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"GC":[0.667577,0.506755,0.40548,0.436798,0.414338,0.414137,0.341254,0.428018,0.474011,0.351425,0.514196,0.491278,0.425337,0.424062,0.410835,0.422657,0.442829,0.412994,0.437081,0.420005,0.435916,0.416833,0.429284,0.42598,0.421247,0.437751,0.433356,0.413525,0.446434,0.410664,0.431852,0.419863,0.434065,0.429931,0.442032,0.412335,0.433503,0.436589,0.435833,0.426441,0.429349,0.412565,0.425722,0.423669,0.420344,0.431487,0.437232,0.427602,0.437292,0.423732,0.421018,0.412645,0.445495,0.430204,0.43641,0.436899,0.421412,0.429083,0.43169,0.415763,0.43777,0.426783,0.438559,0.434916,0.438837,0.417134,0.442021,0.429079,0.425181,0.419419,0.436986,0.431576,0.439253,0.443437,0.442147,0.436399,0.448878,0.434241,0.44154,0.444321,0.441826,0.436998,0.45093,0.436909,0.447468,0.448343,0.44578,0.442229,0.45691,0.440025,0.449213,0.450251,0.447276,0.444375,0.456447,0.44466,0.450487,0.452047,0.450669,0.444848,0.46163] }, "kmer_count": { "AAAAA":3637102, "AAAAT":2346283, "AAAAC":1647787, "AAAAG":1933712, 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"AGGTT":1210806, "AGGTC":646452, "AGGTG":1412572, "AGGCA":961522, "AGGCT":827709, "AGGCC":539426, "AGGCG":250659, "AGGGA":1918424, "AGGGT":1609870, "AGGGC":607748, "AGGGG":1846027, "TAAAA":2128188, "TAAAT":1644961, "TAAAC":1000010, "TAAAG":1223726, "TAATA":1312539, "TAATT":1044562, "TAATC":938646, "TAATG":1628122, "TAACA":1360519, "TAACT":779805, "TAACC":458320, "TAACG":295215, "TAAGA":980806, "TAAGT":741050, "TAAGC":372499, "TAAGG":871549, "TATAA":1269594, "TATAT":1914927, "TATAC":898138, "TATAG":1519279, "TATTA":1197830, "TATTT":1772301, "TATTC":741496, "TATTG":1276267, "TATCA":820270, "TATCT":676741, "TATCC":382597, "TATCG":227386, "TATGA":1061793, "TATGT":1843989, "TATGC":762130, "TATGG":1148146, "TACAA":1116074, "TACAT":1322984, "TACAC":821834, "TACAG":1654925, "TACTA":672550, "TACTT":780064, "TACTC":435271, "TACTG":1189073, "TACCA":637617, "TACCT":587384, "TACCC":287352, "TACCG":188620, "TACGA":219354, "TACGT":281162, "TACGC":123455, "TACGG":258563, "TAGAA":1326493, 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"CACAG":1312261, "CACTA":636049, "CACTT":687124, "CACTC":491604, "CACTG":1009318, "CACCA":765359, "CACCT":547198, "CACCC":320582, "CACCG":228036, "CACGA":232349, "CACGT":1379249, "CACGC":738201, "CACGG":256680, "CAGAA":1432496, "CAGAT":1538358, "CAGAC":1218871, "CAGAG":2468629, "CAGTA":1491006, "CAGTT":1145195, "CAGTC":1431333, "CAGTG":1692150, "CAGCA":1203859, "CAGCT":1578723, "CAGCC":556785, "CAGCG":367386, "CAGGA":1197676, "CAGGT":1118622, "CAGGC":581161, "CAGGG":1126458, "CTAAA":891881, "CTAAT":611221, "CTAAC":504401, "CTAAG":448060, "CTATA":936984, "CTATT":721554, "CTATC":342252, "CTATG":769012, "CTACA":855477, "CTACT":537796, "CTACC":341435, "CTACG":202643, "CTAGA":695418, "CTAGT":781530, "CTAGC":435969, "CTAGG":565090, "CTTAA":568941, "CTTAT":555954, "CTTAC":356500, "CTTAG":343566, "CTTTA":817278, "CTTTT":943942, "CTTTC":636860, "CTTTG":875051, "CTTCA":833132, "CTTCT":874746, "CTTCC":459191, "CTTCG":178568, "CTTGA":902525, "CTTGT":910586, "CTTGC":462547, "CTTGG":696055, 