FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-heart-RNA-6_S42_L006_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-heart-RNA-6_S42_L006_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2084
Sequences flagged as poor quality0
Sequence length35-151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG170.8157389635316697Illumina Single End PCR Primer 1 (100% over 50bp)
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT130.6238003838771593Illumina Single End PCR Primer 1 (100% over 50bp)
TGTACACAGACCACTGATGTACATAAACCTATACTGTACACAAACCACTA110.527831094049904No Hit
ATCAGACAGGGTCAAACAATCCTTTGGGAGTCATAAGTCATGCAGATAAA110.527831094049904No Hit
CCAAGATGGAGGAAGACCTTTCGGCACTCCAGAAGAAACACACGAATCTC100.47984644913627633No Hit
TCATGTGAGTTGGTGAAAGTGATATTAGTGTTATCACACATTTAAACGTT90.43186180422264875No Hit
CTTACAAGTTCATGATGCGAAGTTTATGTTACTGCAACTCCTTGAACAAC90.43186180422264875No Hit
GGAAATGTCGTCATCAGAGCACGAAAAGAAACCTAGGAAGAAGTTTTCGA90.43186180422264875No Hit
CTTTAATCTTACACAATAATGGTGAAATAAATTCCTAAGAACAATATAAA80.3838771593090211No Hit
CACTGACCTTCTGCCGCAAGGACAAACCCTGCCTGCATCTTACTGGATGA80.3838771593090211No Hit
CTTATTTCATCCCATTTTGCTTTTGCGTTTAGCTTTTCTGTTGTGGTTTG80.3838771593090211No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC70.33589251439539347No Hit
TGTGAACCCAAAGGCAGAAGAGTACAATGTGATGATGCATGTGATGAAGT70.33589251439539347No Hit
GCTCTTGTAAAGTTGTTTGTAAAATGTCTGCTAATCTAACATCATCATTT70.33589251439539347No Hit
TTTTTCTCAGTCATGGGACGATCCAACATTCACGCAGAAACAATACGATT70.33589251439539347No Hit
ATTACTTTGTACGGAACGGAATACAGTGGAATACCATTCACTCATACTCG60.28790786948176583No Hit
GGAATGTACAACTAAGGCCAAGAATGTACTGGGCTTTAGGGTTTCTATTT60.28790786948176583No Hit
CGTCCGAAGCAGAGAGTTTGTACTATATACGCATTCATTCCTTAATATTA60.28790786948176583No Hit
GTCTTAGGTGTACTAGTATTTATGATTTCTTTTACCATTATTTGAGTGCG60.28790786948176583No Hit
TCCAGCAAAAGTTGCCAAGAAGCAGCCAGCTGCCAAATCTGCATCTGTTA60.28790786948176583No Hit
AAAATGCCTCCTAAATTTGATCCAACTGCAATTACTACTGTATTTGTGAA60.28790786948176583No Hit
GCCTTGGCAACCGAGCTGGAAGATGTCAGGACTCTTCTCGAAAGTGCCGA60.28790786948176583No Hit
AAAATTTAATTCAGTTAGTATTTGAACTCCCTTCGTTTGGATTGTGTCAA60.28790786948176583No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.28790786948176583No Hit
CTGGAATACCCTTGGTGTCTGTAAATATACAATTCAGGATGAGGGACATG60.28790786948176583No Hit
AGTTGATCTCCAATTCCTCTGATGCTTTGGATAAGATCCGATATGAAAGT60.28790786948176583No Hit
TGGTGTCTCTAGAGTTAAAGATTTGTTCAAATGGTGTCCCTAGAGTTAAA60.28790786948176583No Hit
CCTGTCTTTAATAGGGGTTCCGTTTATAGCAGGGTTTTATTCTAAGGACT60.28790786948176583No Hit
