Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
Warning: the current version of HISAT2 (2.1.0) is older than the version (2.2.0) used to build the index.
         Users are strongly recommended to update HISAT2 to the latest version.
22164069 reads; of these:
  22164069 (100.00%) were paired; of these:
    12632022 (56.99%) aligned concordantly 0 times
    9144434 (41.26%) aligned concordantly exactly 1 time
    387613 (1.75%) aligned concordantly >1 times
    ----
    12632022 pairs aligned concordantly 0 times; of these:
      4046495 (32.03%) aligned discordantly 1 time
    ----
    8585527 pairs aligned 0 times concordantly or discordantly; of these:
      17171054 mates make up the pairs; of these:
        10752887 (62.62%) aligned 0 times
        5804238 (33.80%) aligned exactly 1 time
        613929 (3.58%) aligned >1 times
75.74% overall alignment rate