FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-larvae-day5-RNA-EPI-99-6_S48_L006_R1_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-larvae-day5-RNA-EPI-99-6_S48_L006_R1_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155
Sequences flagged as poor quality0
Sequence length41-151
%GC75

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC6340.64516129032258No Hit
ACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC42.5806451612903225No Hit
CCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC21.2903225806451613No Hit
CCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC21.2903225806451613No Hit
CAACACAGCACAGTCAAGCTTACTGGCTATATGTTTGTTAAGTGAACACA10.6451612903225806No Hit
CCGCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCAC10.6451612903225806No Hit
ATCTAATTGAAAAATTTGAATATAGATTTAAACAAACACTGAGCAGTTTA10.6451612903225806No Hit
TTATTACTGGTAGGCTTGCATTATTAAAAGATAAATTTGATATATGGTAC10.6451612903225806No Hit
CCCAAGGATTTAATTTACTATTTGTCAACTTGTACTCATTATCATGGTGG10.6451612903225806No Hit
TGGAGACGTGGGAAGGGAACCATGTTGACAGCCAATTTACGGAGATCGGC10.6451612903225806No Hit
NGAATATCTTACAACATTACATATTTACTAACAATTTTGCCAAAAGGATT10.6451612903225806No Hit
ACCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
TTGAGGACTGCCAAATGACCTGGTGTTGTTGTTTCTTTTGTATTGTTGCT10.6451612903225806No Hit
GTAATTGCTAGCACTGCATATTAGGAGGACATGAATTTAATGTCAACCCT10.6451612903225806No Hit
AAAGTCGGAACGAAAACAAAAGAAAAGACATGGAAGAATAGCAGCAAAAA10.6451612903225806No Hit
AGATAATCTACAAGTTGTTTTAACAGATAAATATCATCAACATGTGATAC10.6451612903225806No Hit
TGGTGGTCAGAATCGTATGCGCGGTTATAATTCTCTTCAGGGTCTAACAA10.6451612903225806No Hit
CCTCTTCTTGCTCTTCTTCGTCAAATTCGCCCTCCTCCTCCGCCGTGGCA10.6451612903225806No Hit
ATGCTCGATTAGTTTGTAGAAAGACTTCTTCAAATCGGAATGTAGCTTCT10.6451612903225806No Hit
CGACCGGAATATATTTTAACTGATTTTGCGAAGAAAATAAAATCTTTTTA10.6451612903225806No Hit
AGAGACGTCATCAATAGTGTGTGTGCCGTTAATAACGGAATTTACAATTC10.6451612903225806No Hit
TGATGGGATTGAACAGTATACAGTATAAATAAATGACACAAAAAGGTGCT10.6451612903225806No Hit
CTTTTATTTTGTGTTCATAACCATCTGGTATTTTTGGTCTGATGCACAGT10.6451612903225806No Hit
AGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCC10.6451612903225806No Hit
TCTCATTTACAAAAACTGTTGTGTACATAATCAGTAGGTTTTCGGGAAGA10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCC10.6451612903225806No Hit
CTATAGTGTAGATGCCTTAACTTGAACCATCACTTAATTATTATTAGTGG10.6451612903225806No Hit
AGATGACATACACAGGTTATGTATGCAGATGTCAAATACATGACCGGGTA10.6451612903225806No Hit
ACGCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
AGAAAGTAGGTCGGCAAAATGGGTGTAACTTTTATTTGATTGTCTTTTTG10.6451612903225806No Hit
GGGCATCGGAGACAGGTGGTGACTCCAGACATGGTAGCGGAGACGAGATG10.6451612903225806No Hit
ATGACACCATAGAAATTGATGTAAAAAACTGGTTTTCTATTTAAGAACCT10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCC10.6451612903225806No Hit
AGTATATACAATATAACCACATGCAACAATAAAACACCAAATCCATACAC10.6451612903225806No Hit
TTTGACTACAATTTTTTTAATTTTGTCAGTAGTGTACATGCCCATTTTTA10.6451612903225806No Hit
CCCGGTTGTTCAAGGAGTTGCAGTAACATAAACTTCGCATCATGAACTTG10.6451612903225806No Hit
CCAGGCTAGACTAAAATAGGTTTCCTAACCAGGTCTTCCGGTACGTGCCC10.6451612903225806No Hit
CCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
TTGATAGTGTGGTAAAAATAGCAATAAATGTCACACACATACACATGTAT10.6451612903225806No Hit
CAGCAAACGCCCGTTTAAACTCACGTCTGTCACTTGACTGGGCCATGGAC10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCC10.6451612903225806No Hit
