Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
23852854 reads; of these:
  23852854 (100.00%) were paired; of these:
    12821132 (53.75%) aligned concordantly 0 times
    10584257 (44.37%) aligned concordantly exactly 1 time
    447465 (1.88%) aligned concordantly >1 times
    ----
    12821132 pairs aligned concordantly 0 times; of these:
      3747005 (29.23%) aligned discordantly 1 time
    ----
    9074127 pairs aligned 0 times concordantly or discordantly; of these:
      18148254 mates make up the pairs; of these:
        11636260 (64.12%) aligned 0 times
        5925036 (32.65%) aligned exactly 1 time
        586958 (3.23%) aligned >1 times
75.61% overall alignment rate