FastQCFastQC Report
Thu 8 Sep 2022
Geoduck-ctenidia-RNA-1_S3_L001_R2_001.fastp-trim.20220908.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameGeoduck-ctenidia-RNA-1_S3_L001_R2_001.fastp-trim.20220908.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3245
Sequences flagged as poor quality0
Sequence length32-151
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG1554.776579352850539Illumina Single End PCR Primer 1 (100% over 50bp)
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT140.43143297380585516Illumina Single End PCR Primer 1 (100% over 50bp)
TTCAATCCCTGCAAATATAGAAAAAAATTCCAACATGCAAAATTTTATAT130.40061633281972264No Hit
GTCTGTATCACCGTCTTATTTAATGGACAGCCTACATCAAGGGAGACCAC120.3697996918335901No Hit
GACATAGCCAGGTTATATGTAGAAAACAAAATCTTTACACTGACTGTACA120.3697996918335901No Hit
TTTCAGTCTGTTTGAGATTTCGTGTCACGCCTGTAACTTTGTCATGCATA120.3697996918335901No Hit
ATTCTTAAGGTTTACAATTCAAAAAGATTTAGAGCTGGTAAAGGTAAAAT100.30816640986132515No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.30816640986132515No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC100.30816640986132515No Hit
TTCTAGTGCACTTTTTAGAAAGACAAAAAAAAGTAACTCTGGTTGTGTAA100.30816640986132515No Hit
TGGTTTATGATTCGAGGAATCAACCAGTTTATTGAATATGTAGATACAAT100.30816640986132515No Hit
GTTTGTTTACAAGTTGATTTGATGGTGTGTAAATTTCATAGAAGTTTGTT100.30816640986132515No Hit
GCCAAATGTTTTACATGTTATATGCTGAATGAAGATTATTCCAACTGTGA90.2773497688751926No Hit
CTGAATTGCCGCAAAATGTTATGGATATTGATTCTGAAATTATATATACA90.2773497688751926No Hit
CTGAGTTGTTAGCTTAATTCATTTTACAAAATAACAAATCCTTCGTTCAT90.2773497688751926No Hit
TGGCATTGGCCCAGCATGCACAAAACATCACAAACACAAAAACTACAGAC90.2773497688751926No Hit
ATGTTGTAGTTTCACAACTGCATATAAATATAAAATGATGTTTGAAAATT90.2773497688751926No Hit
AAAAGACATTTTAATACGCAATTTAAAAACATCTTATTTTCTAGGATAAT90.2773497688751926No Hit
GCAGAATATGCTGAAACTTATTGTCGGTATGAAGATTCTAGGTTCATTTA80.2465331278890601No Hit
GGACTCATTACAAACATCAGCTATCTAAATATTGAATAAAATAGCAATAG80.2465331278890601No Hit
GTTGTACACAAAATTTGTAAAATCACACACACATTAACAACAAATATTTG80.2465331278890601No Hit
TGCTATGCCTGTGTTGGCGGGGGCTATTACAATATTATTAACAGATCGTA80.2465331278890601No Hit
GGCAAGTAACTGATAACTTTCCCACTTGAATCAGTGGTGAGAGATGAATG80.2465331278890601No Hit
GTGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTTAGCGGGTTCATCTGTGT80.2465331278890601No Hit
GAAGTATATCGCCTGCTAGAGGTCGATAGTCGGTTTGTTTTGCCTAGAGG80.2465331278890601No Hit
CTACACTAGACCATTGTCTGTAAGCTTACAACCGAAATACTGTGATTGAC80.2465331278890601No Hit
CAGCATCAGAGATTTTTATATTTAATATTTGATTAAGGTCTTATTCAGGA80.2465331278890601No Hit
AATATGACTGCCAACCCAGGGGTTGTGAGTTTGAATACTCGCCCACCACA80.2465331278890601No Hit
