FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-juvenile-ambient-exposure-RNA-EPI-123-8_S62_L008_R2_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-juvenile-ambient-exposure-RNA-EPI-123-8_S62_L008_R2_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences435
Sequences flagged as poor quality0
Sequence length57-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTGATTGAACACATTATGGTAAATGCAGCCCCAAAGATGAGACGAAGA306.896551724137931No Hit
CTATTTCATTAATATTAAGAATAAATAAATGTTGTGTCAGTTTTGTTTTT265.977011494252873No Hit
CAAAATCGGAAAACACTCTAACAGTTATGGTGCTGGTACACGCAAATTAA255.747126436781609No Hit
TGTGTGTCATTAACTTTACAATATTTGTTAATATTGTAATATCTAGGAAT235.287356321839081No Hit
CAAATCTTACACAAGCAAATACAAATCTATTTATGAGCCAGATGAGAAGT214.827586206896552No Hit
AATAACAGTTCAGCACCCAAAATAACTATCAATCGCTTTCATTTTGATAC204.597701149425287No Hit
TCTGGGCAGGTTTTATCAGTCCAAAGTTCCAAGATGCCGCAGGATGGTTC194.3678160919540225No Hit
GATGACATGGGATTTGGTCTCTTTGATTAAACACCACACTTACGGACAAT173.9080459770114944No Hit
GTTGCCCCTTTGTTATATACCGGTATTACCACGAAAATACAACATATGGT143.218390804597701No Hit
GTTTACAGTCCAAAGTTCCAAGATGCCGCAGGATGGTTCTGGGCAGGTTT132.9885057471264367No Hit
GGACGTATGAGGTCCATGAAGGATGTTTACAGACGATTCAGGAATGGTTT132.9885057471264367No Hit
AGAAGCAGAAGAACAGTTTCTACATGATCAAGAATAAATTATTATCTTCT132.9885057471264367No Hit
CAGCGGAGACTATCATATGTAGGGGGAGTAAGAACGACATCAGAATGGCG132.9885057471264367No Hit
CACATGACCACTATAGTATATCTGAAGTGGATGTTTTATTTTCAGGGCAT132.9885057471264367No Hit
GTTGGGACCGCCAGATACATATGTCATCCAAAAGGAAGACGCATTGCTTA122.7586206896551726No Hit
CCGGCAACCCAGTTGACTTGGAGCACAGGCAGAGTGTGTTTGGTGCCAAC112.528735632183908No Hit
TGAAGGGAGCTGGTGCCAATATTCTCAGAGGTGTGGCTGGTGCTGGTGTG112.528735632183908No Hit
TAGAGGGAGATGATGATGACGCATCACGCATGGAGGAAGTAGACTAAATC102.2988505747126435No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG102.2988505747126435Illumina Single End PCR Primer 1 (100% over 50bp)
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC102.2988505747126435No Hit
TTTGGCGGTGGTCAAGTCGGCAAAGGTTGATAGTTCCTGTTGCATATGGT51.1494252873563218No Hit
TTTGGCGGTGGTCAAGTCGGCAAAGGTTGATAGTTTCTGTTGCATATGGT40.9195402298850575No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT30.6896551724137931Illumina Single End PCR Primer 1 (100% over 50bp)
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACC20.45977011494252873No Hit
TTTGGCGGTGGTCAAGTCGGCAAAGGTTGATAGTTCCTGTTGCATATGAT20.45977011494252873No Hit
NTTGGCGGTGGTCAAGTCGGCAAAGGTTGATAGTTTCTGTTGCATATGGT10.22988505747126436No Hit
