Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
22614254 reads; of these:
  22614254 (100.00%) were paired; of these:
    17481907 (77.30%) aligned concordantly 0 times
    4916639 (21.74%) aligned concordantly exactly 1 time
    215708 (0.95%) aligned concordantly >1 times
    ----
    17481907 pairs aligned concordantly 0 times; of these:
      4512847 (25.81%) aligned discordantly 1 time
    ----
    12969060 pairs aligned 0 times concordantly or discordantly; of these:
      25938120 mates make up the pairs; of these:
        14255510 (54.96%) aligned 0 times
        10724752 (41.35%) aligned exactly 1 time
        957858 (3.69%) aligned >1 times
68.48% overall alignment rate