Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
23308448 reads; of these:
  23308448 (100.00%) were paired; of these:
    12993526 (55.75%) aligned concordantly 0 times
    9903375 (42.49%) aligned concordantly exactly 1 time
    411547 (1.77%) aligned concordantly >1 times
    ----
    12993526 pairs aligned concordantly 0 times; of these:
      3853779 (29.66%) aligned discordantly 1 time
    ----
    9139747 pairs aligned 0 times concordantly or discordantly; of these:
      18279494 mates make up the pairs; of these:
        11845511 (64.80%) aligned 0 times
        5821585 (31.85%) aligned exactly 1 time
        612398 (3.35%) aligned >1 times
74.59% overall alignment rate