Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
25904515 reads; of these:
  25904515 (100.00%) were paired; of these:
    19772855 (76.33%) aligned concordantly 0 times
    5867158 (22.65%) aligned concordantly exactly 1 time
    264502 (1.02%) aligned concordantly >1 times
    ----
    19772855 pairs aligned concordantly 0 times; of these:
      5900854 (29.84%) aligned discordantly 1 time
    ----
    13872001 pairs aligned 0 times concordantly or discordantly; of these:
      27744002 mates make up the pairs; of these:
        13675071 (49.29%) aligned 0 times
        12772749 (46.04%) aligned exactly 1 time
        1296182 (4.67%) aligned >1 times
73.60% overall alignment rate