Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index. Users are strongly recommended to update HISAT2 to the latest version. Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index. Users are strongly recommended to update HISAT2 to the latest version. 23732695 reads; of these: 23732695 (100.00%) were paired; of these: 17857095 (75.24%) aligned concordantly 0 times 5638880 (23.76%) aligned concordantly exactly 1 time 236720 (1.00%) aligned concordantly >1 times ---- 17857095 pairs aligned concordantly 0 times; of these: 5945705 (33.30%) aligned discordantly 1 time ---- 11911390 pairs aligned 0 times concordantly or discordantly; of these: 23822780 mates make up the pairs; of these: 10910737 (45.80%) aligned 0 times 11857182 (49.77%) aligned exactly 1 time 1054861 (4.43%) aligned >1 times 77.01% overall alignment rate