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"GC":[0.426357,0.428194,0.422294,0.429794,0.422241,0.429103,0.433666,0.428812,0.420651,0.430741,0.427567,0.423406,0.427007,0.432583,0.419852,0.425257,0.423528,0.42587,0.422883,0.427848,0.42038,0.429076,0.420798,0.429385,0.423634,0.427373,0.418282,0.435474,0.42185,0.427119,0.42393,0.430868,0.417569,0.432753,0.4249,0.425643,0.419835,0.430311,0.420643,0.42727,0.422386,0.426207,0.419871,0.425966,0.420683,0.427991,0.417856,0.424729,0.426835,0.426376,0.417814,0.427572,0.421967,0.422023,0.423626,0.428886,0.417353,0.423733,0.421038,0.423594,0.420946,0.42588,0.415862,0.424126,0.418772,0.425496,0.421207,0.422885,0.415758,0.430434,0.419365,0.422001,0.420402,0.427194,0.413912,0.42795,0.42133,0.421889,0.418137,0.426447,0.418693,0.426624,0.41831,0.422473,0.418607,0.423987] }, "kmer_count": { "AAAAA":2155367, "AAAAT":1452773, "AAAAC":1251231, "AAAAG":818616, "AAATA":1505563, "AAATT":905962, "AAATC":799716, "AAATG":1307454, "AAACA":1853574, "AAACT":950250, "AAACC":935459, "AAACG":325542, 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"CCCCC":858526, "CCCCG":262120, "CCCGA":156482, "CCCGT":231119, "CCCGC":186425, "CCCGG":155900, "CCGAA":146633, "CCGAT":201017, "CCGAC":201867, "CCGAG":175885, "CCGTA":207013, "CCGTT":240662, "CCGTC":269339, "CCGTG":208701, "CCGCA":196547, "CCGCT":251544, "CCGCC":234447, "CCGCG":63359, "CCGGA":140332, "CCGGT":161974, "CCGGC":156525, "CCGGG":130277, "CGAAA":193880, "CGAAT":147822, "CGAAC":159311, "CGAAG":129783, "CGATA":180091, "CGATT":197985, "CGATC":163934, "CGATG":198453, "CGACA":339055, "CGACT":194290, "CGACC":230421, "CGACG":103506, "CGAGA":218326, "CGAGT":135950, "CGAGC":137367, "CGAGG":155116, "CGTAA":185531, "CGTAT":181271, "CGTAC":187772, "CGTAG":173964, "CGTTA":256086, "CGTTT":363320, "CGTTC":251017, "CGTTG":241969, "CGTCA":286803, "CGTCT":334703, "CGTCC":237261, "CGTCG":82501, "CGTGA":172170, "CGTGT":282184, "CGTGC":173502, "CGTGG":175229, "CGCAA":213545, "CGCAT":175103, "CGCAC":259546, "CGCAG":200247, "CGCTA":226877, "CGCTT":198837, "CGCTC":458802, "CGCTG":307491, "CGCCA":251038, "CGCCT":205561, "CGCCC":234832, "CGCCG":84197, "CGCGA":49896, "CGCGT":59491, "CGCGC":90886, "CGCGG":48836, "CGGAA":204674, "CGGAT":130183, "CGGAC":155082, "CGGAG":186425, "CGGTA":169054, "CGGTT":163541, "CGGTC":168772, "CGGTG":192906, "CGGCA":187638, "CGGCT":185771, "CGGCC":175443, "CGGCG":80190, "CGGGA":133288, "CGGGT":97624, "CGGGC":102380, "CGGGG":111221, "GAAAA":891712, "GAAAT":841710, "GAAAC":702681, "GAAAG":553472, "GAATA":607914, "GAATT":576649, "GAATC":411267, "GAATG":615765, "GAACA":871583, "GAACT":514435, "GAACC":467882, "GAACG":218878, "GAAGA":656809, "GAAGT":514451, "GAAGC":401501, "GAAGG":430266, "GATAA":473383, "GATAT":594632, "GATAC":435096, "GATAG":304427, "GATTA":503312, "GATTT":802503, "GATTC":441551, "GATTG":472828, "GATCA":546046, "GATCT":533290, "GATCC":380287, "GATCG":203477, "GATGA":663588, "GATGT":715664, "GATGC":437070, "GATGG":450127, "GACAA":891883, "GACAT":841842, "GACAC":1025614, "GACAG":872563, "GACTA":523958, "GACTT":542684, "GACTC":542429, "GACTG":698463, "GACCA":770139, "GACCT":535101, "GACCC":494553, "GACCG":158254, "GACGA":235474, "GACGT":206700, "GACGC":154778, "GACGG":172731, "GAGAA":704044, "GAGAT":536823, "GAGAC":654675, "GAGAG":923570, "GAGTA":376298, "GAGTT":439955, "GAGTC":359844, "GAGTG":435198, "GAGCA":463288, "GAGCT":471598, "GAGCC":385897, "GAGCG":169216, "GAGGA":594302, "GAGGT":399181, "GAGGC":354383, "GAGGG":322428, "GTAAA":786562, "GTAAT":679665, "GTAAC":544624, "GTAAG":310427, "GTATA":718983, "GTATT":880012, "GTATC":493038, "GTATG":550793, "GTACA":881107, "GTACT":628290, "GTACC":511213