Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
22662492 reads; of these:
  22662492 (100.00%) were paired; of these:
    17335546 (76.49%) aligned concordantly 0 times
    5104159 (22.52%) aligned concordantly exactly 1 time
    222787 (0.98%) aligned concordantly >1 times
    ----
    17335546 pairs aligned concordantly 0 times; of these:
      5695183 (32.85%) aligned discordantly 1 time
    ----
    11640363 pairs aligned 0 times concordantly or discordantly; of these:
      23280726 mates make up the pairs; of these:
        10546586 (45.30%) aligned 0 times
        11611502 (49.88%) aligned exactly 1 time
        1122638 (4.82%) aligned >1 times
76.73% overall alignment rate