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"GC":[0.409562,0.431848,0.416372,0.424845,0.423616,0.42386,0.420098,0.432054,0.413663,0.424131,0.426919,0.420564,0.416747,0.435247,0.415475,0.420264,0.424915,0.422591,0.41905,0.431071,0.416515,0.42138,0.425406,0.424647,0.415586,0.433712,0.416551,0.428963,0.427726,0.422502,0.420132,0.434556,0.415385,0.423859,0.426476,0.423544,0.413782,0.433314,0.417676,0.421688,0.424487,0.420087,0.415174,0.429802,0.414603,0.422455,0.424361,0.422617,0.421718,0.434088,0.414885,0.426826,0.428063,0.423277,0.414489,0.433409,0.415714,0.419958,0.427586,0.424457,0.417295,0.42986,0.413865,0.419784,0.424462,0.419869,0.415173,0.429519,0.415314,0.423558,0.426124,0.420966,0.416044,0.432939,0.413093,0.421297,0.424835,0.41981,0.415899,0.429525,0.415821,0.42011,0.420785,0.417891,0.410149,0.428168] }, "kmer_count": { "AAAAA":2741093, "AAAAT":1848644, "AAAAC":1282595, "AAAAG":1394781, "AAATA":1964935, "AAATT":968774, "AAATC":736955, "AAATG":1611472, "AAACA":1955984, "AAACT":818614, "AAACC":547235, "AAACG":405734, 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"GC":[0.424329,0.42653,0.420831,0.426717,0.421518,0.426624,0.432505,0.426276,0.419277,0.427764,0.426279,0.42083,0.425519,0.430638,0.418174,0.422635,0.422157,0.424259,0.420975,0.425858,0.418877,0.427504,0.419523,0.427569,0.421741,0.425438,0.416364,0.432925,0.421483,0.424414,0.422693,0.42846,0.416522,0.430004,0.423429,0.423692,0.418649,0.428747,0.419432,0.424738,0.420702,0.423606,0.419169,0.423745,0.418252,0.426231,0.416224,0.4223,0.42594,0.424189,0.416803,0.424309,0.420591,0.41836,0.422244,0.426256,0.415054,0.420835,0.420221,0.421186,0.419422,0.422778,0.414483,0.420875,0.416662,0.422919,0.418613,0.420675,0.4138,0.428772,0.417741,0.418417,0.418248,0.424735,0.412261,0.425842,0.419392,0.418942,0.415088,0.424022,0.417076,0.4224,0.415877,0.418881,0.416231,0.420619] }, "kmer_count": { "AAAAA":2083364, "AAAAT":1373953, "AAAAC":1179304, "AAAAG":745057, "AAATA":1423148, "AAATT":849741, "AAATC":752403, "AAATG":1225013, "AAACA":1699369, "AAACT":895807, "AAACC":908976, "AAACG":300130, 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"TAAAT":1104602, "TAAAC":969915, "TAAAG":655973, "TAATA":1035341, "TAATT":945817, "TAATC":632899, "TAATG":854790, "TAACA":1297279, "TAACT":854389, "TAACC":1212290, "TAACG":207481, "TAAGA":439192, "TAAGT":443337, "TAAGC":289138, "TAAGG":274233, "TATAA":961913, "TATAT":1840455, "TATAC":921754, "TATAG":755340, "TATTA":1122305, "TATTT":1906439, "TATTC":945492, "TATTG":891403, "TATCA":1215842, "TATCT":1276449, "TATCC":763195, "TATCG":218320, "TATGA":665577, "TATGT":998304, "TATGC":495789, "TATGG":460912, "TACAA":1246041, "TACAT":1443143, "TACAC":1388951, "TACAG":1113974, "TACTA":1796383, "TACTT":953649, "TACTC":907989, "TACTG":1244819, "TACCA":1281267, "TACCT":1116380, "TACCC":956166, "TACCG":245152, "TACGA":221883, "TACGT":227585, "TACGC":145786, "TACGG":135797, "TAGAA":637837, "TAGAT":509635, "TAGAC":534344, "TAGAG":402445, "TAGTA":552977, "TAGTT":689385, "TAGTC":594941, "TAGTG":504276, "TAGCA":533391, "TAGCT":655843, "TAGCC":547307, "TAGCG":116698, "TAGGA":386046, "TAGGT":346588, 