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"GC":[0.669604,0.508793,0.406185,0.434419,0.412276,0.414268,0.339322,0.430264,0.470451,0.350205,0.512307,0.489173,0.423655,0.421808,0.409706,0.41899,0.441645,0.413316,0.433491,0.420885,0.432602,0.416441,0.428897,0.423143,0.420412,0.437157,0.430287,0.413164,0.445223,0.41133,0.427964,0.421368,0.431125,0.414194,0.426994,0.412369,0.430055,0.435612,0.43286,0.424002,0.442676,0.413107,0.438381,0.425934,0.419343,0.430406,0.436474,0.426199,0.43492,0.424993,0.420821,0.41136,0.443876,0.428444,0.432576,0.435527,0.419143,0.42643,0.430882,0.414866,0.433762,0.426403,0.435446,0.433013,0.437696,0.415856,0.438821,0.429736,0.424174,0.418729,0.437465,0.429728,0.435955,0.443036,0.440177,0.43355,0.447205,0.431083,0.437772,0.443186,0.439154,0.434319,0.449219,0.435796,0.44537,0.447921,0.443404,0.43866,0.455404,0.437211,0.446022,0.4485,0.444553,0.441422,0.454538,0.442719,0.447147,0.45022,0.446576,0.441235,0.459684] }, "kmer_count": { "AAAAA":3197163, "AAAAT":2077837, "AAAAC":1462540, "AAAAG":1710700, 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"AGGTC":560346, "AGGTG":1310050, "AGGCA":853506, "AGGCT":727201, "AGGCC":462685, "AGGCG":219243, "AGGGA":1745187, "AGGGT":1548797, "AGGGC":542521, "AGGGG":1743245, "TAAAA":1889085, "TAAAT":1480194, "TAAAC":891456, "TAAAG":1105007, "TAATA":1198120, "TAATT":957284, "TAATC":530598, "TAATG":1568927, "TAACA":1252723, "TAACT":692944, "TAACC":399209, "TAACG":260374, "TAAGA":882977, "TAAGT":666101, "TAAGC":328071, "TAAGG":805254, "TATAA":1154211, "TATAT":1773162, "TATAC":798924, "TATAG":1430035, "TATTA":1108703, "TATTT":1590770, "TATTC":653235, "TATTG":1148928, "TATCA":722096, "TATCT":610490, "TATCC":344895, "TATCG":202627, "TATGA":986888, "TATGT":1635766, "TATGC":684539, "TATGG":1044861, "TACAA":995893, "TACAT":1182078, "TACAC":744388, "TACAG":1542745, "TACTA":608415, "TACTT":691370, "TACTC":391264, "TACTG":1125326, "TACCA":589500, "TACCT":520253, "TACCC":258705, "TACCG":163036, "TACGA":196274, "TACGT":250933, "TACGC":105395, "TACGG":219618, "TAGAA":1237048, "TAGAT":1555568, "TAGAC":749311, 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"CACTC":429352, "CACTG":891104, "CACCA":696374, "CACCT":480527, "CACCC":280389, "CACCG":194971, "CACGA":197816, "CACGT":1249752, "CACGC":161586, "CACGG":215316, "CAGAA":1276672, "CAGAT":1391828, "CAGAC":1041387, "CAGAG":2198617, "CAGTA":1497704, "CAGTT":1034805, "CAGTC":1319123, "CAGTG":1519242, "CAGCA":1073036, "CAGCT":1517165, "CAGCC":482353, "CAGCG":315562, "CAGGA":1085832, "CAGGT":1012108, "CAGGC":506413, "CAGGG":1077534, "CTAAA":794512, "CTAAT":543305, "CTAAC":449944, "CTAAG":401890, "CTATA":852292, "CTATT":645812, "CTATC":303338, "CTATG":679550, "CTACA":771141, "CTACT":481758, "CTACC":306924, "CTACG":183575, "CTAGA":621820, "CTAGT":675350, "CTAGC":378017, "CTAGG":516202, "CTTAA":503061, "CTTAT":491624, "CTTAC":324388, "CTTAG":302726, "CTTTA":732360, "CTTTT":829891, "CTTTC":563772, "CTTTG":767465, "CTTCA":729436, "CTTCT":778772, "CTTCC":401667, "CTTCG":156514, "CTTGA":800621, "CTTGT":793385, "CTTGC":400904, "CTTGG":604359, "CTCAA":691120, "CTCAT":567963, "CTCAC":377855, 