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"AGGTG":1367263, "AGGCA":787772, "AGGCT":609709, "AGGCC":397360, "AGGCG":297041, "AGGGA":1014015, "AGGGT":758155, "AGGGC":485536, "AGGGG":1089654, "TAAAA":2655073, "TAAAT":1759596, "TAAAC":1053226, "TAAAG":1331139, "TAATA":1281804, "TAATT":1056905, "TAATC":549510, "TAATG":1182883, "TAACA":1096598, "TAACT":673885, "TAACC":326086, "TAACG":253941, "TAAGA":941253, "TAAGT":696438, "TAAGC":405255, "TAAGG":641164, "TATAA":1141780, "TATAT":1462842, "TATAC":572890, "TATAG":603365, "TATTA":1171846, "TATTT":1698772, "TATTC":620903, "TATTG":861750, "TATCA":733680, "TATCT":607800, "TATCC":326810, "TATCG":183571, "TATGA":869182, "TATGT":1148853, "TATGC":640861, "TATGG":555274, "TACAA":1158113, "TACAT":1338536, "TACAC":624356, "TACAG":1026485, "TACTA":474299, "TACTT":734932, "TACTC":362900, "TACTG":834666, "TACCA":419448, "TACCT":331584, "TACCC":169578, "TACCG":160380, "TACGA":228313, "TACGT":261191, "TACGC":121974, "TACGG":156701, "TAGAA":956601, "TAGAT":896541, "TAGAC":393803, "TAGAG":781369, 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"GC":[0.413739,0.41753,0.409117,0.414107,0.411159,0.413629,0.414025,0.415256,0.406142,0.412663,0.408541,0.408016,0.409119,0.4127,0.405784,0.411147,0.406869,0.406595,0.409187,0.410449,0.407354,0.411704,0.407996,0.408756,0.409628,0.410918,0.403768,0.41006,0.409129,0.410035,0.409661,0.410663,0.403995,0.41164,0.404684,0.407182,0.405968,0.409223,0.404384,0.409184,0.407565,0.406373,0.406769,0.409559,0.402635,0.409192,0.403997,0.403707,0.406538,0.40863,0.403135,0.408217,0.404566,0.403923,0.40555,0.40709,0.401746,0.407087,0.403226,0.403828,0.404056,0.40676,0.402226,0.406602,0.403418,0.404288,0.403628,0.406307,0.4021,0.40593,0.402719,0.401715,0.40446,0.406232,0.400988,0.406685,0.403492,0.404409,0.403937,0.407287,0.401228,0.405883,0.402043,0.403787,0.404217,0.404934] }, "kmer_count": { "AAAAA":3092792, "AAAAT":1514052, "AAAAC":1280523, "AAAAG":1111831, "AAATA":1478837, "AAATT":975000, "AAATC":860243, "AAATG":1287903, "AAACA":1744020, "AAACT":983642, "AAACC":833127, "AAACG":345344, 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"CTGAG":585767, "CTGTA":841781, "CTGTT":1262541, "CTGTC":1028720, "CTGTG":888146, "CTGCA":974105, "CTGCT":1076128, "CTGCC":603644, "CTGCG":225225, "CTGGA":600300, "CTGGT":557828, "CTGGC":434564, "CTGGG":333399, "CCAAA":937804, "CCAAT":472759, "CCAAC":696121, "CCAAG":448991, "CCATA":445224, "CCATT":772236, "CCATC":782793, "CCATG":563582, "CCACA":800597, "CCACT":675681, "CCACC":726892, "CCACG":275244, "CCAGA":625720, "CCAGT":612274, "CCAGC":644710, "CCAGG":445029, "CCTAA":468017, "CCTAT":304211, "CCTAC":450176, "CCTAG":163362, "CCTTA":508656, "CCTTT":1046465, "CCTTC":927909, "CCTTG":486246, "CCTCA":974031, "CCTCT":1270923, "CCTCC":1203329, "CCTCG":284877, "CCTGA":643827, "CCTGT":730061, "CCTGC":619173, "CCTGG":457177, "CCCAA":527600, "CCCAT":484493, "CCCAC":543110, "CCCAG":499389, "CCCTA":364505, "CCCTT":655095, "CCCTC":906647, "CCCTG":536033, "CCCCA":558314, "CCCCT":703738, "CCCCC":779876, "CCCCG":264587, "CCCGA":171251, "CCCGT":200589, "CCCGC":205495, "CCCGG":196317, "CCGAA":149540, "CCGAT":156508, "CCGAC":230394, "CCGAG":178538, "CCGTA":132254, "CCGTT":242503, "CCGTC":318895, "CCGTG":214861, "CCGCA":203798, "CCGCT":245443, "CCGCC":260709, "CCGCG":104765, "CCGGA":185276, "CCGGT":148728, "CCGGC":204937, "CCGGG":132145, "CGAAA":212897, "CGAAT":114583, "CGAAC":119933, "CGAAG":125242, "CGATA":141766, "CGATT":162458, "CGATC":132602, "CGATG":210234, "CGACA":265908, "CGACT":221195, "CGACC":261836, "CGACG":121753, "CGAGA":181117, "CGAGT":149821, "CGAGC":192555, "CGAGG":160252, "CGTAA":182225, "CGTAT":163311, "CGTAC":192614, "CGTAG":137341, "CGTTA":214829, "CGTTT":380194, "CGTTC":224877, "CGTTG":204777, "CGTCA":298617, "CGTCT":367662, "CGTCC":267517, "CGTCG":147505, "CGTGA":179982, "CGTGT":278521, "CGTGC":167571, "CGTGG":188001, "CGCAA":178461, "CGCAT":193829, "CGCAC":220161, "CGCAG":223036, "CGCTA":156444, "CGCTT":236879, "CGCTC":269767, "CGCTG":315379, "CGCCA":260514, "CGCCT":252891, "CGCCC":277080, "CGCCG":159894, "CGCGA":61317, "CGCGT":79324, "CGCGC":60303, "CGCGG":110296, "CGGAA":143956, "CGGAT":147972, "CGGAC":192985, "CGGAG":222696, "CGGTA":135062, "CGGTT":178996, "CGGTC":135432, "CGGTG":197970, "CGGCA":203046, "CGGCT":221097, "CGGCC":217443, "CGGCG":131619, "CGGGA":143413, "CGGGT":95616, "CGGGC":111387, "CGGGG":125875, "GAAAA":1094271, "GAAAT":799944, "GAAAC":670361, "GAAAG":530436, "GAATA":535247, "GAATT":555673, "GAATC":364463, "GAATG":502577, "GAACA":680633, "GAACT":432202, "GAACC":387643, "GAACG":181689, "GAAGA":624354, "GAAGT":512612, "GAAGC":440329, "GAAGG":360626, "GATAA":526884, "GATAT":547024, "GATAC":317842, "GATAG":209801, "GATTA":482571, "GATTT":846746, "GATTC":390691, "GATTG":411038, "GATCA":575419, "GATCT":400115, "GATCC":347860, "GATCG":159690, "GATGA":676275, "GATGT":652597, "GATGC":415265, "GATGG":374839, "GACAA":689622, "GACAT":723117, "GACAC":585628, "GACAG":555708, "GACTA":337084, "GACTT":578868, "GACTC":450731, "GACTG":525896, "GACCA":549465, "GACCT":441600, "GACCC":337296, "GACCG":162948, "GACGA":236394, "GACGT":221595, "GACGC":205600, "GACGG":195344, "GAGAA":637990, "GAGAT":464292, "GAGAC":462396, "GAGAG":510641, "GAGTA":304641, "GAGTT":483335, "GAGTC":345249, "GAGTG":364571, "GAGCA":495795, "GAGCT":496364, "GAGCC":351151, "GAGCG":177238, "GAGGA":573668, "GAGGT":319262, "GAGGC":342047, "GAGGG":255862, "GTAAA":789092, "GTAAT":591600, "GTAAC":423759, "GTAAG":278223, "GTATA":475399, "GTATT":775515, "GTATC":389531, "GTATG":417182, "GTACA":631291, "GTACT":507005, "GTACC":246280, "GTACG":138460, "GTAGA":359984, "GTAGT":380673, "GTAGC":277835, "GTAGG":184564, "GTTAA":660696, "GTTAT":614379, "GTTAC":413411, "GTTAG":277581, "GTTTA":891130, "GTTTT":1599543, "GTTTC":795162, "GTTTG":963672, "GTTCA":689364, "GTTCT":638126, "GTTCC":451892, "GTTCG":130408, "GTTGA":526799, "GTTGT":855445, "GTTGC":468917, "GTTGG":372027, "GTCAA":559852, "GTCAT":680359, "GTCAC":534319, "GTCAG":531279, "GTCTA":334487, "GTCTT":702319, "GTCTC":668276, "GTCTG":692685, "GTCCA":556200, "GTCCT":647773, "GTCCC":373447, "GTCCG":170904, "GTCGA":129631, "GTCGT":198172, "GTCGC":194019, "GTCGG":159343, "GTGAA":592643, "GTGAT":523009, "GTGAC":467603, "GTGAG":365343, "GTGTA":523921, "GTGTT":918984, "GTGTC":550291, "GTGTG":1092668, "GTGCA":539995, "GTGCT":570006, "GTGCC":333158, "GTGCG":141920, "GTGGA":458251, "GTGGT":399673, "GTGGC":317791, "GTGGG":228712, "GCAAA":674843, "GCAAT":406618, "GCAAC":541672, "GCAAG":366861, "GCATA":365457, "GCATT":643150, "GCATC":496082, "GCATG":465259, "GCACA":647171, "GCACT":540050, "GCACC":424137, "GCACG":143633, "GCAGA":644633, "GCAGT":532190, "GCAGC":755745, "GCAGG":424954, "GCTAA":421664, "GCTAT":340630, "GCTAC":354107, "GCTAG":173227, "GCTTA":333233, "GCTTT":914214, "GCTTC":627733, "GCTTG":338642, "GCTCA":578751, "GCTCT":644979, "GCTCC":519402, "GCTCG":179671, "GCTGA":613975, "GCTGT":853098, "GCTGC":733925, "GCTGG":465072, "GCCAA":518372, "GCCAT":531033, "GCCAC":426707, "GCCAG":399233, "GCCTA":209777, "GCCTT":579109, "GCCTC":541400, "GCCTG":392545, "GCCCA":370081, "GCCCT":399491, "GCCCC":387446, "GCCCG":171119, "GCCGA":160941, "GCCGT":233499, "GCCGC":198457, "GCCGG":147975, "GCGAA":90217, "GCGAT":107636, "GCGAC":171875, "GCGAG":142033, "GCGTA":107752, "GCGTT":203131, "GCGTC":196521, "GCGTG":171387, "GCGCA":134150, "GCGCT":166987, "GCGCC":192518, "GCGCG":69294, "GCGGA":125162, "GCGGT":118213, "GCGGC":161215, "GCGGG":95145, "GGAAA":628703, "GGAAT":351713, "GGAAC":323344, "GGAAG":372026, "GGATA":282933, "GGATT":363717, "GGATC":286402, "GGATG":376064, "GGACA":522474, "GGACT":409720, "GGACC":287905, "GGACG":185875, "GGAGA":496554, "GGAGT":313971, "GGAGC":355880, "GGAGG":412720, "GGTAA":292828, "GGTAT":298034, "GGTAC":203073, "GGTAG":147452, "GGTTA":284560, "GGTTT":593582, "GGTTC":311967, "GGTTG":292132, "GGTCA":387292, "GGTCT":332754, "GGTCC":236439, "GGTCG":119430, "GGTGA":369772, "GGTGT":405542, "GGTGC":351110, "GGTGG":265099, "GGCAA":357238, "GGCAT":310371, "GGCAC":263361, "GGCAG":352473, "GGCTA":219677, "GGCTT":412481, "GGCTC":374379, "GGCTG":448452, "GGCCA":365988, "GGCCT":348325, "GGCCC":252458, "GGCCG":200158, "GGCGA":112903, "GGCGT":154124, "GGCGC":109234, "GGCGG":133461, "GGGAA":310756, "GGGAT":233921, "GGGAC":241575, "GGGAG":255493, "GGGTA":148181, "GGGTT":243197, "GGGTC":178778, "GGGTG":197322, "GGGCA":216734, "GGGCT":260739, "GGGCC":228052, "GGGCG":100850, "GGGGA":196052, "GGGGT":143654, "GGGGC":189026, "GGGGG":183986 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212404_sample_1703681_S101_L002_R1_001.fastq.gz --in2 lib_212404_sample_1703681_S101_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212404_sample_1703681_S101_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212404_sample_1703681_S101_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212404_sample_1703681_S101_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212404_sample_1703681_S101_L002_R2_001.fastp-trim.fq.gz " }