Nextflow workflow report

[mad_lumiere]

Workflow execution completed successfully!
Run times
14-Dec-2022 09:26:49 - 15-Dec-2022 17:12:54 (duration: 1d 7h 46m 5s)
  218 succeeded  
  0 cached  
  0 ignored  
  0 failed  
Nextflow command
/gscratch/srlab/programs/nextflow-21.10.6-all run /gscratch/srlab/programs/epidiverse-pipelines/snp -config ./base-srlab_500GB_node.config --input /gscratch/scrubbed/samwhite/data/C_gigas/BSseq --reference /gscratch/srlab/sam/data/C_gigas/genomes/cgigas_uk_roslin_v1_genomic-mito.fa --variants --clusters
CPU-Hours
889.1
Launch directory
/gscratch/scrubbed/samwhite/outputs/20221214-cgig-nextflow-epidiverse-snp-haws-hawaii
Work directory
/gscratch/scrubbed/samwhite/outputs/20221214-cgig-nextflow-epidiverse-snp-haws-hawaii/work
Project directory
/gscratch/srlab/programs/epidiverse-pipelines/snp
Script name
main.nf
Script ID
18ce7cac9eab4c995f43a882bc0d39a4
Workflow session
3a1ec1b2-f66e-4cd0-8fca-bcfa046962c0
Workflow profile
standard
Nextflow version
version 20.07.1, build 5412 (24-07-2020 15:18 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)