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"GC":[0.682981,0.487413,0.439043,0.466905,0.442027,0.409423,0.426962,0.469828,0.48012,0.393651,0.539859,0.498333,0.447549,0.435203,0.439783,0.434511,0.436948,0.431139,0.438366,0.431772,0.437966,0.441963,0.438511,0.428715,0.439295,0.437012,0.431606,0.435441,0.441749,0.427118,0.432361,0.431559,0.432067,0.429367,0.433404,0.427261,0.43678,0.42844,0.435801,0.430675,0.434039,0.424466,0.442743,0.42847,0.433497,0.429268,0.433995,0.421237,0.43489,0.42561,0.42738,0.420549,0.43337,0.425097,0.432706,0.426999,0.433054,0.429144,0.435119,0.429547,0.439065,0.429154,0.436978,0.439502,0.439534,0.430583,0.439435,0.435478,0.433992,0.436006,0.43965,0.42676,0.431274,0.428846,0.430607,0.427708,0.432498,0.424571,0.43324,0.430209,0.438519,0.434824,0.439103,0.43357,0.448571,0.43906,0.441408,0.440317,0.448098,0.436277,0.449815,0.44427,0.443815,0.440965,0.449842,0.442964,0.449418,0.44392,0.447135,0.444732,0.450734] }, "kmer_count": { "AAAAA":3054312, "AAAAT":1548027, "AAAAC":1426892, "AAAAG":893076, 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"GC":[0.409643,0.432421,0.416989,0.424077,0.424846,0.423122,0.42031,0.432617,0.413961,0.423857,0.428217,0.420876,0.41676,0.436228,0.415212,0.418752,0.425396,0.421918,0.417931,0.43074,0.415798,0.420181,0.426337,0.423108,0.414466,0.433408,0.416195,0.428863,0.429504,0.422152,0.420723,0.435625,0.415845,0.424431,0.42782,0.423342,0.413618,0.433845,0.417683,0.421474,0.424989,0.419959,0.415083,0.431347,0.415617,0.42189,0.425597,0.423341,0.421186,0.436389,0.415699,0.426385,0.429731,0.42311,0.416348,0.434421,0.416158,0.421131,0.42893,0.425132,0.417999,0.431876,0.41423,0.420338,0.426391,0.420593,0.415789,0.431291,0.416529,0.426137,0.428762,0.422878,0.417607,0.435223,0.414194,0.423197,0.42657,0.420785,0.417455,0.431445,0.417393,0.421565,0.424208,0.419483,0.411697,0.431606] }, "kmer_count": { "AAAAA":2554449, "AAAAT":1721210, "AAAAC":1208940, "AAAAG":1293665, "AAATA":1883551, "AAATT":901603, "AAATC":692871, "AAATG":1502293, "AAACA":1810854, "AAACT":760345, "AAACC":503377, "AAACG":358672, 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"GC":[0.424113,0.426496,0.420771,0.427978,0.421457,0.427531,0.432062,0.428263,0.418469,0.42928,0.426986,0.421221,0.425416,0.431799,0.417548,0.422617,0.4226,0.424205,0.421362,0.426241,0.419223,0.427727,0.420257,0.428273,0.422304,0.425501,0.416731,0.434707,0.421887,0.424562,0.423164,0.42925,0.416027,0.431805,0.424205,0.42404,0.41842,0.429593,0.41963,0.425154,0.420796,0.424232,0.41897,0.425732,0.418558,0.427337,0.416137,0.423428,0.42592,0.425712,0.416122,0.425725,0.421148,0.419541,0.422797,0.427768,0.41555,0.421481,0.42065,0.422141,0.420158,0.424324,0.414692,0.4226,0.418313,0.424549,0.419943,0.421958,0.414831,0.430183,0.41872,0.420066,0.418954,0.42662,0.412492,0.427334,0.42115,0.420152,0.416583,0.425926,0.417779,0.424575,0.417026,0.420577,0.417039,0.422447] }, "kmer_count": { "AAAAA":1916493, "AAAAT":1302037, "AAAAC":1168999, "AAAAG":722653, "AAATA":1358523, "AAATT":799243, "AAATC":712879, "AAATG":1167092, "AAACA":1678898, "AAACT":851107, "AAACC":900826, "AAACG":288290, "AAAGA":734522, 