GCCAGACCTTCAAATACAACACCAAGGTCCGATCTGGTAGAGGTTTCACA80.2465331278890601No Hit
GGCCGTGCCAACTGCAGATAAAGTTCAGGAAATCAGGGAGGTGACAAGAA80.2465331278890601No Hit
GTGTTATAGTAAATGGCAGACATTAAGGGACAATTGTGTCGGTTGTCTGG70.21571648690292758No Hit
CTTCTAAAGGAAAGGAAACAATAACCTAAATAACATATTTAACCTTTCAA70.21571648690292758No Hit
GGAATTGACACCCGTGGGTTTCCGACGATGAGCTATATCCGGAATGCTTC70.21571648690292758No Hit
GCCATATATAACCTGAAATGTGTTGAAAACGGCATTAAGCCCCATTCCAA70.21571648690292758No Hit
CTTATGTGAACTTCTATTGTTATCATAGAAAGACATGAAATGGACAAGAG70.21571648690292758No Hit
CCACAGTTAGCAATAAAAATGTGAAGCAAGTGTATTGTACTGAAAATGAA70.21571648690292758No Hit
CTGGGTATAACTGTCCAATTAAGGAGCGGATGCTGTACTCCAGTTGTAAA70.21571648690292758No Hit
ATAAAGACATTGGAGTCTTATATTTTATCTTTGCTATTTGAGCTGGTATA70.21571648690292758No Hit
ATTTTAAACAAGATTTCACCTAAGGCCATGTTAAGATAATAGATCTTTGA70.21571648690292758No Hit
GTGCATTAATGTTACACTACACAAACTATTTATACTATTGTTGTTCACTA70.21571648690292758No Hit
TCAAAATGAGAGAAATCGTTCACATGCAAGCCGGCCAGTGCGGTAACCAA70.21571648690292758No Hit
GTTTTATTTACACATCCGTATCTGACATCTGTGACAAATCTTTGTATTGG70.21571648690292758No Hit
CAACACTTTGGAACTTTACAAATATTGACATAATCACTTGAAATTCCTCT70.21571648690292758No Hit
GTTTTGACCTGTATTATAATAAGTTTACGTTTTTGAAGTGACAATTTGTG60.18489984591679506No Hit
GCAGTCGGAGGGGCAAGGGGGTGATTCAATGTTGTGAATAAAATATTATT60.18489984591679506No Hit
AAGAATCCAAGCAAGGAACCAGTCCATTTTCCAACAAAATATGGAAATCC60.18489984591679506No Hit
GGTGAGGCCCTCCTCAATTATTCTACAAAGTTTCATATGAATTTATTTAT60.18489984591679506No Hit
CTACATAGCCCATGGAGACGACAAAGGCAAACTGTGCGTTGTTGTGGATG60.18489984591679506No Hit
TGCAGGTTGGGGTGTCATGGTATCACACAGGAGTGGTGAGACAGAAGACA60.18489984591679506No Hit
GTCCATCCGTCTGTCCATCCTTCTGTCCATCCTTCCGTCTGGTATTTCGT60.18489984591679506No Hit
CTTGTACATACATTAAATGGTAATGGGTTTGGTATATTTCCATTGTCATA60.18489984591679506No Hit
AGGGTGTCACTTTAGGTATAGAGTGCATGGCGAAAGATTGTGAGATGATG60.18489984591679506No Hit
CCATTCTTTACATATTCATTTTTAAACATTGATGCATAATTATGCAAATT60.18489984591679506No Hit
TGAACTTTGGTATCTGTTTTTAACCTGTTCTCCTTTTAAAATTGATGGAA60.18489984591679506No Hit
TGTAGTTGGTGTTTGAGTAGCTATATTTGTAATCAGATATGTCTATGTTA60.18489984591679506No Hit
TGACATGAGGCAAACCGTGGCCGTGGGTGTCATTAAGGAGGTGACAAAGG60.18489984591679506No Hit
TTTGGAGTGTTGATGTGGGAAGTATTTACAAACGGTTTCCTTCCCTACCA60.18489984591679506No Hit
TGGATACATTTATTGGGAAAACAGCTCACGAAATTGCCAAGAAGAAAACG60.18489984591679506No Hit
TGCTTAATAGAGGTGACCGCTTATAAAGGTTTGACTAGTTTAAAAATTCA60.18489984591679506No Hit
CACGAGCAGCTCTCCGTTGCCGAGATCACCAACGCTTGCTTCGAGCCAGC60.18489984591679506No Hit
CAAGAACGACATCAGCTACTACCACTCCGGCTGAAACAACAACGACATCA60.18489984591679506No Hit
TTCATTTCTCATGTGATATATAACATTTTTATATGATTTAAGTTATTATT60.18489984591679506No Hit
