FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-gonad-RNA-6_S41_L006_R2_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-gonad-RNA-6_S41_L006_R2_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences191
Sequences flagged as poor quality0
Sequence length100-151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC168.37696335078534No Hit
TTACGTGCAACATTCCGACAATATACACAACTAGTACCAATCCCTCTAGT136.806282722513089No Hit
GTACTTCTGTGACAAATATTGCAATAGTCGAGCACCCTGTCCCTTTGACA73.664921465968586No Hit
GGGTACCCTGTACGCTATTAGTCGTGTACACTCTAACACCTGCATTGAAT63.1413612565445024No Hit
AGAACCCCCGTCAATACAAAATTCCAGACTGGTTCCTCAACAGACAGAAG63.1413612565445024No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG52.6178010471204187Illumina Single End PCR Primer 1 (100% over 50bp)
GAATGCATATATCATTATTCAGTTTGTTTTTGTAAATTATATACATGCGA42.094240837696335No Hit
ACATCTTAACCTCTTCAGCAAAACTGTTACCATAGTTTGATACCTATTCG42.094240837696335No Hit
TTGCGCATGATCAAGAAAAGGAAGGATAAGAAAACCATAGGACAGGTGGA31.5706806282722512No Hit
AATCGGTATGCTCTACCATCAGCCCACTACAGTGACAGTGATTTCGCGCA31.5706806282722512No Hit
GCAAAATATACCGGGTCAGATGATGAAGATGTCGATATCAAAGCTCTTCT31.5706806282722512No Hit
TGGCCTCAGATCAACAAACAAGACAAAGATGTCTGAATTAGATATGATAT31.5706806282722512No Hit
GGGACAGAAGGACAGCTACGTCGGTGATGAGGCCCAGAGTAAGAGAGGTA31.5706806282722512No Hit
CCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC21.0471204188481675No Hit
GCCTTTTTTACCATCTAGGGCCATGTCCGACTCCGAAGACCAACCGGAGA21.0471204188481675No Hit
GTCAAATATCAGTATTTACAAACCCGAAGATGATTTTTCTAGTAAAATCT21.0471204188481675No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAC21.0471204188481675No Hit
CCAGTGGTAACCGTGGTGGTCGAGGTGGCAACAGAGGTGGCAACTTTAAC10.5235602094240838No Hit
CTCCCCACCATCCCCCCCCCCCCCCCCACCCCCCCTCCCCCAACCACCCC10.5235602094240838No Hit
GCCTTTTTTTTTTTTTTTTTCCATGTCCGACTCCGAAGACCAACCGGAGA10.5235602094240838No Hit
GTGTACCCTGTACGCTATTAGTCGTGTACACTCTAACACCTGCATTGAAT10.5235602094240838No Hit
GTCACACTGGTATTGAAGACGCCACTCTTGTACTAAACATAACATGGTAT10.5235602094240838No Hit
CCCACCCCTCCCCCCCACATCCCCCCCACCCCCCCCCCCAGACCCACCCC10.5235602094240838No Hit
TTCAGGTCACTATTCCATCATGTTAACCATTTTCATTTACCCTTTTTCTC10.5235602094240838No Hit
TAGCCTTCCTTTCCCATGATTTCCATTAGAACAATCACAGAGCCAGGTCA10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCA10.5235602094240838No Hit
CCCCCCCCCCCTCCACCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
CTCAATTATAAACACTTGAAGATACACAAATATCATCCGCTCTGTCGATA10.5235602094240838No Hit
CCCATATTCATGGATAGTTTTTCATTGTTTTATATAGCTTAATCGTCTTG10.5235602094240838No Hit
CTATGGGGAACACGATGAAGATATATTACTTAAAATAGGAATGGCAGCCA10.5235602094240838No Hit
ACCCCCCCCCCCCCCCCCTCCCCACCCCCCCCCCCCCCCCCCCCCCCCGC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCACCCCCCCCCACCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
GAAGAGTGCTAAAAGTAGACGTAATTCCGTGACAACACCTGTAGTAGGAT10.5235602094240838No Hit
CCCCCCCCCACCCCCCCCCACCCCCCCCCCCCCCCCTACACCCCCCCCAC10.5235602094240838No Hit
CCTCAATGAAAGTAGTTCCCAAATTAATTTGGTTGCTAAATAATCAGTAA10.5235602094240838No Hit
TTTTAATCAGATTCAGAGAAGTTTGGAAATTAAAACAAATATGTATAACC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCACCCCCCC10.5235602094240838No Hit
CTACTGTACAATGGCCCAAGCTCAGCTGTCTTTCCATGGTCACCGTGATG10.5235602094240838No Hit
ACTACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.5235602094240838No Hit
CCCGCCCCACCCCCCCCCCCCCCCCCATCCCGTCCCCCCCCCCCCCCACC10.5235602094240838No Hit
CCCCCCCCCCCCCCCATCACCCTCCCCCCCCCCCGCCCCCACCACCCCGC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCA10.5235602094240838No Hit
TGATTGTAGCATTAGCCAGTTGGCTCTTTTATGATTCATTTTATAGATGC10.5235602094240838No Hit
CCCCACCCCCCCCCCCCCCCACCCCCACCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
GGTAGCCTGACCATTAGCTGTTCTCCATGGCAAAATTAAAAGAACTTGAA10.5235602094240838No Hit
GGACTTCTCCATAACCAAGGATGAAGTAAAAGCGAGCAAGATGCGTGTTG10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACGCCACCCCTCAACACCCC10.5235602094240838No Hit
TTTTTTTTACACTTCTATTATTCCATACTGCCTTTTAATATAAATTAGTT10.5235602094240838No Hit
CCCGAAACAAACAAATCTGGAAGATGTCGGTAAAATTTGCAAACAGCAAT10.5235602094240838No Hit
CACCCCCGCCCCTCCCCCCCCCACCCCCACCCCCCCCCCCACCCCCCCCC10.5235602094240838No Hit
TTGGACTTCAAACCTATTGCCTCCGGTACTGGTTATAAACAATTGTTAGG10.5235602094240838No Hit
GCAGTATGTATCCCTCGCCAATAGACGCACCTGGAGTACTTGAAGCATGT10.5235602094240838No Hit
CCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCACCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCACCGCCCTC10.5235602094240838No Hit
CAGACTGTAAATTATTAGATAATATCTCATTGTTTCATATATCGTTGATG10.5235602094240838No Hit
AGTTTTGATTCTTCCCTAGACGGTTCATCGTTTCACATGCATTTAAAGAA10.5235602094240838No Hit
TCAATATATTTAAAATTTCACAAGTTTTCATATCTAGTACAATTGATTAT10.5235602094240838No Hit
TTTTATAGATATGCATTACATAAGCGATAAAGTCATTGTTTTTAAAGTAT10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCACACC10.5235602094240838No Hit
CCCCCCCCCCCCCCTCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCACCC10.5235602094240838No Hit
TGCCAAGCTAAAGCAAAGTTCTTTTGGTGATAAAATAATTTGTATTTATG10.5235602094240838No Hit
CCCCCCCCCCCCCCCCGCCCCCCCCCCTCCCACACCCCCCCCCCCCCCCC10.5235602094240838No Hit
GTTTATTTGTCTGGATTCTATGCTCAAAGTCGTCAAATATTTATTCTTTT10.5235602094240838No Hit
CCCCCTCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCAACCCACCACCC10.5235602094240838No Hit
CACACTGGCTCAATCTAGGTCCACAGAGTGGTCGGGTCCACAGGGTGATT10.5235602094240838No Hit
CCCCCACGCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCAACCCCCC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCACGCCCCCCCCCCTCC10.5235602094240838No Hit
TGAGAAGGCACTTGGAGTCCTTTTGCACTAGTCGATCAAATTTGATGCAT10.5235602094240838No Hit
TGGCAGTTCAAATTAATGAAATGTACTTCAAGATGCATTCATCGTAGAAT10.5235602094240838No Hit
CCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCAA10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCACCCACCCCCACC10.5235602094240838No Hit
TGCAGAACCTAATGTACGTTTAAGGGATTTTATCAGGAAAAAAACCGCTA10.5235602094240838No Hit
CCTTCGTCTTCCTCTGCAGGATGTTTACAAAATTGGAGGTATTGGAACAG10.5235602094240838No Hit
AACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCACCCCCCCCCGAGGC10.5235602094240838No Hit
TTTTATGTGTACTAATTTCTTTCTGTTTGTTGTTCATAGTTTTTAATTTA10.5235602094240838No Hit
AACCCCCCCCCCCCCCACCACCCCCCCCCCCCACCCCCGCACCCCCCACA10.5235602094240838No Hit
GTTTTGGTGCTGAATAATAACTTTTTGTTAGTCCTGAGAGTTTTAATTTT10.5235602094240838No Hit
CCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCACCAAACCCCCCCCCC10.5235602094240838No Hit
CCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCC10.5235602094240838No Hit
AAGAAATAAGCCAGAGAATGAACAAACATAACAAACCTATCGCGCCAGCA10.5235602094240838No Hit