ATTTTCTGATGTTAAAAAAACTATAATAATAAAAAGAATTAAGAAGCAAT10.6451612903225806No Hit
GTGAAGTTCTGCTTGTACATCACAGATCCAAATGGGGGCTCAATGGGCCC10.6451612903225806No Hit
CAAATCGAACAAAACTATAGTTGGTCATCATTACTACATAAACATTTTGA10.6451612903225806No Hit
CTCTTCGGCAAGTTGGTTAGCATCCAACCAGCTAATAACTTCTGTGCACT10.6451612903225806No Hit
CCATTTTCAACACATTTCAAGTTACATGTATCTATGGCATACCAATTCTA10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCC10.6451612903225806No Hit
GTTATGGTAATGTTATGTTATGTTATGTTATGACAATGTTATGTTATGGT10.6451612903225806No Hit
TCACTGGTCACATGACTAGATCATAATATGGATATCTTGTAAAAGGCATG10.6451612903225806No Hit
AAAGCGATTACTTTTTTTAAGTCATACTCAAACCTGGCCCTCAACCCAGC10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCT10.6451612903225806No Hit
CCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCACCCCACGCCCCCCCCCCCCCCCCTC10.6451612903225806No Hit
CACCATGCCAAAACACACTCCCTCCAATATCAAGAAAACGAGTTTCGACT10.6451612903225806No Hit
GAAAAGTAAATCAATTTATTGACAAACATATGTAGATTACTTCAGAGCGC10.6451612903225806No Hit
GGGCCACTGGATCTTGCCCTGGTGGGTAAGGCCATGCTTAGTAAATCTTT10.6451612903225806No Hit
CACGTCCATCTGCAAGTAACGGGCATATCCGTGTGGCCTTG10.6451612903225806No Hit
AAACTATTCACAATTGTCTTAATGCATCGACCTTCGTTGCATGGTTAACG10.6451612903225806No Hit
NTTTGCTCGAATTATAAACACGCTATGATTTTCATAGCTATTATATAATA10.6451612903225806No Hit
GCCCGCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCACCCCGCCC10.6451612903225806No Hit
GATCAAAGTACCATACCCAGGATGTAAAACATCATTCATTAAACATACAT10.6451612903225806No Hit
ACCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
GTTCTTTCAAACCTGGTCTCTAGGCTTGATTTTTATGTTAATGCTACCAT10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCACC10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCC10.6451612903225806No Hit
CCCCCCCCCCCCCCCACCCACCCCCCCTCCCCCCCCCCCCCCCCCCCCCC10.6451612903225806No Hit
CCAGCAGGCGACAAACCACCGTTTCCGGTTCCGGACTGCGCAGAAAGGTG10.6451612903225806No Hit
TTTAAGTCCAGCAGTTGTCATTTGTTCAAATACATAATTAACTGAGTCTT10.6451612903225806No Hit
GGGGCAGCTTCCAACTTCTTGCCTGAACGACGATCAATCTTCTCCTTAAT10.6451612903225806No Hit
CCTTCAGGATTTGGAACTATATAATTGTTTAAATAAACCTACAACATTAC10.6451612903225806No Hit
CGACCCCTGAAGATGGCGGCAACAGTAAGGTATCTGCCGTGACGAGGATC10.6451612903225806No Hit
CGGCACTGTCAATACCTTTTTATTTTCTTATATGATAACAGCTTTAAATC10.6451612903225806No Hit
TTTAATGGCATATTGAAGAGCCAGTTTTTCACGTCTTAAATACAATGATG10.6451612903225806No Hit
CTGTGTTCCTTTAAAGCGTTCTTCCACAGGTACAGAATTGATAAAAACAA10.6451612903225806No Hit
CCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCC10.6451612903225806No Hit
TGTAAACATCCTGCAGAGGAAGACGAAGGGCCTTGTCTGTTGGTCTCTGT10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCA10.6451612903225806No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCACCCCCCCC10.6451612903225806No Hit
CTATTAAGTAATGTATTTCAAGTAAATAATACTGATGTTGCGATATTAAA10.6451612903225806No Hit
CTTGGGGTTGAGCGGGGCTTCGGTAAGTAGAACGGGGTGTTCCTCTGGGG10.6451612903225806No Hit
TCATGTCAAGATAAGATATTTTATTTCCTCCAATGATATAAGAGAGCATA10.6451612903225806No Hit
AGCAGATGAAAAACCCTGCAGAAATAGAAGTAGTCACCATCGCTGCCAAA10.6451612903225806No Hit
ACCTTTGGCAGCAAACTAACTCTGCCAGAATGACGACAAGTGACACGGAG10.6451612903225806No Hit
ACAGCACCCCCCCCCCCCCCCCACCCCCCCCCCCCCACCCCCCCCCCCCC10.6451612903225806No Hit
ATTACTATAACCAGTGTTCAGCTTGGGGGATGCGACCTGCGGAACGTCTT10.6451612903225806No Hit
TGATGGGGGTGATGATGATGATGGTGATGGTGGTGATGATGGTGGTGCCA10.6451612903225806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)