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"GC":[0.674182,0.499533,0.398791,0.448989,0.413315,0.426669,0.336878,0.415686,0.489657,0.347162,0.518023,0.502851,0.420724,0.430353,0.409843,0.438712,0.448915,0.410598,0.44967,0.408929,0.449014,0.410491,0.416557,0.439042,0.417039,0.442998,0.445523,0.412259,0.449072,0.40935,0.445998,0.409135,0.445096,0.442134,0.417405,0.412149,0.417292,0.44304,0.447723,0.409994,0.448715,0.410289,0.447904,0.411801,0.415354,0.442802,0.420365,0.439024,0.448524,0.419243,0.41659,0.411326,0.446714,0.441539,0.447089,0.442961,0.429572,0.443093,0.433091,0.414479,0.448879,0.427779,0.448341,0.443818,0.441361,0.416887,0.450962,0.423992,0.421984,0.418673,0.430585,0.441472,0.449383,0.446894,0.450452,0.447449,0.452657,0.445813,0.453376,0.447611,0.451702,0.446081,0.451466,0.446404,0.452463,0.448383,0.452531,0.449478,0.456256,0.448663,0.456722,0.451193,0.45358,0.452639,0.456456,0.452887,0.457151,0.454084,0.457932,0.453709,0.461886] }, "kmer_count": { "AAAAA":4161093, "AAAAT":2755782, "AAAAC":1972023, "AAAAG":2324187, "AAATA":2995778, "AAATT":1424347, "AAATC":1123762, "AAATG":2413533, "AAACA":3154629, "AAACT":1228802, "AAACC":822497, "AAACG":584917, "AAAGA":3138812, "AAAGT":1706496, "AAAGC":1155855, "AAAGG":1997565, "AATAA":2550762, "AATAT":1948750, "AATAC":1363360, "AATAG":1613203, "AATTA":1398378, "AATTT":1269980, "AATTC":811127, "AATTG":1172138, "AATCA":1386157, "AATCT":865606, "AATCC":623089, "AATCG":264534, "AATGA":2104453, "AATGT":2426962, "AATGC":1009820, "AATGG":1614070, "AACAA":2321951, "AACAT":2054301, "AACAC":1558654, "AACAG":2594336, "AACTA":1042810, "AACTT":866126, "AACTC":1680670, "AACTG":1238063, "AACCA":1011878, "AACCT":710196, "AACCC":422952, "AACCG":242438, "AACGA":486682, "AACGT":574975, "AACGC":273986, "AACGG":378156, "AAGAA":2089606, "AAGAT":1554412, "AAGAC":1158703, "AAGAG":4839739, "AAGTA":1316178, "AAGTT":1081904, "AAGTC":788746, "AAGTG":1444066, "AAGCA":1931863, "AAGCT":874614, "AAGCC":572544, "AAGCG":299709, "AAGGA":2006812, "AAGGT":1262633, "AAGGC":858070, "AAGGG":1722137, 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"AGGTA":1685592, "AGGTT":1263968, "AGGTC":759703, "AGGTG":1721270, "AGGCA":1212482, "AGGCT":1044508, "AGGCC":654708, "AGGCG":310423, "AGGGA":2803802, "AGGGT":1810708, "AGGGC":835657, "AGGGG":2621077, "TAAAA":2432848, "TAAAT":1977624, "TAAAC":1217687, "TAAAG":1672666, "TAATA":1626470, "TAATT":1252390, "TAATC":720609, "TAATG":1800209, "TAACA":1692574, "TAACT":941727, "TAACC":569626, "TAACG":354954, "TAAGA":1151664, "TAAGT":897148, "TAAGC":1162690, "TAAGG":1050209, "TATAA":1500872, "TATAT":2274935, "TATAC":1160874, "TATAG":1697499, "TATTA":1453808, "TATTT":2110317, "TATTC":932477, "TATTG":1398978, "TATCA":1023817, "TATCT":849156, "TATCC":470193, "TATCG":268023, "TATGA":1343120, "TATGT":2006987, "TATGC":871631, "TATGG":1389211, "TACAA":1346550, "TACAT":1614991, "TACAC":1038962, "TACAG":2225894, "TACTA":766545, "TACTT":904986, "TACTC":545844, "TACTG":1474783, "TACCA":730890, "TACCT":712334, "TACCC":362286, "TACCG":238310, "TACGA":266425, "TACGT":335657, "TACGC":150531, "TACGG":290515, 