Sample	command
RNA-ACR-140-S1-TP2	/gscratch/srlab/programs/fastp.0.23.1 --in1 RNA-ACR-140-S1-TP2_R1_001.fastq.gz --in2 RNA-ACR-140-S1-TP2_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_front1 20 --trim_front2 20 --thread 40 --html ../trimmed/RNA-ACR-140-S1-TP2.fastp-trim.20230519.report.html --json ../trimmed/RNA-ACR-140-S1-TP2.fastp-trim.20230519.report.json --out1 ../trimmed/RNA-ACR-140-S1-TP2_R1_001.fastp-trim.20230519.fastq.gz --out2 ../trimmed/RNA-ACR-140-S1-TP2_R2_001.fastp-trim.20230519.fastq.gz 
RNA-ACR-145-S1-TP2	/gscratch/srlab/programs/fastp.0.23.1 --in1 RNA-ACR-145-S1-TP2_R1_001.fastq.gz --in2 RNA-ACR-145-S1-TP2_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_front1 20 --trim_front2 20 --thread 40 --html ../trimmed/RNA-ACR-145-S1-TP2.fastp-trim.20230519.report.html --json ../trimmed/RNA-ACR-145-S1-TP2.fastp-trim.20230519.report.json --out1 ../trimmed/RNA-ACR-145-S1-TP2_R1_001.fastp-trim.20230519.fastq.gz --out2 ../trimmed/RNA-ACR-145-S1-TP2_R2_001.fastp-trim.20230519.fastq.gz 
RNA-ACR-150-S1-TP2	/gscratch/srlab/programs/fastp.0.23.1 --in1 RNA-ACR-150-S1-TP2_R1_001.fastq.gz --in2 RNA-ACR-150-S1-TP2_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_front1 20 --trim_front2 20 --thread 40 --html ../trimmed/RNA-ACR-150-S1-TP2.fastp-trim.20230519.report.html --json ../trimmed/RNA-ACR-150-S1-TP2.fastp-trim.20230519.report.json --out1 ../trimmed/RNA-ACR-150-S1-TP2_R1_001.fastp-trim.20230519.fastq.gz --out2 ../trimmed/RNA-ACR-150-S1-TP2_R2_001.fastp-trim.20230519.fastq.gz 
RNA-ACR-173-S1-TP2	/gscratch/srlab/programs/fastp.0.23.1 --in1 RNA-ACR-173-S1-TP2_R1_001.fastq.gz --in2 RNA-ACR-173-S1-TP2_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_front1 20 --trim_front2 20 --thread 40 --html ../trimmed/RNA-ACR-173-S1-TP2.fastp-trim.20230519.report.html --json ../trimmed/RNA-ACR-173-S1-TP2.fastp-trim.20230519.report.json --out1 ../trimmed/RNA-ACR-173-S1-TP2_R1_001.fastp-trim.20230519.fastq.gz --out2 ../trimmed/RNA-ACR-173-S1-TP2_R2_001.fastp-trim.20230519.fastq.gz 
RNA-ACR-178-S1-TP2	/gscratch/srlab/programs/fastp.0.23.1 --in1 RNA-ACR-178-S1-TP2_R1_001.fastq.gz --in2 RNA-ACR-178-S1-TP2_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_front1 20 --trim_front2 20 --thread 40 --html ../trimmed/RNA-ACR-178-S1-TP2.fastp-trim.20230519.report.html --json ../trimmed/RNA-ACR-178-S1-TP2.fastp-trim.20230519.report.json --out1 ../trimmed/RNA-ACR-178-S1-TP2_R1_001.fastp-trim.20230519.fastq.gz --out2 ../trimmed/RNA-ACR-178-S1-TP2_R2_001.fastp-trim.20230519.fastq.gz