Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index. Users are strongly recommended to update HISAT2 to the latest version. Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index. Users are strongly recommended to update HISAT2 to the latest version. 23120087 reads; of these: 23120087 (100.00%) were paired; of these: 17877535 (77.32%) aligned concordantly 0 times 5026621 (21.74%) aligned concordantly exactly 1 time 215931 (0.93%) aligned concordantly >1 times ---- 17877535 pairs aligned concordantly 0 times; of these: 5911831 (33.07%) aligned discordantly 1 time ---- 11965704 pairs aligned 0 times concordantly or discordantly; of these: 23931408 mates make up the pairs; of these: 11115662 (46.45%) aligned 0 times 11728070 (49.01%) aligned exactly 1 time 1087676 (4.54%) aligned >1 times 75.96% overall alignment rate