTT":650041, "GTCTC":1137217, "GTCTG":851353, "GTCCA":574676, "GTCCT":682059, "GTCCC":496617, "GTCCG":133700, "GTCGA":127638, "GTCGT":165916, "GTCGC":123966, "GTCGG":100085, "GTGAA":532092, "GTGAT":461584, "GTGAC":419215, "GTGAG":326613, "GTGTA":598278, "GTGTT":884507, "GTGTC":627084, "GTGTG":1548187, "GTGCA":447162, "GTGCT":447546, "GTGCC":324398, "GTGCG":124133, "GTGGA":437918, "GTGGT":415106, "GTGGC":315269, "GTGGG":241166, "GCAAA":504644, "GCAAT":407701, "GCAAC":546218, "GCAAG":326014, "GCATA":376022, "GCATT":576486, "GCATC":423379, "GCATG":397306, "GCACA":691257, "GCACT":455343, "GCACC":415737, "GCACG":133931, "GCAGA":475250, "GCAGT":437050, "GCAGC":594403, "GCAGG":357262, "GCTAA":403477, "GCTAT":454557, "GCTAC":646988, "GCTAG":306720, "GCTTA":259524, "GCTTT":668056, "GCTTC":514035, "GCTTG":303435, "GCTCA":484548, "GCTCT":940214, "GCTCC":1102473, "GCTCG":150753, "GCTGA":501229, "GCTGT":774297, "GCTGC":1174812, "GCTGG":482043, "GCCAA":484210, "GCCAT":573122, "GCCAC":538856, "GCCAG":390608, "GCCTA":373325, "GCCTT":500806, "GCCTC":501758, "GCCTG":401999, "GCCCA":467375, "GCCCT":436685, "GCCCC":422917, "GCCCG":104598, "GCCGA":125373, "GCCGT":130825, "GCCGC":129614, "GCCGG":101727, "GCGAA":104697, "GCGAT":99166, "GCGAC":102546, "GCGAG":90833, "GCGTA":89556, "GCGTT":145987, "GCGTC":137954, "GCGTG":128254, "GCGCA":122840, "GCGCT":157301, "GCGCC":106779, "GCGCG":52915, "GCGGA":82085, "GCGGT":101051, "GCGGC":97256, "GCGGG":66798, "GGAAA":572108, "GGAAT":396588, "GGAAC":371610, "GGAAG":369899, "GGATA":296391, "GGATT":375337, "GGATC":274869, "GGATG":361481, "GGACA":679232, "GGACT":372323, "GGACC":303572, "GGACG":127007, "GGAGA":505483, "GGAGT":321581, "GGAGC":298927, "GGAGG":365462, "GGTAA":323185, "GGTAT":340576, "GGTAC":366698, "GGTAG":246869, "GGTTA":341151, "GGTTT":498545, "GGTTC":295287, "GGTTG":307833, "GGTCA":442239, "GGTCT":471526, "GGTCC":272803, "GGTCG":92003, "GGTGA":376016, "GGTGT":495347, "GGTGC":248979, "GGTGG":286736, "GGCAA":324239, "GGCAT":332179, "GGCAC":299033, "GGCAG":356607, "GGCTA":364946, "GGCTT":329873, "GGCTC":330304, "GGCTG":400977, "GGCCA":417981, "GGCCT":380996, "GGCCC":272116, "GGCCG":111889, "GGCGA":102380, "GGCGT":89542, "GGCGC":99243, "GGCGG":93504, "GGGAA":318067, "GGGAT":252774, "GGGAC":241981, "GGGAG":279675, "GGGTA":220318, "GGGTT":247827, "GGGTC":194910, "GGGTG":230467, "GGGCA":235503, "GGGCT":214926, "GGGCC":207165, "GGGCG":67208, "GGGGA":224191, "GGGGT":181858, "GGGGC":147906, "GGGGG":173302 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212408_sample_1703712_S110_L001_R1_001.fastq.gz --in2 lib_212408_sample_1703712_S110_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212408_sample_1703712_S110_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212408_sample_1703712_S110_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212408_sample_1703712_S110_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212408_sample_1703712_S110_L001_R2_001.fastp-trim.fq.gz " }