FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-heart-RNA-2_S10_L002_R1_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-heart-RNA-2_S10_L002_R1_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2681
Sequences flagged as poor quality0
Sequence length42-151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC351.3054830287206265No Hit
ACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC110.41029466616933974No Hit
GGCGACTGTGTCTTCAGTGAATTAAGCCGTGAAACAGCCTAACTTGAAAC60.2237970906378217No Hit
CTCATATCTTTAATGTGACTGCCTGCAATGTCATATGGAAAAAATTATAC50.18649757553151808No Hit
CTTTTTTGAATCTGAGGACTGCTCCTTTGTATGATGCAGGTGCATTGTTC50.18649757553151808No Hit
CTTGACTTGTGTAACATAGCACCGTGATGCTGTACTCTGTGTACTTCAAA50.18649757553151808No Hit
AAAGGATAATAGTAACACTACAGAAGAAGCGTTCTTTTCGCTAATTTCAG50.18649757553151808No Hit
CTGAAAGCGTCTTTGTTTACTGAACCTTTATCCATGTTGACATCTACAGA40.14919806042521447No Hit
AGCCTAAAAAACATCAATAATGTACAAACATTGTATTAGGCCATGTGTAA40.14919806042521447No Hit
TTTCAGAACACTGCCAAGGCAAAGTTTAAGATCTGCATTTCATTAAGTAT40.14919806042521447No Hit
TGTCTTTGTACTAGAATATGTCATAATATCTCCATTATCTATTATTTTGA40.14919806042521447No Hit
GCAGAACAGCAATGTTTATTTTAATACTAAACTAATATCATGAAATAACA40.14919806042521447No Hit
GCAGATTCCATTCCCAGGAAGGATGGCTGGAAAAGTGACTCTGGGCAACG30.11189854531891084No Hit
CCACCAAATGTTGGTCCATAGCCTGAGTTTCCATGCATACTGTATGTTGC30.11189854531891084No Hit
CAATAATGGCGTTGTCTGTGAGTGGGACCCTTCTGCTGTGGACCTTACCG30.11189854531891084No Hit
GGTAACGGTAATTGTCACCTTTTAGCACTAATGGCCGAAAGGGTATGCTT30.11189854531891084No Hit
CTTTGCCATGCACTGGCAGATCCAGTTGTGGAAACACAGGGTAATGACTA30.11189854531891084No Hit
GTTTTCATATCATGTAATGTCAACTTCTTAAATAAACTGCCTCACAACTT30.11189854531891084No Hit
CACGGCAGTATTTAACAACGGCACCCCAAAAGCATTAATGGGCAAAACCC30.11189854531891084No Hit
TCAAGCTACTATAGTTAACCCTAACAAACTAAATGACACTAAAAACATCC30.11189854531891084No Hit
GTAGAATTGTAGCATAGTGGCATCCAGGGCGACGGAGAGAGGTCCAACGT30.11189854531891084No Hit
GCCAACCGTAAATATGTGATGACCCCATACTACGAAGCCTAATAACCCAA30.11189854531891084No Hit
TCTCACTTGACAAAAAACGAAAATGACATTTTCTAAATTCTCTGAAATTA30.11189854531891084No Hit
AGGGGCGTAGCTAGCCTAAGTAAGATGTATAGGCCCGCCGAAAACAATTA30.11189854531891084No Hit
CGGATATTCCAGTTTGTACCATCTCCTCAGGGTAGATACGTGACCAAGGA30.11189854531891084No Hit
CAACAAATAATTATTAAAAGAGGCATCGACGCACAAACAGTATATATTAT30.11189854531891084No Hit
AGACACACTCCGCCGACGTTGTTTTTATTGTCATCATTATCGAAGTACTT30.11189854531891084No Hit
GTTTAACCAGAGTTACCTTCCTTTTATGTTAAGAACAAGAAAAATACTGT30.11189854531891084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)