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"CACAA":1394886, "CACAT":1207878, "CACAC":3632740, "CACAG":2273356, "CACTA":806931, "CACTT":829918, "CACTC":602540, "CACTG":1221117, "CACCA":898733, "CACCT":662054, "CACCC":396977, "CACCG":268641, "CACGA":298221, "CACGT":2505098, "CACGC":241970, "CACGG":297605, "CAGAA":1835905, "CAGAT":2422802, "CAGAC":1549932, "CAGAG":3362115, "CAGTA":1986060, "CAGTT":1193278, "CAGTC":1851534, "CAGTG":1917127, "CAGCA":1427261, "CAGCT":1109621, "CAGCC":691663, "CAGCG":418546, "CAGGA":1555427, "CAGGT":1338294, "CAGGC":731695, "CAGGG":1513167, "CTAAA":1088236, "CTAAT":777203, "CTAAC":635634, "CTAAG":525171, "CTATA":1157277, "CTATT":904877, "CTATC":447164, "CTATG":898894, "CTACA":1111894, "CTACT":713801, "CTACC":425634, "CTACG":251173, "CTAGA":869692, "CTAGT":931537, "CTAGC":541033, "CTAGG":668591, "CTTAA":678377, "CTTAT":670640, "CTTAC":450095, "CTTAG":435977, "CTTTA":998941, "CTTTT":1135702, "CTTTC":744237, "CTTTG":998891, "CTTCA":964697, "CTTCT":907822, "CTTCC":541931, "CTTCG":205767, "CTTGA":921352, 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"GC":[0.427778,0.4293,0.422251,0.428594,0.423196,0.430247,0.427128,0.429695,0.422002,0.428533,0.424754,0.425168,0.426186,0.429239,0.421234,0.427386,0.42083,0.425549,0.423885,0.427196,0.422294,0.428728,0.423423,0.427216,0.42431,0.428857,0.421191,0.429681,0.42357,0.426565,0.425142,0.427358,0.421892,0.430405,0.42341,0.426377,0.423598,0.426783,0.420959,0.42794,0.422703,0.425979,0.421984,0.426915,0.420322,0.427733,0.42078,0.424178,0.423052,0.426202,0.420413,0.42696,0.421233,0.423819,0.422595,0.426815,0.42022,0.425477,0.419076,0.42307,0.422127,0.425024,0.418492,0.424883,0.420094,0.424061,0.419861,0.424478,0.417696,0.424441,0.420139,0.422269,0.420537,0.423403,0.417536,0.426326,0.42013,0.422463,0.420742,0.423431,0.419903,0.425411,0.418865,0.422449,0.420651,0.423632] }, "kmer_count": { "AAAAA":2704282, "AAAAT":1763110, "AAAAC":1341418, "AAAAG":999200, "AAATA":1825223, "AAATT":1063495, "AAATC":967559, "AAATG":1547710, "AAACA":2027005, "AAACT":1116914, "AAACC":1000020, "AAACG":388790, 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"CCCTA":1199086, "CCCTT":1109483, "CCCTC":2112647, "CCCTG":1170502, "CCCCA":1223054, "CCCCT":1520179, "CCCCC":1139505, "CCCCG":315027, "CCCGA":183087, "CCCGT":283866, "CCCGC":235226, "CCCGG":194902, "CCGAA":169071, "CCGAT":229794, "CCGAC":231600, "CCGAG":202171, "CCGTA":235070, "CCGTT":303454, "CCGTC":352902, "CCGTG":246657, "CCGCA":218910, "CCGCT":291656, "CCGCC":292518, "CCGCG":71194, "CCGGA":171995, "CCGGT":