TGAACCAGAACCGGAAACTGTACCTGAACCAGAACCGGAAGACGATGTTG50.23992322456813817No Hit
CTTGTCGGCAAAGCTAACGATGTCACGGTAAATTGTGAGATTGTGATTTA50.23992322456813817No Hit
GTCGCAGAATTCAACGCAGAGGTCCACTTATTATTTATAATCAAGATAAT50.23992322456813817No Hit
GTCATTTAAAGGGGACTTAATACACATAATGGTCAGCAGGGTCCCAAAAA50.23992322456813817No Hit
GCTACTCCTGTTAAAGCATCAGGAAAAAGAGGTAGGCCAAAAAAATGTTT50.23992322456813817No Hit
TTTGTACCTGTACCCCAGCTCAGAATGTACCAGAAGATTCAGACTCGTCT50.23992322456813817No Hit
GTTGATCCATCATTGGAGTTTGAAAAGAGAAGAAATGTCCCAGTGAAGTA50.23992322456813817No Hit
CGATCAAAAAGCGCCTAGAAACGTTTCACAACCAAACACAACCTGTCGTA50.23992322456813817No Hit
GCAAAGTGGTCCTGGTCCTTGGGGGCAGATTTGCTGGCAGAAAGGCTGTC50.23992322456813817No Hit
CAAATTTAAGGTAAACTTTGAAAATCTTCTTACTATAGGAATCACTGTAG50.23992322456813817No Hit
AACTAGTCATATCAGATTATAATAAGCACCAACATGAGTTTTATTGCATA50.23992322456813817No Hit
GCCAAAGACTGCAGAAAATTTCCGTGCACTGTGTACTGGAGAGAAAGGGT50.23992322456813817No Hit
CAAAACAAAGATGGAACAGAAGAAGGGAAAGCCACAGATGCAGCAAATAG50.23992322456813817No Hit
GGAAAATCATCCCGCGGTCTTGGAAAGGGTCACAAGTTCAACCAAACAAC50.23992322456813817No Hit
CCTAAGCATGCACTCAAAACACAGGTATATATTTGTTTAAGTATCACAGA50.23992322456813817No Hit
GTCAAAATGTATAATTTTACATAATGACGTCATGTGCATGATAAACTTAC50.23992322456813817No Hit
TTGGTTAATGTCGCCGACTCCTGCAACTCGGAATGTCTCAAGGACAAATT50.23992322456813817No Hit
ATTTATTTTGCTGTTAACAAATAGAACTGGCATTTGATGCAACACGAGGC50.23992322456813817No Hit
GTTAGCCCTCGGTGGCATAAAAATGATGTTAAATATTCAATCAATAATAT50.23992322456813817No Hit
TAAAAAGGGACAACAGGAGTGTGATGCACTGATAGAGATGGTTGAGTTGA50.23992322456813817No Hit
AGTACACTCACACCTGCCTTAAGCAGCCAATCAAGGAATTGAGCAAACAT40.19193857965451055No Hit
AGAATTTCTTATTTTGGGTTCTATGTCGTTAATCCTTTAATAATAGAAGT40.19193857965451055No Hit
GCACCATACTCTGAACATTGGTACTTGACATTGGTGTTCCTATAGCAACT40.19193857965451055No Hit
AAAATTCTTGCCCATCTTGTTTTTCTGGAATATAAGTGTACATGTATTAT40.19193857965451055No Hit
GTTCAATGCAGAAAGTAACCGCATGGTTAACTACCAGTCCGGATGGAATA40.19193857965451055No Hit
GTTTCTGATGTTGTCATGTCCTCAGATGGCCAGTTTGCCCTCTCAGGATC40.19193857965451055No Hit
TAGAAGAGCTATTTTGTCTATTTTAAAGTTAAGATACAATTGTCAAGTTC40.19193857965451055No Hit
ACGACATCAGAATGGCGTGGTCAGGTATGGCCGGCAGGATTCCACAATGC40.19193857965451055No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.19193857965451055No Hit
CGTCAACGATAACTTAGATAATGCTGCGTTAAATTTTGTCACCATGATTT40.19193857965451055No Hit
CTGCAATGTCGAACAGAACAATGTTGTAGAAAAGAAAAGTGAACTTGCAG40.19193857965451055No Hit
GAATGTATCTGGATTTTTCCGAATTTAAAAATTGCTTAAAAACATTTTTG40.19193857965451055No Hit
TGACTATAAAGAATTTAGTTCTTTATCATAATTTGGCTTTATTAGTATTG40.19193857965451055No Hit