AACACCACACTGACGAGTTCGATATAACCGATGTCAAAAAGGAAAAGCCG10.22988505747126436No Hit
ATTCCCGTAAACGATCACATGGAGGAAACAATGGATCATTGTTTCTTCAG10.22988505747126436No Hit
CCCCCCCCCCCCCCCCCCCCACACCCCCCCCCCCCCCCCCACCCCCCCCC10.22988505747126436No Hit
GGATTATTAATTAAAACAAGGACTGATATAGAGGACAAGCAACTGATTTA10.22988505747126436No Hit
CCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCC10.22988505747126436No Hit
TGTGTCTCATTAACTTTACAATATTTGTTAATATTGTAATATCTAGGAAT10.22988505747126436No Hit
TTGAAATATCTCTAATCAACATCATGGAAAAATAAAATTTACTTCAAAGC10.22988505747126436No Hit
TGTCCAGACATAACAATAACAATTAAGTTTTCTTAAATGTGTCCCTGAGT10.22988505747126436No Hit
ATTTGTGTCGGTTCATGTTCAGCAACCTACAGCGGAGCCATCTCACTGAC10.22988505747126436No Hit
AGAATATTGCCAATCATCAAAGTGGTTGGGAAGACTGAAAAGCAACGAAA10.22988505747126436No Hit
AAGGCCCTTCACTTGACCAAATTCAAGATCAACATCGCGAGGTCCTGCAA10.22988505747126436No Hit
GCTGATGTCCTCAGCCGCCATGGATGATAACTATGACATCACCAACAGGT10.22988505747126436No Hit
AAAGACAATTTCGATCCATCATTAAAATTGTGTTTTCAATACGCTTACAA10.22988505747126436No Hit
TTTTTTTTCTCAAATTGTTTTTTAATCAATTGAAATCATGTGGAAGAAGT10.22988505747126436No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCC10.22988505747126436No Hit
TGTCATGCTCTGGATAGAGAAATGTAAAATTCAACTGGCGCTTTCATTGT10.22988505747126436No Hit
TTTTTTTTGTTAATGGACATGAAAATGAAGCTTAAAGACAGATTAAGAAT10.22988505747126436No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCGCCCCCCCCCCCCAAC10.22988505747126436No Hit
TTTTTTTTGTGAATGGACATGAAACTGAAGTTTAAAGACCGATTAAGAAT10.22988505747126436No Hit
AGAAGCAGAAGAACAGTTTCTACATGATCAAGAACAAATTATTATCTTCT10.22988505747126436No Hit
GGACGTATGAGGTCCATGAAGGCTGTTTACAGACGATTCAGGAATGGTTT10.22988505747126436No Hit
TTTGAAGTGTAAATTGTTTTTGTGCAAGTATTCACTATAAATTTCATTTC10.22988505747126436No Hit
ATCGTACTCGACTCCGGAGATGGTGTAACCCACACCGTACCAATCTACGA10.22988505747126436No Hit
GTTGTGTAGAATACCTCGTGTTTTATGTAGATTCATTATGTCATATCATA10.22988505747126436No Hit
CGGATATTTCTTCTTAATCACTTGTTGTGTTTAGTTCATCACTTTACCGC10.22988505747126436No Hit
TTTTTTTTTCTGCTTGAAACAGTTTAATAACAACATATTGCACATTTTAC10.22988505747126436No Hit
CCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAC10.22988505747126436No Hit
GGGGAGAATATTCGTGTTTTAGTGGGGTCGGAGGATGTGATGCATTGTTG10.22988505747126436No Hit
GCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCGC10.22988505747126436No Hit
TGGAACCATTACAGAATTGCATGATAAAACCCAAATCAGAGAAAACAGTA10.22988505747126436No Hit
TCTACAAACACATCTGATTTACAAAACTAGTGTTAATAAAACTATTCGAA10.22988505747126436No Hit