211910, "CCGGC":183514, "CCGGG":164653, "CGAAA":219340, "CGAAT":184486, "CGAAC":179286, "CGAAG":146700, "CGATA":216097, "CGATT":229155, "CGATC":198810, "CGATG":239211, "CGACA":311931, "CGACT":234715, "CGACC":255446, "CGACG":107936, "CGAGA":249379, "CGAGT":163328, "CGAGC":163887, "CGAGG":182450, "CGTAA":208932, "CGTAT":224028, "CGTAC":216404, "CGTAG":211511, "CGTTA":307257, "CGTTT":448263, "CGTTC":327772, "CGTTG":301533, "CGTCA":346984, "CGTCT":434805, "CGTCC":291872, "CGTCG":97800, "CGTGA":214587, "CGTGT":352004, "CGTGC":213454, "CGTGG":211079, "CGCAA":224519, "CGCAT":213568, "CGCAC":287678, "CGCAG":239583, "CGCTA":254679, "CGCTT":237483, "CGCTC":527308, "CGCTG":349637, "CGCCA":288893, "CGCCT":255072, "CGCCC":300787, "CGCCG":101454, "CGCGA":59807, "CGCGT":72264, "CGCGC":100154, "CGCGG":61270, "CGGAA":233579, "CGGAT":154438, "CGGAC":186753, "CGGAG":222545, "CGGTA":210854, "CGGTT":203019, "CGGTC":209955, "CGGTG":230428, "CGGCA":209744, "CGGCT":222809, "CGGCC":213352, "CGGCG":96133, "CGGGA":163369, "CGGGT":124766, "CGGGC":132730, "CGGGG":140937, "GAAAA":1087708, "GAAAT":994851, "GAAAC":843493, "GAAAG":649000, "GAATA":763473, "GAATT":684466, "GAATC":506434, "GAATG":755986, "GAACA":999024, "GAACT":596414, "GAACC":549722, "GAACG":254516, "GAAGA":749415, "GAAGT":604621, "GAAGC":455947, "GAAGG":497218, "GATAA":586332, "GATAT":726809, "GATAC":519817, "GATAG":395314, "GATTA":608907, "GATTT":971575, "GATTC":522361, "GATTG":586497, "GATCA":631130, "GATCT":641926, "GATCC":428893, "GATCG":222788, "GATGA":783969, "GATGT":881451, "GATGC":507706, "GATGG":539423, "GACAA":885243, "GACAT":1018791, "GACAC":1022620, "GACAG":987472, "GACTA":659289, "GACTT":644637, "GACTC":661782, "GACTG":849404, "GACCA":886702, "GACCT":629653, "GACCC":641721, "GACCG":178716, "GACGA":262135, "GACGT":244619, "GACGC":181751, "GACGG":201118, "GAGAA":831029, "GAGAT":632255, "GAGAC":711823, "GAGAG":1015983, "GAGTA":464696, "GAGTT":544591, "GAGTC":436708, "GAGTG":550379, "GAGCA":576633, "GAGCT":563577, "GAGCC":470337, "GAGCG":198611, "GAGGA":707634, "GAGGT":485111, "GAGGC":424110, "GAGGG":391614, "GTAAA":956820, "GTAAT":820701, "GTAAC":651199, "GTAAG":388957, "GTATA":940843, "GTATT":1099426, "GTATC":632067, "GTATG":698701, "GTACA":976590, "GTACT":721531, "GTACC":597437, "GTACG":176271, "GTAGA":633862, "GTAGT":623746, "GTAGC":502922, "GTAGG":396361, "GTTAA":790514, "GTTAT":915581, "GTTAC":727033, "GTTAG":532555, "GTTTA":1010756, "GTTTT":1614425, "GTTTC":1078398, "GTTTG":1026834, "GTTCA":901263, "GTTCT":1205304, "GTTCC":721520, "GTTCG":155872, "GTTGA":784848, "GTTGT":1101019, "GTTGC":542626, "GTTGG":507126, "GTCAA":784972, "GTCAT":1025675, "GTCAC":871249, "GTCAG":818336, "GTCTA":771016, "GTCTT":924584, "GTCTC":1695492, "GTCTG":1311455, "GTCCA":813148, "GTCCT":963276, "GTCCC":746216, "GTCCG":165593, "GTCGA":160390, "GTCGT":238330