Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
22972241 reads; of these:
  22972241 (100.00%) were paired; of these:
    13981387 (60.86%) aligned concordantly 0 times
    8616585 (37.51%) aligned concordantly exactly 1 time
    374269 (1.63%) aligned concordantly >1 times
    ----
    13981387 pairs aligned concordantly 0 times; of these:
      4223510 (30.21%) aligned discordantly 1 time
    ----
    9757877 pairs aligned 0 times concordantly or discordantly; of these:
      19515754 mates make up the pairs; of these:
        13103365 (67.14%) aligned 0 times
        5732571 (29.37%) aligned exactly 1 time
        679818 (3.48%) aligned >1 times
71.48% overall alignment rate