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"TGGTA":578019, "TGGTT":659266, "TGGTC":611551, "TGGTG":624116, "TGGCA":563732, "TGGCT":598616, "TGGCC":466324, "TGGCG":130263, "TGGGA":411994, "TGGGT":372576, "TGGGC":284196, "TGGGG":261011, "CAAAA":1249736, "CAAAT":995113, "CAAAC":1051529, "CAAAG":682733, "CAATA":968639, "CAATT":811593, "CAATC":678442, "CAATG":905068, "CAACA":2967378, "CAACT":1321775, "CAACC":1571149, "CAACG":297600, "CAAGA":635044, "CAAGT":574300, "CAAGC":480751, "CAAGG":485877, "CATAA":852325, "CATAT":1037487, "CATAC":1020404, "CATAG":600721, "CATTA":1386499, "CATTT":1602286, "CATTC":1079515, "CATTG":943421, "CATCA":1356203, "CATCT":1377561, "CATCC":947860, "CATCG":301929, "CATGA":736062, "CATGT":1068605, "CATGC":610671, "CATGG":582587, "CACAA":1661892, "CACAT":1511943, "CACAC":5043161, "CACAG":1763753, "CACTA":1525232, "CACTT":902642, "CACTC":1326690, "CACTG":1332502, "CACCA":1501107, "CACCT":1077299, "CACCC":863392, "CACCG":274779, "CACGA":195400, "CACGT":294372, "CACGC":322333, "CACGG":192182, "CAGAA":837557, "CAGAT":741788, "CAGAC":939838, "CAGAG":808420, "CAGTA":991609, "CAGTT":915443, "CAGTC":907161, "CAGTG":787990, "CAGCA":1015847, "CAGCT":1458898, "CAGCC":728979, "CAGCG":214067, "CAGGA":636457, "CAGGT":621665, "CAGGC":473950, "CAGGG":381585, "CTAAA":850336, "CTAAT":735863, "CTAAC":993034, "CTAAG":277138, "CTATA":1218491, "CTATT":1041844, "CTATC":1142955, "CTATG":618014, "CTACA":1653179, "CTACT":2289654, "CTACC":1598126, "CTACG":238159, "CTAGA":449483, "CTAGT":592350, "CTAGC":489290, "CTAGG":330225, "CTTAA":607507, "CTTAT":760251, "CTTAC":614549, "CTTAG":340599, "CTTTA":975302, "CTTTT":1295720, "CTTTC":1428116, "CTTTG":873018, "CTTCA":1206212, "CTTCT":1570891, "CTTCC":1033694, "CTTCG":187289, "CTTGA":539585, "CTTGT":712488, "CTTGC":428831, "CTTGG":344705, "CTCAA":995802, "CTCAT":1088988, "CTCAC":1342459, "CTCAG":817970, "CTCTA":1566483, "CTCTT":1669994, "CTCTC":7192491, "CTCTG":1885994, "CTCCA":1514260, "CTCCT":1976789, "CTCCC":1571561, "CTCCG":249529, "CTCGA":151051, "CTCGT":243882, 