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"CCCGC":168371, "CCCGG":135866, "CCGAA":128204, "CCGAT":175777, "CCGAC":207232, "CCGAG":151173, "CCGTA":175301, "CCGTT":241018, "CCGTC":234380, "CCGTG":174934, "CCGCA":172652, "CCGCT":226601, "CCGCC":202925, "CCGCG":51974, "CCGGA":122589, "CCGGT":140021, "CCGGC":133772, "CCGGG":109356, "CGAAA":171465, "CGAAT":128061, "CGAAC":132826, "CGAAG":113947, "CGATA":160781, "CGATT":174893, "CGATC":147349, "CGATG":172132, "CGACA":296234, "CGACT":201193, "CGACC":204781, "CGACG":86950, "CGAGA":191877, "CGAGT":117838, "CGAGC":117020, "CGAGG":133330, "CGTAA":162335, "CGTAT":157333, "CGTAC":160915, "CGTAG":155456, "CGTTA":227999, "CGTTT":352823, "CGTTC":218904, "CGTTG":215303, "CGTCA":260804, "CGTCT":297213, "CGTCC":196464, "CGTCG":72678, "CGTGA":147481, "CGTGT":239723, "CGTGC":148218, "CGTGG":149911, "CGCAA":189347, "CGCAT":151011, "CGCAC":217082, "CGCAG":170133, "CGCTA":200862, "CGCTT":171724, "CGCTC":386080, "CGCTG":265428, "CGCCA":215250, "CGCCT":180243, "CGCCC":208603, "CGCCG":70200, "CGCGA":43887, "CGCGT":48464, "CGCGC":75792, "CGCGG":42735, "CGGAA":180988, "CGGAT":114051, "CGGAC":135935, "CGGAG":158780, "CGGTA":145857, "CGGTT":143725, "CGGTC":145876, "CGGTG":164384, "CGGCA":161652, "CGGCT":157269, "CGGCC":148274, "CGGCG":67831, "CGGGA":114276, "CGGGT":84887, "CGGGC":87439, "CGGGG":93945, "GAAAA":789832, "GAAAT":748588, "GAAAC":618344, "GAAAG":491292, "GAATA":539421, "GAATT":521511, "GAATC":350147, "GAATG":543446, "GAACA":769583, "GAACT":442811, "GAACC":417188, "GAACG":189332, "GAAGA":570120, "GAAGT":451173, "GAAGC":353040, "GAAGG":372308, "GATAA":421654, "GATAT":535790, "GATAC":386259, "GATAG":267044, "GATTA":450070, "GATTT":703279, "GATTC":394614, "GATTG":412685, "GATCA":479253, "GATCT":471780, "GATCC":333733, "GATCG":171324, "GATGA":575974, "GATGT":627596, "GATGC":382509, "GATGG":392654, "GACAA":786913, "GACAT":805962, "GACAC":891254, "GACAG":775881, "GACTA":476504, "GACTT":476542, "GACTC":494993, "GACTG":640864, "GACCA":691283, "GACCT":463101, "GACCC":440659, "GACCG":135706, "GACGA":199314, "GACGT":179199, "GACGC":133594, "GACGG":149051, "GAGAA":622002, "GAGAT":475096, "GAGAC":577765, "GAGAG":856141, "GAGTA":337327, "GAGTT":382735, "GAGTC":312105, "GAGTG":380651, "GAGCA":408245, "GAGCT":410193, "GAGCC":334151, "GAGCG":148878, "GAGGA":525201, "GAGGT":345486, "GAGGC":305147, "GAGGG":292271, "GTAAA":711162, "GTAAT":610852, "GTAAC":502812, "GTAAG":279657, "GTATA":646454, "GTATT":778495, "GTATC":465034, "GTATG":481733, "GTACA":781237, "GTACT":606676, "GTACC":481333, "GTACG":128597, "GTAGA":439537, "GTAGT":421077, "GTAGC":358144, "GTAGG":279830, "GTTAA":571614, "GTTAT":643341, "GTTAC":571142, "GTTAG":371281, "GTTTA":742630, "GTTTT":1192830, "GTTTC":712757, "GTTTG":766491, "GTTCA":678027, "GTTCT":766625, "GTTCC":554336, "GTTCG":116660, "GTTGA":587388, "GTTGT":750587, "GTTGC":471354, "GTTGG":354901, "GTCAA":602279, "GTCAT":773525, "GTCAC":605073, "GTCAG":565698, "GTCTA":615396, "GTCTT":656636, "GTCTC":1125234, "GTCTG":880259, "GTCCA":597792, "GTCCT":672214, "GTCCC":490036, "GTCCG":156250, "GTCGA":121879, "GTCGT":165573, "GTCGC":120538, "GTCGG":102502, "GTGAA":548238, "GTGAT":473421, "GTGAC":439006, "GTGAG":338632, "GTGTA":621603, "GTGTT":923056, "GTGTC":632156, "GTGTG":1399344, "GTGCA":473992, "GTGCT":459442, "GTGCC":341495, "GTGCG":125164, "GTGGA":456286, "GTGGT":430862, "GTGGC":327942, "GTGGG":252500, "GCAAA":534750, "GCAAT":424854, "GCAAC":556540, "GCAAG":343716, "GCATA":391845, "GCATT":596565, "GCATC":434623, "GCATG":421703, "GCACA":699826, "GCACT":473593, "GCACC":432116, "GCACG":138969, "GCAGA":502607, "GCAGT":490145, "GCAGC":614675, "GCAGG":377631, "GCTAA":456339, "GCTAT":471103, "GCTAC":656000, "GCTAG":324585, "GCTTA":270350, "GCTTT":680734, "GCTTC":528643, "GCTTG":316616, "GCTCA":495999, "GCTCT":906968, "GCTCC":968290, "GCTCG":148865, "GCTGA":514001, "GCTGT":792325, "GCTGC":1035015, "GCTGG":483631, "GCCAA":509887, "GCCAT":594836, "GCCAC":549029, "GCCAG":413151, "GCCTA":390165, "GCCTT":514560, "GCCTC":517601, "GCCTG":423161, "GCCCA":478745, "GCCCT":448504, "GCCCC":417896, "GCCCG":110087, "GCCGA":128701, "GCCGT":133386, "GCCGC":131915, "GCCGG":104150, "GCGAA":108223, "GCGAT":103552, "GCGAC":105963, "GCGAG":96559, "GCGTA":90329, "GCGTT":155733, "GCGTC":132072, "GCGTG":130982, "GCGCA":126329, "GCGCT":158972, "GCGCC":110978, "GCGCG":55812, "GCGGA":85512, "GCGGT":106424, "GCGGC":97770, "GCGGG":71342, "GGAAA":596682, "GGAAT":415744, "GGAAC":396711, "GGAAG":388020, "GGATA":305611, "GGATT":388722, "GGATC":286213, "GGATG":377262, "GGACA":670417, "GGACT":381469, "GGACC":314636, "GGACG":134792, "GGAGA":537882, "GGAGT":334580, "GGAGC":306860, "GGAGG":387924, "GGTAA":340625, "GGTAT":352338, "GGTAC":369146, "GGTAG":260391, "GGTTA":342999, "GGTTT":505890, "GGTTC":301156, "GGTTG":321909, "GGTCA":466516, "GGTCT":467505, "GGTCC":285570, "GGTCG":93738, "GGTGA":376257, "GGTGT":498730, "GGTGC":261015, "GGTGG":300140, "GGCAA":344066, "GGCAT":346705, "GGCAC":312111, "GGCAG":380903, "GGCTA":376348, "GGCTT":344210, "GGCTC":336463, "GGCTG":423358, "GGCCA":436642, "GGCCT":390667, "GGCCC":281167, "GGCCG":118148, "GGCGA":104744, "GGCGT":94563, "GGCGC":100265, "GGCGG":97153, "GGGAA":340818, "GGGAT":264417, "GGGAC":259867, "GGGAG":297972, "GGGTA":227604, "GGGTT":259387, "GGGTC":202237, "GGGTG":243309, "GGGCA":246822, "GGGCT":227754, "GGGCC":217911, "GGGCG":69451, "GGGGA":241704, "GGGGT":190921, "GGGGC":155283, "GGGGG":190819 }, "overrepresented_sequences": { } }, "command": "fastp --in1 lib_212395_sample_1703674_S98_L001_R1_001.fastq.gz --in2 lib_212395_sample_1703674_S98_L001_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --trim_front1 15 --trim_front2 15 --thread 50 --html /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212395_sample_1703674_S98_L001.fastp-trim.report.html --json /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212395_sample_1703674_S98_L001.fastp-trim.report.json --out1 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212395_sample_1703674_S98_L001_R1_001.fastp-trim.fq.gz --out2 /mmfs1/gscratch/scrubbed/samwhite/outputs/20260520-Fastp-FastQC-MultiQC-dittman-grc-rnaseq/lib_212395_sample_1703674_S98_L001_R2_001.fastp-trim.fq.gz " }