FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-larvae-day5-RNA-EPI-99-3_S24_L003_R2_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-larvae-day5-RNA-EPI-99-3_S24_L003_R2_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1213
Sequences flagged as poor quality0
Sequence length59-151
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC27222.423742786479803No Hit
GCTCAAAATGCCTAAGCAGATCCAAGAAATCAAGGATTTCCTTTTGACAG60.49464138499587795No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCC50.4122011541632316No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCC40.3297609233305853No Hit
AGCAGATAGCATAAATGTCTTTTATTGTTATTTTGTATTTCTTTTAAAAC40.3297609233305853No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACC40.3297609233305853No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCC30.24732069249793898No Hit
CGACATCAGAATGGCGTGGTCAGGTATGGCCGGCAGGATTCCACAATGCT30.24732069249793898No Hit
NCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC30.24732069249793898No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCC30.24732069249793898No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCC30.24732069249793898No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCC30.24732069249793898No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCC30.24732069249793898No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCC30.24732069249793898No Hit
ATGTATGTATCTGTGTGTATGTATATAACCATGGGTAGGTATGTATGTAT20.16488046166529266No Hit
CCCAGAACACTTGGATCAAGATGCGAGCCAAGTGGAGAAAGAAGCGTATG20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCC20.16488046166529266No Hit
CGGAGATGCAATAGTCATACAGTTTTTCATTGGAAATAAACGACTTTCTT20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
TCACAAGGACCTGTTGCAATATAAGCCATACTAAATAAAATGACTGTGAA20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
CGCTACCATGTCTGGAGTCACCACCTGTCTCCGATTCCCTGGTCAGTTGA20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
CGATTTTCTAGAAGGATTAGTCAGGGCTGGTGTTTTTTTTTACTCTCGGT20.16488046166529266No Hit
GGTCACTACACCATTGGTAAGGAAATCGTCGACTTGGTTCTCGACAGAAT20.16488046166529266No Hit
CGATAGTCGGTTTGTTTTGCCTAGAGGGGAGAATATTCGTGTTTTAGTGG20.16488046166529266No Hit
CAAGAATGCACAACTTTGATGGCATGTTCCATCCGTGATAAAATATTGTG20.16488046166529266No Hit
GTGCAGAGCATGAAAAAATGGATGATGAAAATTATCAATACAAGAGATAA20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAC20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
CGCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC20.16488046166529266No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCC20.16488046166529266No Hit
TGTCAGATGACGGGTTATCTGTTCTGTAGGATACAAAAAGCTTTATTTTG20.16488046166529266No Hit
CTTGGATCAAGATGCGAGCCAAGTGGAGAAAGAAGCGTATGCGCAGGTTG20.16488046166529266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)