GTTGTAGATAAATTGTTCACAAGATGTTTCATTTAAATTTCATCAGATAT40.19193857965451055No Hit
CAGACACATTTGTCAAATATCACAGCTATGGCGTCGTCACCAACATGTCT40.19193857965451055No Hit
CGGGACGATGCCCTCTTATCATACAACGCCATTAATAAATATGTGAAAAA40.19193857965451055No Hit
CGAAAACACTGACTACTACTTCCGTGTAATGGCAGAAAACAAAATGGGAC40.19193857965451055No Hit
CAAAATGGAAAAGTCAATGGTTATCGCAGAGAATTATTTAGTGAAAAAAC40.19193857965451055No Hit
TGAAAACCGGATAAATATATCAAGCCTTGAATATTTAATGGTTAACAGAC40.19193857965451055No Hit
GAGCCCGTATACTAGCAGATAAGTATGACATGGATGTTGGGGAGGCAAGA40.19193857965451055No Hit
CACCTCTCCACATTCAACCAGAGTGGTATTTCTTATTTGCTTACACGATC40.19193857965451055No Hit
GAAAAGTAAACTATTTCTGGAATCACAATAGACTGGAGAAAAACGTGCAC40.19193857965451055No Hit
AGCATATGCAGTAAAAGTATCTTGCTCAAGGACACGAAACATAGCCGCAG40.19193857965451055No Hit
CGATGAGACAGTAGTCAAACTTTAACAACATTTTTCAATGTTTTAGTCAT40.19193857965451055No Hit
CCGTGTTGTTATCTTCAGGGGTGAGTGTGACGTGAAGTCATTATGCGATT40.19193857965451055No Hit
CACAGGTGCTGTTTTAGATAAAATTAACAAATCATCTACAGCTCATCCCA40.19193857965451055No Hit
AGACGCTCCATGCGGTGCGCGGTATTTACATATTCATGTACTCTTATATC40.19193857965451055No Hit
CACTATTTAAGGTAATTTGACAAACATTCTTTTTAAGTGTTAAATTTTTT40.19193857965451055No Hit
TGCCAGTGCTATTCTGATAAGACAGTAATCAATATACAAGAAATATTAGC40.19193857965451055No Hit
GCGGAATATCAACATTTTCATTCTTGTGGAATACATTTATCAAATTATTA30.14395393474088292No Hit
TGGGATTGTTCTTTCTAGTGCTTCTTTAGATGTAATTTTACATGACACAT30.14395393474088292No Hit
TTTACATTTCAGATAGCTTTGGGAAAATGATATGGAAGTTGAAGTTGTTC30.14395393474088292No Hit
CGAAGAACGCAAAACAAAACAAAAGACAGATGAGAATGTTCCTGAAGGGG30.14395393474088292No Hit
GGTCGATATCATCACCAGGGAAGTGTCCGCCAACGACATGAAGGAGGTCG30.14395393474088292No Hit
GTCCAGTTCGATGATAATTTACCACCTATGTTAAATGCTTTGGAAGTAGA30.14395393474088292No Hit
GTAAATACCGGTACTTATTCTTAATAAAACTTAATTTAAATTATACATTT30.14395393474088292No Hit
TCAAAAGCCAGATACACCGTCAGATCTTTTGGAATCAGAAGAAATGAAAA30.14395393474088292No Hit
GCTCCACTCAACCCCAAGGCAAACAGAGAAAAGATGACACAAATCATGTT30.14395393474088292No Hit
TAATGGAATTACAAATACATAACATTGGTTCAGGAGAATAACACATACAC30.14395393474088292No Hit
CCGACGTCTGCAACTCATAGAAGATGACTTGGAAAGAACGAATACCAAAC30.14395393474088292No Hit
GTTGAAGGTGTACTTAAAAGTAAAATATTATAATTGAGGATATTTGAATT30.14395393474088292No Hit
CGTACTTGAACCTTAAGGATGGTAGATTTTATTTGAGTTAAGTGTTTGAT30.14395393474088292No Hit
GACATCCAACAAGTCAACCCGCCTAAGTTTGAGATGACGGACGACATGGC30.14395393474088292No Hit
TGCAGGCGATGAAAATCGAAAAGGAAAATGCATTGGATAAATCCGAGCAG30.14395393474088292No Hit
GTTGAAGATTTTCCGCACAGTTTCGTTGATAGTGTTTTGTGTTTGTCATG30.14395393474088292No Hit
TAGTAGGCAATAAAAACAGATGTGTGATTCTCATGAACTTAGGGTTTATT30.14395393474088292No Hit
