FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-juvenile-OA-exposure-RNA-EPI-115-3_S20_L003_R1_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-juvenile-OA-exposure-RNA-EPI-115-3_S20_L003_R1_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2146
Sequences flagged as poor quality0
Sequence length31-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC22810.624417520969246No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1054.8928238583410995No Hit
ACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC492.2833178005591797No Hit
CCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC160.7455731593662628No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT80.3727865796831314No Hit
TCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC80.3727865796831314No Hit
GGTACAAGTAGAACTATGGTTGGGTACAAGTAAAACTATGGTTGGGGACA80.3727865796831314No Hit
NCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC70.32618825722274No Hit
ACCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC70.32618825722274No Hit
GCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC40.1863932898415657No Hit
TTACAATCCAAGCACTGTTTAAGAGTTATCGTGGAAATTTATCTATGAAC40.1863932898415657No Hit
ACCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC40.1863932898415657No Hit
TTCCATTTACCTTTCGTTCATTTGATTGATTGAATATTTAGCGTCATTTT40.1863932898415657No Hit
TTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.13979496738117428No Hit
TTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.13979496738117428No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC30.13979496738117428No Hit
TCACAATCCACTTTTCACATATATTTTCACTAGAATTATTGTTCTTCATA30.13979496738117428No Hit
CACCAATAAAAATGACACAATACCCAAACCATCCCATCCCACCATTAGAC30.13979496738117428No Hit
TGGCCATCTACCCTGGGTGACTCCCCAAGCCTTGGCCTGTGCCTTCCTTC30.13979496738117428No Hit
GCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC30.13979496738117428No Hit
CAAATGATGCAGAGAATAAAAATCTCAATAAAACACAGATTTACACTAAA30.13979496738117428No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCC30.13979496738117428No Hit
TTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.13979496738117428No Hit
CCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC30.13979496738117428No Hit
GCAGTTTTCAGAGTTTATTCCATTGACTTTCATGTACTTGAATGCATTAT30.13979496738117428No Hit
TTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.13979496738117428No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.13979496738117428No Hit
CCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC30.13979496738117428No Hit
GCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC30.13979496738117428No Hit
GCTTTGTGTCAATATTTACGTCTAATATTGCTTACAGTCTCTTATAAATG30.13979496738117428No Hit
GACACTGTGTTTTCGGTAAACTGATAACACTTTATTTGTATTATCTTGCG30.13979496738117428No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13979496738117428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)