, "GTCGC":175625, "GTCGG":153026, "GTGAA":741332, "GTGAT":654429, "GTGAC":602699, "GTGAG":485913, "GTGTA":871153, "GTGTT":1297947, "GTGTC":859025, "GTGTG":1833714, "GTGCA":668436, "GTGCT":646965, "GTGCC":484095, "GTGCG":183970, "GTGGA":627795, "GTGGT":624711, "GTGGC":460576, "GTGGG":376560, "GCAAA":708599, "GCAAT":576294, "GCAAC":579385, "GCAAG":442075, "GCATA":552829, "GCATT":819065, "GCATC":628026, "GCATG":623502, "GCACA":902067, "GCACT":650117, "GCACC":561810, "GCACG":199627, "GCAGA":711642, "GCAGT":665708, "GCAGC":723769, "GCAGG":538470, "GCTAA":559542, "GCTAT":648458, "GCTAC":731088, "GCTAG":463659, "GCTTA":378957, "GCTTT":952417, "GCTTC":666530, "GCTTG":455825, "GCTCA":663240, "GCTCT":1181920, "GCTCC":666109, "GCTCG":186399, "GCTGA":685101, "GCTGT":1065288, "GCTGC":767368, "GCTGG":551083, "GCCAA":683117, "GCCAT":806920, "GCCAC":703642, "GCCAG":602168, "GCCTA":533518, "GCCTT":698152, "GCCTC":782573, "GCCTG":623195, "GCCCA":645534, "GCCCT":679971, "GCCCC":566348, "GCCCG":152636, "GCCGA":176726, "GCCGT":195892, "GCCGC":187464, "GCCGG":155500, "GCGAA":144895, "GCGAT":139247, "GCGAC":147314, "GCGAG":139992, "GCGTA":127539, "GCGTT":227487, "GCGTC":187165, "GCGTG":202099, "GCGCA":175569, "GCGCT":218892, "GCGCC":158162, "GCGCG":75867, "GCGGA":117942, "GCGGT":155161, "GCGGC":135500, "GCGGG":108170, "GGAAA":788320, "GGAAT":576713, "GGAAC":508233, "GGAAG":523235, "GGATA":413941, "GGATT":535772, "GGATC":388729, "GGATG":515053, "GGACA":781842, "GGACT":520028, "GGACC":431985, "GGACG":181507, "GGAGA":712498, "GGAGT":462779, "GGAGC":417129, "GGAGG":532181, "GGTAA":478992, "GGTAT":495250, "GGTAC":425134, "GGTAG":366229, "GGTTA":493512, "GGTTT":713677, "GGTTC":404120, "GGTTG":470295, "GGTCA":644367, "GGTCT":579526, "GGTCC":398596, "GGTCG":137230, "GGTGA":496092, "GGTGT":691145, "GGTGC":358694, "GGTGG":439344, "GGCAA":449534, "GGCAT":482249, "GGCAC":416369, "GGCAG":523781, "GGCTA":533374, "GGCTT":488111, "GGCTC":473691, "GGCTG":616928, "GGCCA":608569, "GGCCT":549739, "GGCCC":401050, "GGCCG":164585, "GGCGA":145243, "GGCGT":139858, "GGCGC":140608, "GGCGG":148446, "GGGAA":465104, "GGGAT":376854, "GGGAC":355928, "GGGAG":397180, "GGGTA":326113, "GGGTT":388535, "GGGTC":294212, "GGGTG":364065, "GGGCA":328612, "GGGCT":329345, "GGGCC":321189, "GGGCG":108030, "GGGGA":327109, "GGGGT":287945, "GGGGC":221807, "GGGGG":284593 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212406_sample_1703759_S118_L002_R1_001.fastq.gz --in2 lib_212406_sample_1703759_S118_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212406_sample_1703759_S118_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212406_sample_1703759_S118_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212406_sample_1703759_S118_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212406_sample_1703759_S118_L002_R2_001.fastp-trim.fq.gz " }