Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
23741291 reads; of these:
  23741291 (100.00%) were paired; of these:
    17749482 (74.76%) aligned concordantly 0 times
    5755528 (24.24%) aligned concordantly exactly 1 time
    236281 (1.00%) aligned concordantly >1 times
    ----
    17749482 pairs aligned concordantly 0 times; of these:
      5342197 (30.10%) aligned discordantly 1 time
    ----
    12407285 pairs aligned 0 times concordantly or discordantly; of these:
      24814570 mates make up the pairs; of these:
        12093546 (48.74%) aligned 0 times
        11708882 (47.19%) aligned exactly 1 time
        1012142 (4.08%) aligned >1 times
74.53% overall alignment rate