, "GTACG":149594, "GTAGA":482624, "GTAGT":468511, "GTAGC":407230, "GTAGG":311833, "GTTAA":642526, "GTTAT":733328, "GTTAC":607108, "GTTAG":419039, "GTTTA":831909, "GTTTT":1345461, "GTTTC":796245, "GTTTG":841646, "GTTCA":766269, "GTTCT":872899, "GTTCC":625436, "GTTCG":131910, "GTTGA":635107, "GTTGT":835656, "GTTGC":525271, "GTTGG":408796, "GTCAA":677523, "GTCAT":848820, "GTCAC":678590, "GTCAG":645417, "GTCTA":604057, "GTCTT":752669, "GTCTC":1294604, "GTCTG":1032152, "GTCCA":670934, "GTCCT":735331, "GTCCC":567683, "GTCCG":153953, "GTCGA":137282, "GTCGT":188617, "GTCGC":141200, "GTCGG":119687, "GTGAA":618292, "GTGAT":534585, "GTGAC":502485, "GTGAG":389260, "GTGTA":686534, "GTGTT":1024544, "GTGTC":716393, "GTGTG":1716212, "GTGCA":538415, "GTGCT":525935, "GTGCC":386860, "GTGCG":149156, "GTGGA":526215, "GTGGT":489810, "GTGGC":379909, "GTGGG":292921, "GCAAA":599803, "GCAAT":482852, "GCAAC":607130, "GCAAG":396181, "GCATA":439608, "GCATT":679521, "GCATC":494630, "GCATG":483185, "GCACA":793686, "GCACT":536852, "GCACC":476703, "GCACG":162624, "GCAGA":571543, "GCAGT":532150, "GCAGC":709216, "GCAGG":435203, "GCTAA":479878, "GCTAT":531962, "GCTAC":692867, "GCTAG":374159, "GCTTA":306700, "GCTTT":774769, "GCTTC":599038, "GCTTG":362086, "GCTCA":553095, "GCTCT":1027696, "GCTCC":1034289, "GCTCG":177428, "GCTGA":591597, "GCTGT":884596, "GCTGC":1082320, "GCTGG":547291, "GCCAA":581682, "GCCAT":682552, "GCCAC":616191, "GCCAG":472543, "GCCTA":439994, "GCCTT":593482, "GCCTC":588460, "GCCTG":491105, "GCCCA":539375, "GCCCT":504622, "GCCCC":472363, "GCCCG":124678, "GCCGA":149457, "GCCGT":157323, "GCCGC":155436, "GCCGG":124302, "GCGAA":126387, "GCGAT":117363, "GCGAC":125747, "GCGAG":111634, "GCGTA":105293, "GCGTT":179333, "GCGTC":152251, "GCGTG":157238, "GCGCA":148449, "GCGCT":187723, "GCGCC":129012, "GCGCG":62965, "GCGGA":98934, "GCGGT":124497, "GCGGC":115829, "GCGGG":82367, "GGAAA":677453, "GGAAT":468589, "GGAAC":447648, "GGAAG":442764, "GGATA":340188, "GGATT":445643, "GGATC":329104, "GGATG":435787, "GGACA":777491, "GGACT":438941, "GGACC":357308, "GGACG":159768, "GGAGA":605592, "GGAGT":383452, "GGAGC":349973, "GGAGG":440445, "GGTAA":381029, "GGTAT":403896, "GGTAC":396913, "GGTAG":291627, "GGTTA":395714, "GGTTT":577988, "GGTTC":340077, "GGTTG":370751, "GGTCA":543414, "GGTCT":528496, "GGTCC":326158, "GGTCG":109204, "GGTGA":418476, "GGTGT":566367, "GGTGC":297787, "GGTGG":349038, "GGCAA":393154, "GGCAT":399001, "GGCAC":358990, "GGCAG":435057, "GGCTA":436210, "GGCTT":397039, "GGCTC":386688, "GGCTG":491541, "GGCCA":502141, "GGCCT":456777, "GGCCC":325867, "GGCCG":140203, "GGCGA":123601, "GGCGT":111114, "GGCGC":115368, "GGCGG":116324, "GGGAA":388609, "GGGAT":303490, "GGGAC":295316, "GGGAG":326030, "GGGTA":257437, "GGGTT":301298, "GGGTC":234707, "GGGTG":280884, "GGGCA":284395, "GGGCT":259519, "GGGCC":251955, "GGGCG":82782, "GGGGA":274560, "GGGGT":220406, "GGGGC":179409, "GGGGG":218115 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212402_sample_1703697_S108_L001_R1_001.fastq.gz --in2 lib_212402_sample_1703697_S108_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212402_sample_1703697_S108_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212402_sample_1703697_S108_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212402_sample_1703697_S108_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212402_sample_1703697_S108_L001_R2_001.fastp-trim.fq.gz " }