Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
15836446 reads; of these:
  15836446 (100.00%) were paired; of these:
    12145881 (76.70%) aligned concordantly 0 times
    3556450 (22.46%) aligned concordantly exactly 1 time
    134115 (0.85%) aligned concordantly >1 times
    ----
    12145881 pairs aligned concordantly 0 times; of these:
      3861613 (31.79%) aligned discordantly 1 time
    ----
    8284268 pairs aligned 0 times concordantly or discordantly; of these:
      16568536 mates make up the pairs; of these:
        7944269 (47.95%) aligned 0 times
        7961132 (48.05%) aligned exactly 1 time
        663135 (4.00%) aligned >1 times
74.92% overall alignment rate