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"AGGTT":1165094, "AGGTC":698831, "AGGTG":1585175, "AGGCA":1111767, "AGGCT":960092, "AGGCC":594034, "AGGCG":284736, "AGGGA":2609683, "AGGGT":1712383, "AGGGC":755584, "AGGGG":2620767, "TAAAA":2250036, "TAAAT":1817227, "TAAAC":1130328, "TAAAG":1638703, "TAATA":1504189, "TAATT":1153672, "TAATC":659529, "TAATG":1689513, "TAACA":1560087, "TAACT":872573, "TAACC":530920, "TAACG":332896, "TAAGA":1051332, "TAAGT":830326, "TAAGC":431202, "TAAGG":981590, "TATAA":1377278, "TATAT":2142490, "TATAC":1083182, "TATAG":1647245, "TATTA":1370466, "TATTT":1943689, "TATTC":852952, "TATTG":1309183, "TATCA":941598, "TATCT":787918, "TATCC":435513, "TATCG":248309, "TATGA":1247260, "TATGT":1879992, "TATGC":658241, "TATGG":1269057, "TACAA":1239938, "TACAT":1510634, "TACAC":958932, "TACAG":2092033, "TACTA":723626, "TACTT":831384, "TACTC":500178, "TACTG":1374684, "TACCA":685452, "TACCT":657549, "TACCC":331231, "TACCG":224629, "TACGA":238080, "TACGT":305070, "TACGC":138620, "TACGG":272042, "TAGAA":1508395, 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"GC":[0.427847,0.42897,0.42203,0.428454,0.422537,0.430813,0.426489,0.429083,0.421916,0.427571,0.424829,0.425412,0.425616,0.42935,0.420996,0.427,0.420412,0.42589,0.42299,0.427387,0.422193,0.428573,0.422964,0.427393,0.424138,0.42873,0.420681,0.429283,0.423213,0.426247,0.425072,0.426771,0.421893,0.429732,0.42325,0.426149,0.422917,0.427082,0.420625,0.427328,0.422479,0.425641,0.421052,0.4266,0.419745,0.427052,0.420153,0.423554,0.422024,0.425717,0.419718,0.425796,0.420382,0.423889,0.421539,0.426055,0.419081,0.424383,0.418272,0.421971,0.421255,0.423762,0.417295,0.424082,0.418683,0.423651,0.418677,0.422847,0.416315,0.422971,0.418266,0.421267,0.419,0.422532,0.415968,0.425261,0.418355,0.421347,0.41884,0.421713,0.417879,0.42413,0.417184,0.420629,0.418992,0.421972] }, "kmer_count": { "AAAAA":2476787, "AAAAT":1615882, "AAAAC":1232654, "AAAAG":916097, "AAATA":1683375, "AAATT":977169, "AAATC":887881, "AAATG":1418077, "AAACA":1861499, "AAACT":1017513, "AAACC":908966, "AAACG":354560, "AAAGA":896784, 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"CCCCA":1103459, "CCCCT":1378606, "CCCCC":1022398, "CCCCG":278847, "CCCGA":164359, "CCCGT":254377, "CCCGC":211541, "CCCGG":172401, "CCGAA":152600, "CCGAT":205844, "CCGAC":207864, "CCGAG":182985, "CCGTA":220829, "CCGTT":272589, "CCGTC":316079, "CCGTG":222996, "CCGCA":198170, "CCGCT":263786, "CCGCC":267501, "CCGCG":65010, "CCGGA":152154, "CCGGT":195107, "CCGGC":160685, "CCGGG":150052, "CGAAA":197225, "CGAAT":165813, "CGAAC":157544, "CGAAG":131470, "CGATA":198262, "CGATT":207137, "CGATC":179932, "CGATG":216338, "CGACA":285358, "CGACT":214705, "CGACC":229573, "CGACG":97256, "CGAGA":224123, "CGAGT":148841, "CGAGC":146548, "CGAGG":165518, "CGTAA":191643, "CGTAT":205744, "CGTAC":197683, "CGTAG":187538, "CGTTA":282365, "CGTTT":413027, "CGTTC":296834, "CGTTG":270647, "CGTCA":317194, "CGTCT":387268, "CGTCC":259145, "CGTCG":91637, "CGTGA":194803, "CGTGT":323692, "CGTGC":191821, "CGTGG":191597, "CGCAA":201831, "CGCAT":193000, "CGCAC":263913, "CGCAG":216650, "CGCTA":230062, "CGCTT":214662, "CGCTC":491809, "CGCTG":318141, "CGCCA":263571, "CGCCT":230721, "CGCCC":265371, "CGCCG":91754, "CGCGA":53220, "CGCGT":66960, "CGCGC":91392, "CGCGG":54748, "CGGAA":213470, "CGGAT":141620, "CGGAC":169174, "CGGAG":196986, "CGGTA":198421, "CGGTT":183317, "CGGTC":192327, "CGGTG":210402, "CGGCA":187451, "CGGCT":197412, "CGGCC":190652, "CGGCG":85741, "CGGGA":149356, "CGGGT":112674, "CGGGC":118372, "CGGGG":126124, "GAAAA":1001175, "GAAAT":914566, "GAAAC":771347, "GAAAG":602021, "GAATA":703074, "GAATT":630230, "GAATC":476180, "GAATG":695002, "GAACA":916609, "GAACT":546569, "GAACC":505437, "GAACG":226370, "GAAGA":694621, "GAAGT":554394, "GAAGC":411278, "GAAGG":449247, "GATAA":543417, "GATAT":673761, "GATAC":476465, "GATAG":365451, "GATTA":553333, "GATTT":893302, "GATTC":477608, "GATTG":537592, "GATCA":579123, "GATCT":586826, "GATCC":393835, "GATCG":200052, "GATGA":712966, "GATGT":813702, "GATGC":462283, "GATGG":495262, "GACAA":816209, "GACAT":932514, "GACAC":958659, "GACAG":909572, "GACTA":608533, "GACTT":587988, "GACTC":606287, "GACTG":782068, "GACCA":802008, "GACCT":573525, "GACCC":576638, "GACCG":161438, "GACGA":237040, "GACGT":225984, "GACGC":164289, "GACGG":182164, "GAGAA":760486, "GAGAT":578541, "GAGAC":646786, "GAGAG":951032, "GAGTA":426506, "GAGTT":495606, "GAGTC":397806, "GAGTG":515983, "GAGCA":526133, "GAGCT":508350, "GAGCC":421766, "GAGCG":185370, "GAGGA":645229, "GAGGT":442467, "GAGGC":380431, "GAGGG":354090, "GTAAA":889707, "GTAAT":761732, "GTAAC":613819, "GTAAG":355691, "GTATA":876950, "GTATT":1012454, "GTATC":596253, "GTATG":653279, "GTACA":904778, "GTACT":666140, "GTACC":541520, "GTACG":157773, "GTAGA":583836, "GTAGT":579371, "GTAGC":457609, "GTAGG":366795, "GTTAA":736398, "GTTAT":842735, "GTTAC":673896, "GTTAG":487447, "GTTTA":935035, "GTTTT":1480243, "GTTTC":996287, "GTTTG":942198, "GTTCA":839995, "GTTCT":1098522, "GTTCC":666279, "GTTCG":143413, "GTTGA":746228, "GTTGT":1024128, "GTTGC":492160, "GTTGG":469042, "GTCAA":720299, "GTCAT":944326, "GTCAC":796020, "GTCAG":746393, "GTCTA":722067, "GTCTT":852632, "GTCTC":1605707, "GTCTG":1231429, "GTCCA":743489, "GTCCT":880286, "GTCCC":674359, "GTCCG":152249, "GTCGA":147501, "GTCGT":218093, "GTCGC":159218, "GTCGG":138962, "GTGAA":688436, "GTGAT":607010, "GTGAC":554181, "GTGAG":449466, "GTGTA":806299, "GTGTT":1194856, "GTGTC":800501, "GTGTG":1739385, "GTGCA":611138, "GTGCT":590278, "GTGCC":438532, "GTGCG":170074, "GTGGA":572643, "GTGGT":579106, "GTGGC":425396, "GTGGG":349966, "GCAAA":646683, "GCAAT":525955, "GCAAC":524216, "GCAAG":402978, "GCATA":506548, "GCATT":745660, "GCATC":566302, "GCATG":573685, "GCACA":828466, "GCACT":596189, "GCACC":509794, "GCACG":181599, "GCAGA":660820, "GCAGT":610324, "GCAGC":656263, "GCAGG":491181, "GCTAA":517507, "GCTAT":586162, "GCTAC":697044, "GCTAG":429930, "GCTTA":344886, "GCTTT":858867, "GCTTC":613758, "GCTTG":420552, "GCTCA":604766, "GCTCT":1087098, "GCTCC":607957, "GCTCG":171960, "GCTGA":631064, "GCTGT":973636, "GCTGC":705161, "GCTGG":500780, "GCCAA":618132, "GCCAT":740186, "GCCAC":631889, "GCCAG":549203, "GCCTA":480086, "GCCTT":634184, "GCCTC":714796, "GCCTG":567978, "GCCCA":568589, "GCCCT":611647, "GCCCC":513760, "GCCCG":137645, "GCCGA":157352, "GCCGT":174847, "GCCGC":167335, "GCCGG":138633, "GCGAA":128693, "GCGAT":127507, "GCGAC":134791, "GCGAG":126427, "GCGTA":116971, "GCGTT":209263, "GCGTC":169105, "GCGTG":186727, "GCGCA":158628, "GCGCT":199520, "GCGCC":143157, "GCGCG":67272, "GCGGA":107464, "GCGGT":141441, "GCGGC":121567, "GCGGG":96984, "GGAAA":717815, "GGAAT":532805, "GGAAC":465971, "GGAAG":487777, "GGATA":382448, "GGATT":489073, "GGATC":355984, "GGATG":467169, "GGACA":710674, "GGACT":474642, "GGACC":391163, "GGACG":163829, "GGAGA":642975, "GGAGT":416549, "GGAGC":374111, "GGAGG":484198, "GGTAA":448020, "GGTAT":458045, "GGTAC":394938, "GGTAG":337912, "GGTTA":458947, "GGTTT":652845, "GGTTC":370727, "GGTTG":435361, "GGTCA":587499, "GGTCT":537382, "GGTCC":364756, "GGTCG":126097, "GGTGA":456147, "GGTGT":635846, "GGTGC":329632, "GGTGG":402205, "GGCAA":410008, "GGCAT":435344, "GGCAC":381810, "GGCAG":475712, "GGCTA":483049, "GGCTT":442227, "GGCTC":424783, "GGCTG":567529, "GGCCA":550616, "GGCCT":497921, "GGCCC":361969, "GGCCG":147209, "GGCGA":127842, "GGCGT":126295, "GGCGC":126981, "GGCGG":134269, "GGGAA":431537, "GGGAT":344425, "GGGAC":321953, "GGGAG":362484, "GGGTA":295409, "GGGTT":352834, "GGGTC":270575, "GGGTG":336244, "GGGCA":298708, "GGGCT":301385, "GGGCC":288970, "GGGCG":99113, "GGGGA":300054, "GGGGT":262003, "GGGGC":201202, "GGGGG":264937 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212403_sample_1703752_S117_L001_R1_001.fastq.gz --in2 lib_212403_sample_1703752_S117_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212403_sample_1703752_S117_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212403_sample_1703752_S117_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212403_sample_1703752_S117_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212403_sample_1703752_S117_L001_R2_001.fastp-trim.fq.gz " }