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"CCCCG":239099, "CCCGA":142761, "CCCGT":210580, "CCCGC":176395, "CCCGG":138993, "CCGAA":135123, "CCGAT":186623, "CCGAC":232046, "CCGAG":155260, "CCGTA":186878, "CCGTT":277054, "CCGTC":254873, "CCGTG":185087, "CCGCA":181943, "CCGCT":238872, "CCGCC":216354, "CCGCG":53905, "CCGGA":122899, "CCGGT":145676, "CCGGC":140024, "CCGGG":110814, "CGAAA":177591, "CGAAT":138910, "CGAAC":135047, "CGAAG":121809, "CGATA":167537, "CGATT":183368, "CGATC":153057, "CGATG":180318, "CGACA":305311, "CGACT":230033, "CGACC":212775, "CGACG":90174, "CGAGA":201519, "CGAGT":121021, "CGAGC":121076, "CGAGG":134368, "CGTAA":171526, "CGTAT":172229, "CGTAC":167407, "CGTAG":161723, "CGTTA":239513, "CGTTT":398067, "CGTTC":235397, "CGTTG":230792, "CGTCA":269907, "CGTCT":319600, "CGTCC":218744, "CGTCG":78049, "CGTGA":153879, "CGTGT":262812, "CGTGC":160789, "CGTGG":155239, "CGCAA":194682, "CGCAT":160688, "CGCAC":228775, "CGCAG":177402, "CGCTA":212394, "CGCTT":189456, "CGCTC":455902, "CGCTG":281917, "CGCCA":228668, "CGCCT":189123, "CGCCC":220681, "CGCCG":73869, "CGCGA":44269, "CGCGT":51187, "CGCGC":80410, "CGCGG":43487, "CGGAA":195605, "CGGAT":116658, "CGGAC":137269, "CGGAG":162117, "CGGTA":156540, "CGGTT":150216, "CGGTC":151525, "CGGTG":172597, "CGGCA":168299, "CGGCT":167218, "CGGCC":152422, "CGGCG":69473, "CGGGA":114847, "CGGGT":86066, "CGGGC":88421, "CGGGG":95815, "GAAAA":816712, "GAAAT":778492, "GAAAC":627342, "GAAAG":490070, "GAATA":566801, "GAATT":536423, "GAATC":382265, "GAATG":563279, "GAACA":783863, "GAACT":462506, "GAACC":434010, "GAACG":195160, "GAAGA":582515, "GAAGT":475299, "GAAGC":366605, "GAAGG":368056, "GATAA":445045, "GATAT":559414, "GATAC":394444, "GATAG":287045, "GATTA":485374, "GATTT":751180, "GATTC":408164, "GATTG":429586, "GATCA":505019, "GATCT":489994, "GATCC":349243, "GATCG":196414, "GATGA":593926, "GATGT":664869, "GATGC":400647, "GATGG":397670, "GACAA":801450, "GACAT":790140, "GACAC":898943, "GACAG":718275, "GACTA":485211, "GACTT":504318, "GACTC":561649, "GACTG":685068, "GACCA":703194, "GACCT":480250, "GACCC":476237, "GACCG":139778, "GACGA":204433, "GACGT":186815, "GACGC":139801, "GACGG":149306, "GAGAA":608803, "GAGAT":483310, "GAGAC":549712, "GAGAG":733570, "GAGTA":344376, "GAGTT":404493, "GAGTC":319906, "GAGTG":393010, "GAGCA":416847, "GAGCT":418830, "GAGCC":339347, "GAGCG":156377, "GAGGA":504360, "GAGGT":364488, "GAGGC":307280, "GAGGG":261246, "GTAAA":751986, "GTAAT":642844, "GTAAC":554211, "GTAAG":293832, "GTATA":687674, "GTATT":833770, "GTATC":510224, "GTATG":520061, "GTACA":822614, "GTACT":679657, "GTACC":535055, "GTACG":137561, "GTAGA":437090, "GTAGT":445173, "GTAGC":374572, "GTAGG":288664, "GTTAA":604323, "GTTAT":687307, "GTTAC":634976, "GTTAG":387292, "GTTTA":830846, "GTTTT":1270671, "GTTTC":789434, "GTTTG":829007, "GTTCA":736139, "GTTCT":846570, "GTTCC":589945, "GTTCG":128788, "GTTGA":582039, "GTTGT":799044, "GTTGC":486521, "GTTGG":375140, "GTCAA":632501, "GTCAT":813958, "GTCAC":639538, "GTCAG":601270, "GTCTA":613335, "GTCTT":712447, "GTCTC":1304035, "GTCTG":936053, "GTCCA":637256, "GTCCT":707912, "GTCCC":534005, "GTCCG":187388, "GTCGA":127536, "GTCGT":180188, "GTCGC":133177, "GTCGG":107633, "GTGAA":567