GGTGAGTGAGCTAGAATACCTTTTACTTGGAATGTTGTTATTAAGGGTGT10.22988505747126436No Hit
TCAAAAGATTTACACAACTTGCCGTTGCTTCGCGAAGGCTTATGTCTTCC10.22988505747126436No Hit
NTTTACAGTCCAAAGTTCCAAGATGCCGCAGGATGGTTCTGGGCAGGTTT10.22988505747126436No Hit
CTGGAGTACTGGTTAATCCCAGGAAACAGTGGTTAAGTTAACTGATGGTC10.22988505747126436No Hit
AGGTCTTCCTCTACCAGTAAAACTGGATATGCCAAACATAACCTGAAAGG10.22988505747126436No Hit
AAAAATTCATGGATGGACAACGGACAACAGGTGATCAGAATAGTTCACCG10.22988505747126436No Hit
GGTGCTATGCGAGTATGTTGTTGACTGGTGTGATAAAATAAATTTTAACA10.22988505747126436No Hit
GCAACGCTAGTTTCATGCAAACGCCGGTTTGGTAAGACGTTAACGTTAGC10.22988505747126436No Hit
TTTTACCGATATCAGTCAGAATTAAATTTTTGGGACCAAATGCAAGATAT10.22988505747126436No Hit
GTGGCCATATGCAACCTATACGCAGGGGTTTACATGCAATGTCGGTGAAG10.22988505747126436No Hit
GTTTCACTAAACATATCAAGCTGAGACTTTTCCTCTGCTCAAAATTTCAC10.22988505747126436No Hit
TTTTTTTTTTTAATGCACATGAAAATGAAGTTTCAAGACAGATTAAGAAT10.22988505747126436No Hit
TGTAAATTAACATGATATACCAAACCATTCTTGATGATTTTACATTCACA10.22988505747126436No Hit
TGGTGATTGAACACATTATGGTAAATGCAGCCCCAAGGATGAGACGAAGA10.22988505747126436No Hit
GTGCAGGGTTTAAGCCCAGTTTATGTGAGAAAGTTGGACTGTACTTTGCG10.22988505747126436No Hit
TTCACTTCATTTCATGACTTCGGTGTAAAAGATATCGTTTTGGGACAATA10.22988505747126436No Hit
TTTTTTTTCATTGGATCTGAATTGTTTTTTTTACACATACCGGGAAGCAT10.22988505747126436No Hit
GAAATGAAATGAAATGAAATGAAATGAAAATGAAAATGGTAATGAAATGA10.22988505747126436No Hit
TTCACCATGTGCGGTAGCTGCAGTAGGTCTTAAAATTTGATCTGTATAAA10.22988505747126436No Hit
CAGATGACGAATTTAATGGAAGAAGCAAACAAAAAAGACCGTAGTGGCGT10.22988505747126436No Hit
ATACTACTCTTAAAGATAATATTAAATATTGGATAAGTTGTCTTTTCAAT10.22988505747126436No Hit
TTTAATCTGTATGAAAAGAAATACCTAAAACTTTAACCTTTAAAACTCTG10.22988505747126436No Hit
CACCACGGCGCTTGTTCAATACCGAGAAACAACCTCCCTGTGCAGCTGTTGGTACCC10.22988505747126436No Hit
TGGGATCCTGGAAGGTTAACCAGTACTCAAGTACATCCATCTCTACAATT10.22988505747126436No Hit
AATGTTGCTGGGTCGCAAACCAGAAGGATACCGGTATTACAGGAAAAGTG10.22988505747126436No Hit
ATTTATTTAATTTTGCAAAAACTCTGGAATCGAAATTTTTTTAATGTGTC10.22988505747126436No Hit
CTTTTATGTAAAGAGGTGCTTTTTTTTTAGTATAATCATTAAGCACAGAA10.22988505747126436No Hit
TGCATTGTGCCAATGAGTAAATATTTGTTCTGATTTCAATTCCTTGTGGT10.22988505747126436No Hit
TGTAAACATGCCTCTCGCTAGAGATTTATTGCACCCAAGTGCCGAAGAAG10.22988505747126436No Hit
TGAAGGGAGCTGGTGCCAATATTCTCAGAGGCGTGGCTGGTGCTGGTGTG10.22988505747126436No Hit
TCTGGGCAGGTTTTATCAGTCCAAAGTTCCAAGATGCCACAGGATGGTTC10.22988505747126436No Hit
CAACAGACAAGGCCCTTCGTCTTCCTCTGCAGGATGTTTACAAAATTGGA10.22988505747126436No Hit
