Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
25025833 reads; of these:
  25025833 (100.00%) were paired; of these:
    13989777 (55.90%) aligned concordantly 0 times
    10611848 (42.40%) aligned concordantly exactly 1 time
    424208 (1.70%) aligned concordantly >1 times
    ----
    13989777 pairs aligned concordantly 0 times; of these:
      4553448 (32.55%) aligned discordantly 1 time
    ----
    9436329 pairs aligned 0 times concordantly or discordantly; of these:
      18872658 mates make up the pairs; of these:
        11788924 (62.47%) aligned 0 times
        6440103 (34.12%) aligned exactly 1 time
        643631 (3.41%) aligned >1 times
76.45% overall alignment rate