Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
22276164 reads; of these:
  22276164 (100.00%) were paired; of these:
    17224772 (77.32%) aligned concordantly 0 times
    4832080 (21.69%) aligned concordantly exactly 1 time
    219312 (0.98%) aligned concordantly >1 times
    ----
    17224772 pairs aligned concordantly 0 times; of these:
      5473695 (31.78%) aligned discordantly 1 time
    ----
    11751077 pairs aligned 0 times concordantly or discordantly; of these:
      23502154 mates make up the pairs; of these:
        11286667 (48.02%) aligned 0 times
        11153519 (47.46%) aligned exactly 1 time
        1061968 (4.52%) aligned >1 times
74.67% overall alignment rate