Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
21831061 reads; of these:
  21831061 (100.00%) were paired; of these:
    12326232 (56.46%) aligned concordantly 0 times
    9122913 (41.79%) aligned concordantly exactly 1 time
    381916 (1.75%) aligned concordantly >1 times
    ----
    12326232 pairs aligned concordantly 0 times; of these:
      3615861 (29.33%) aligned discordantly 1 time
    ----
    8710371 pairs aligned 0 times concordantly or discordantly; of these:
      17420742 mates make up the pairs; of these:
        11468047 (65.83%) aligned 0 times
        5382021 (30.89%) aligned exactly 1 time
        570674 (3.28%) aligned >1 times
73.73% overall alignment rate