Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
25439860 reads; of these:
  25439860 (100.00%) were paired; of these:
    19476927 (76.56%) aligned concordantly 0 times
    5688965 (22.36%) aligned concordantly exactly 1 time
    273968 (1.08%) aligned concordantly >1 times
    ----
    19476927 pairs aligned concordantly 0 times; of these:
      6229475 (31.98%) aligned discordantly 1 time
    ----
    13247452 pairs aligned 0 times concordantly or discordantly; of these:
      26494904 mates make up the pairs; of these:
        12339011 (46.57%) aligned 0 times
        12911609 (48.73%) aligned exactly 1 time
        1244284 (4.70%) aligned >1 times
75.75% overall alignment rate