FastQCFastQC Report
Wed 20 May 2026
lib_212405_sample_1703708_S109_L002_R1_001.fastp-trim.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamelib_212405_sample_1703708_S109_L002_R1_001.fastp-trim.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7965535
Total Bases644.4 Mbp
Sequences flagged as poor quality0
Sequence length15-86
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAAAGCTCAGAAGAAGCCCAAGAAGAAGAATACTTCAGAGGTAATGAA96810.12153609267927389No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)