GAAATCTGTGAGAGGCTGCATTGTCGATGCTAACCTTAGTGTACTTGCTA10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCACCACCCCCCCCCCCCCCCCCCCCCCCCCACC10.5235602094240838No Hit
GCACCTTGGATGCCATAATTCATCAAAAGGATGTCATTTTAAATAGAAGC10.5235602094240838No Hit
TTCTCCTTCCTGAAAAAGTACTAGCTACATTAAGTGTATAATCTAGAAAG10.5235602094240838No Hit
GTCAAGGCTAAAATTCAAGACAAAGAAGGCATTCCCCCAGATCAGCAGAG10.5235602094240838No Hit
GATGGGCTCCCCTGTGGGGCCTCCTGAAGCCCAAGCCCCTCCCATAGAGA10.5235602094240838No Hit
ATAATAATATGGTTATAATTCACCAAAATTTATGGACTTTGTTGGAACAT10.5235602094240838No Hit
CCCCCCCCCCACCCCCCCCCCCCCCCCCCCCACAACCCCACACCCCCCCG10.5235602094240838No Hit
GTCAGCTTACTGTGATAGAGCGGGATTGAAATTGGGTGTTGTGAGATTTA10.5235602094240838No Hit
CACCCACCCCACCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
GTTCGTTTTAAGAATCATTCGTTTGATATGGAATTTTATTTTTTTGATTA10.5235602094240838No Hit
CGACCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCACCCCCCACCCCCCC10.5235602094240838No Hit
TGTTGGTAGAGTGTCCAATTTTCAATCCAGGGGTTTGGAGTTTGAATACC10.5235602094240838No Hit
CACCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCACCCCCGC10.5235602094240838No Hit
CCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCC10.5235602094240838No Hit
CCCCCCCACCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
CCCCCCCCACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
AGGGTATGGAGGAAGGATTATGAAGAAGTTGGCGTCGACTCTGTTGAAGG10.5235602094240838No Hit
CCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCACCCACCCCCCCCCCA10.5235602094240838No Hit
CCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCA10.5235602094240838No Hit
GGACTCGAGAGGGTTTCATATAAGCTGTGAGCTTTCATTGCAATCAAGCT10.5235602094240838No Hit
TATTTTTAGAAAAATGTGTACTTTAACTATGGCAATGTTTTTTTTTTTCT10.5235602094240838No Hit
ACCACATATAGCAACTTCAGCATCACGGCAGCGAAGTGCCAGTAAATTCA10.5235602094240838No Hit
GAGTGTTGTTGTTCAACCATTTCATGATTAAAAGTACTTTTTGTCTTCCA10.5235602094240838No Hit
CCCCCCCCGCACACCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCGCC10.5235602094240838No Hit
TCAGGAGATGTGCAATTCAGGTAGAGAATGTGAGTGCTTCTAATGATGAG10.5235602094240838No Hit
CCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCACCCCACCCAC10.5235602094240838No Hit
CCCCACCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
TCGGGATTCAATGGATTATATAAAGACAACGAAACAAGTTCTGAGAACAC10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCA10.5235602094240838No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCACCCCCCCCACC10.5235602094240838No Hit
GTAAATAAATAACCTTAAACTTATTCAGTGCTTAACAATGTACATGTATG10.5235602094240838No Hit
AATAAGTTCTGCTGTTTGGTGCAAATGACCTTTATAAACAATGTTAAAAG10.5235602094240838No Hit
TGACAGAGTTTTTCCATGTACAATCATGATCGGTCAAATTGCTTTTTAAA10.5235602094240838No Hit
TGGCCACTACCTTGGAGAGTTCAGTATCTCGTACAAGCCAGTAAAGCACG10.5235602094240838No Hit
CCACCCCGCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCC10.5235602094240838No Hit
CCCGCCAACCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCTCCCCACC10.5235602094240838No Hit
CACCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit
GTTTATTTGTGATTGATCGTGTCTCCACGCACGAATGTATTTCTAACAAG10.5235602094240838No Hit
CCCCCCCCCCCCACCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCC10.5235602094240838No Hit

[OK]Adapter Content

Adapter graph