279, "GTGAT":496047, "GTGAC":464780, "GTGAG":344223, "GTGTA":665878, "GTGTT":995129, "GTGTC":660939, "GTGTG":1537911, "GTGCA":496086, "GTGCT":485469, "GTGCC":367906, "GTGCG":131736, "GTGGA":469381, "GTGGT":449141, "GTGGC":340652, "GTGGG":257875, "GCAAA":552390, "GCAAT":446767, "GCAAC":562713, "GCAAG":350832, "GCATA":413699, "GCATT":637756, "GCATC":456398, "GCATG":440857, "GCACA":766912, "GCACT":504689, "GCACC":449950, "GCACG":144648, "GCAGA":507473, "GCAGT":491397, "GCAGC":632566, "GCAGG":386735, "GCTAA":499511, "GCTAT":501039, "GCTAC":660860, "GCTAG":335668, "GCTTA":288708, "GCTTT":734811, "GCTTC":574858, "GCTTG":336761, "GCTCA":523263, "GCTCT":1007556, "GCTCC":971254, "GCTCG":167750, "GCTGA":534611, "GCTGT":840534, "GCTGC":1012409, "GCTGG":492465, "GCCAA":532154, "GCCAT":621439, "GCCAC":569096, "GCCAG":421189, "GCCTA":405110, "GCCTT":550535, "GCCTC":591630, "GCCTG":442568, "GCCCA":500628, "GCCCT":462116, "GCCCC":449344, "GCCCG":110674, "GCCGA":132826, "GCCGT":141000, "GCCGC":139641, "GCCGG":106526, "GCGAA":111005, "GCGAT":106550, "GCGAC":110785, "GCGAG":94669, "GCGTA":95368, "GCGTT":163142, "GCGTC":141844, "GCGTG":139419, "GCGCA":128190, "GCGCT":170250, "GCGCC":115336, "GCGCG":54535, "GCGGA":86771, "GCGGT":110882, "GCGGC":100722, "GCGGG":71099, "GGAAA":609998, "GGAAT":428810, "GGAAC":404404, "GGAAG":393926, "GGATA":316979, "GGATT":405352, "GGATC":295787, "GGATG":384325, "GGACA":678671, "GGACT":390227, "GGACC":325015, "GGACG":136996, "GGAGA":516557, "GGAGT":340299, "GGAGC":308372, "GGAGG":367106, "GGTAA":353363, "GGTAT":374562, "GGTAC":439482, "GGTAG":257339, "GGTTA":374902, "GGTTT":554224, "GGTTC":315648, "GGTTG":333212, "GGTCA":498236, "GGTCT":482778, "GGTCC":295072, "GGTCG":99227, "GGTGA":385732, "GGTGT":520198, "GGTGC":267002, "GGTGG":306502, "GGCAA":352164, "GGCAT":361788, "GGCAC":322481, "GGCAG":379739, "GGCTA":396250, "GGCTT":368240, "GGCTC":348611, "GGCTG":434697, "GGCCA":449866, "GGCCT":409888, "GGCCC":291775, "GGCCG":121565, "GGCGA":106676, "GGCGT":98115, "GGCGC":101518, "GGCGG":97193, "GGGAA":340597, "GGGAT":263317, "GGGAC":253349, "GGGAG":266145, "GGGTA":227153, "GGGTT":268853, "GGGTC":206716, "GGGTG":245350, "GGGCA":246708, "GGGCT":228250, "GGGCC":222347, "GGGCG":69946, "GGGGA":227616, "GGGGT":190452, "GGGGC":152370, "GGGGG":201224 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212401_sample_1703678_S100_L002_R1_001.fastq.gz --in2 lib_212401_sample_1703678_S100_L002_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212401_sample_1703678_S100_L002.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212401_sample_1703678_S100_L002.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212401_sample_1703678_S100_L002_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212401_sample_1703678_S100_L002_R2_001.fastp-trim.fq.gz " }