CTTTAGAGGTACCAATATCATGTGATGGTAAAATATTGGTCACAAAGCAG30.14395393474088292No Hit
CGGCTGAGAAGTTTCAGATTGACCCCTTGACTTTACATACGATACGTCTT30.14395393474088292No Hit
TGTTGACTTCAGGGCCAATCGTAGCCCATAATTTGTCTCCCTGCGAAGGG30.14395393474088292No Hit
TAGTACAACCCCTGTAATGTGTTACTTCTAGATCCGATGTATGGAGAGGA30.14395393474088292No Hit
TTAATATTGTACCTCGTGAACAGATTCAATAAAATCTAGTCTACTTTTGC30.14395393474088292No Hit
GTATAACAAGTTCATAGCTACATGATTGAATAAATGGTATTTTAAACAAA30.14395393474088292No Hit
CCAGCGATTCCATTGAAAATGTCAAGGCAAAGATTCAGGATAAGGAAGGC30.14395393474088292No Hit
TTCAGGATAGGGCTTCTTTGACTATAAAGAATTTAGTTCTTTATCATAAT30.14395393474088292No Hit
CCGAAAGTACAATCTTGCACAGAAGTCACAGGGTCAAGATAATCAGTTGT30.14395393474088292No Hit
CTTGAGTTATGCTGTTTTAGTAATTTTTTAGTGAGGATTCTGGTATATTT30.14395393474088292No Hit
GTGGATTTGGAGGATTCAGCGGAGGAAGCCGTGGTGGTCGTAGTGGATCC30.14395393474088292No Hit
GTGACCATTCAGATCGCGTGTGTCTGGCCAAGTCCAGTAACAAGCTTTGT30.14395393474088292No Hit
GATTCCTATATGGTACCAAGATCAGATTTAGGAGGAAGGAATGAAGTATA30.14395393474088292No Hit
GCAAAGCAAAAATACAGGATGGTAGATTTTACAAGACGGGCTCCTAGTGA30.14395393474088292No Hit
TCTCATTCTTAATATATGTCGACCTTTGCCTACACAAAGCTCCCTCATTT30.14395393474088292No Hit
CCGCCTGACCAAGGTGATCACTGAGGCATGTAAGATGGAGAGTTACAGCG30.14395393474088292No Hit
GGGAAACCGGCTACCAGTAGATGACTCGCGCACAGCAGACGACTATTTGA30.14395393474088292No Hit
TGGAGATGTACAGAAGGGAGTATGGGATAAGGTTAAAGGTAATTGGGCAT30.14395393474088292No Hit
GTGTAATAGTGTGTGGCTTGGAATATGAGTAAGGAAATGTCGTCATCAGA30.14395393474088292No Hit
CTTTAATATCTCGTAACTATATGCAATTTAGAACACCTTGTTTTACTTTC30.14395393474088292No Hit
GAAGTTTAACAATGTTTATATCAAGAATTTTAGTGAAGAGATTGATGATG30.14395393474088292No Hit
CAATTATGGTTACATTAAATGTTGTTGTATGGTGTTTAGCGTCGCTTTCG30.14395393474088292No Hit
GTTTACAGGAAAAGCTAAGAGGTCTAGGCATCAAGTATCTGTTCCCTGTG30.14395393474088292No Hit
CTTCTATAGTGTTACTATTATCCTTTAAGCATTTCTGTTCCATGTGGATG30.14395393474088292No Hit
TGGAACACTGGATACATAACCAATGAACACAAAATTGTCTCAAATCATGC30.14395393474088292No Hit
TCCAATTGTGCTATTGAGTAATATCGACATTAATTTGACAGTTTAAGATA30.14395393474088292No Hit
CAAAGATTCAGAAGGAACTAGAAGAGCAACTTCAGAAAATTGAAGAAGGT30.14395393474088292No Hit
TGGTATCGGGCCACACAGGCGTTTGAATGTATCGGTCTCATTTGTCTATG30.14395393474088292No Hit
CTGGCTCAATCGGTAAAATTGGCCAACTTTTCATTTCTGTATGAGATAGA30.14395393474088292No Hit
GGAGGTGAGCGAATCTCCGGCAATTCTACCGAGGACTTGGCAGTGCTGGA30.14395393474088292No Hit
GGCAAAGCATGATGAAGTTGTTAATCTTGTGCGTAAATCTGGCTTACATC30.14395393474088292No Hit
TTTTATCATGGCCGTTGAATATTTAAGTATTTTATAGAGTTTTATTTCTT30.14395393474088292No Hit
GTTTCTCAAAAACACAAAGCTATATGTTATTGGTGCATACCAAAACACAA30.14395393474088292No Hit

[OK]Adapter Content

Adapter graph