TGGGTGTCATTAACTTTACAATATTTGTTAATATTGTAATATCTAGGAAT10.22988505747126436No Hit
TTTTTTTTTTTAATGGACATGAAAATGAAGTCTACAGACAGCTTAAGAAT10.22988505747126436No Hit
TTTTTTTTCTTTTCCACAATAATGTATTACGGGTGGTACAAACAAACGAG10.22988505747126436No Hit
ATCTAACAAGAATCTCTACGAGTGGTATGAAAAAAAATGAGAAATTCTTG10.22988505747126436No Hit
GGACGTATGAGGTCCATGAAGGATGTTTACAGACAATTCAGGAATGGTTT10.22988505747126436No Hit
TTTTTTTTTTTTTTTTTCAACAACACGCTGCATTTTTGAACTTAGATCTT10.22988505747126436No Hit
TGAAGGGAGCTGGTGCCAATATTCTCAGAGGTGTAGCTGGTGCTGGTGTG10.22988505747126436No Hit
TGTACATTTTAACATGTGATGTTGAATGAACCTTACAAAATATTATTATG10.22988505747126436No Hit
NCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.22988505747126436No Hit
CGTTCATACACGCTCGGTAATAAGCTAAACTATAATCAGTATATAACTAT10.22988505747126436No Hit
AAGAAATTTGCCCCCTTATTATATCGGTAGTATATATCATGATTAGTCTG10.22988505747126436No Hit
TGCTCATCTGCTTTGATCGAGGTTGCAGTCAGTTATTAAAGATGAAACAG10.22988505747126436No Hit
GCAGGCACAGATATCACTGTCAACAGTATACACCCCCTACCCAGGAACGC10.22988505747126436No Hit
CCAGACTTAGCCGTGTTACAATGGTGGCAAAGGCTGGATCAAGACATGAG10.22988505747126436No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCC10.22988505747126436No Hit
GCTAGTGTTAGTGTATGGATCCCTAGGGTTATTGTGTATGGTTAGTGTTA10.22988505747126436No Hit
GAGCTCACCTGTGGCGACTTGGTCAAGAACTGTTAATCACTGTGGTTAAA10.22988505747126436No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCC10.22988505747126436No Hit
CCCCCCCCCCCCCCCACCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC10.22988505747126436No Hit
AAGCCAGGAACCAGGCCCTACTGAAGTCTTACCCTGATGATTTCGCAGAG10.22988505747126436No Hit
CTTGGTTTCAATTTTCTAAACGACCATTTGTTTTGTTCGTGAGAAAGATA10.22988505747126436No Hit
TGAATATGCTCAGAATATGCTCAAATTGTTGTGTAGTGAACATAATTTAA10.22988505747126436No Hit
CCGCCCCCCCCCCCCCCCCCCCCCCCACACACCCCCCCCCCCCCCCACCC10.22988505747126436No Hit
GTTGACCTGTGAAATAATGCAATAGAAAATCTCCATAACAAATATATCTG10.22988505747126436No Hit
ATGCATCCCACTGTCATCATCAGTGCTTTCAGACTGGCTCTTGAAGATCT10.22988505747126436No Hit
TGTTGATTGTTGCTGCCGGTGTTGGTGAGTTTGAAGCTGGTATCTCGAAG10.22988505747126436No Hit
TGTTAATCCAAACTGACGTAAATCAGAAGCGTATCAAAGTTTTGATTTTT10.22988505747126436No Hit
AAAACTCCAAGTTGAAAATAAACCGCTTACTCGAATTTAATTGATGGTGC10.22988505747126436No Hit
TGGCAATACAACATACAGATTTTGACTAGCTGCAGTTTTAAAGTTATTTC10.22988505747126436No Hit
TTTGGTTGATCTGGAGATGAAGAACAACAGCTCTGAAACTCGCACAGTCA10.22988505747126436No Hit
TTTGGCGGTGGTCAAGTCGGCAAAGGTCGATAGTTTCTGTTGCATATGGT10.22988505747126436No Hit

[OK]Adapter Content

Adapter graph