TACAACTCATTTTGTTTCATATGAAGACGTGTTATCTTGGTGAAATGAAA60.18489984591679506No Hit
TGTGGCCATTCAAATTGAACACGCCTAATGGTGGCTGGAAACGAAAGTAT60.18489984591679506No Hit
GATACCTATAATAGTGGGTGGTTTTGGGAATTTTTTAGTTCCTTTGATAC60.18489984591679506No Hit
TTATATTTGTGGTGTATGTCATAACTGTAAATAAATGTGACAATGATAAA60.18489984591679506No Hit
TTCAGGATCCCAGGAAACAATGGTAAGGTCGATGGCATAAAAATGACGCT60.18489984591679506No Hit
GTTTTGAGTATTTGCCTGTTGACAGATACTTATATACAGAAAATTTAGGG50.15408320493066258No Hit
GCCGACAAGGCTTGGAACTATCCTCTAAATGCTGAGCACCAAGCGTGGAA50.15408320493066258No Hit
GGGGGATTCAGGATTCCCGTTTTTTTAGCGGGTTGTGGTTTAAGCTCCCG50.15408320493066258No Hit
GGACCTGGCACCAACATCTGTTGTATTGTGTAATATGCTATAGTTAGTTC50.15408320493066258No Hit
CATGCGTTTATGCTGCCCTCATCCTCGCCGATGACCAAGTAGCCATCACT50.15408320493066258No Hit
GCTACATCGCTGTTCTCGCTCAGTAGATTTGTCTTAACACTCATTCCAAA50.15408320493066258No Hit
GTCAATATGCTTCCACAATTGGTCGACAATAACAACAACAGTGTAAAAGA50.15408320493066258No Hit
TTTAAGTTTAGTTGTTTATTTTATTGCTTCGTCGGACATGTTCCCTTTTA50.15408320493066258No Hit
GGTCAATGATCGATGGTGCAGGCGCATACCACCGAAACTGATATACACTG50.15408320493066258No Hit
ATATCTACAGACAAGAAGGTTCGGATATTTAAAGTAATGACTGGAAAGAT50.15408320493066258No Hit
AAAGATGAATGGTATGGGAATTTAAAGTATTTCCTTTTCATAGCAATTAA50.15408320493066258No Hit
AAATCTGGTACTATCTTCGATAACTTTTTAATAACCGACGATGTTGCTGA50.15408320493066258No Hit
TGTAATTCAAGAGAAAAAAGTTCCATTCCATGTCAATATATTATAATCAT50.15408320493066258No Hit
TATATATATAACATTGTAGAAGCTAGTTATGATGTCCAAAGAGATACATG50.15408320493066258No Hit
TGGTATTGCTCTTGCATTCATACAGATAATCGGAATCATCTTCGCCTGCT50.15408320493066258No Hit
GCAGTTAATGTTTCAGGATAGGGCTTCTTTGACTATAAAGAATTTAGTTC50.15408320493066258No Hit
CTCGAGCACCCTCAATCTCAGCAAGTAACTGATAACTTTTCCACTTCAAA50.15408320493066258No Hit
GAATGGAAGATATTGGTCAAACTGTCTCAGAACATGTGGACACTGTAAGA50.15408320493066258No Hit
GGCAAATCTGATATTTGGAGACATGTTGGCCTCAAGCAAAGTCGCGGTAT50.15408320493066258No Hit
GGCAACTCCTACTAAACCTGTGGGCATGCCGACTGAAAAAAGGAAACCAA50.15408320493066258No Hit
TGCATACCAAGTGAGAGACTTTTGTGATCTTTCTAATGGACCATATGCAG50.15408320493066258No Hit
GTGATCCTCGTCACGGCAGATACCTTACCGTCGCCGCCATGTTCCGTGGA50.15408320493066258No Hit
TGGGGCTTCGTTGTTTTTTAGTTGTATATACATTCATATTGGTCGTGGAA50.15408320493066258No Hit
AAACATTATGAGTCGACCTGTACCATGATATTACCTATATGTCCTCAAAC50.15408320493066258No Hit
TGAGACTGGCCGCTGGAACATGAAAGAAGTACCAGGTTCAGAGAAAGTGT50.15408320493066258No Hit
GCTGTCTGTTATTCAGCAAAGGCCTATCATGAGCGGATCTGCTGGGATGA50.15408320493066258No Hit
AACCAAGTTAAAAAATACAATACATACACGGACATACTGTTGCTTCATTG50.15408320493066258No Hit
CGGTTGACAAGGTAGCCCAAGATGGAGCTGGCCTGGCGTTTGTTGTTTAT50.15408320493066258No Hit
GAGATAACAGAAATCTCTGTTTAAATTATTTACACAATGTTAATGAAGTA50.15408320493066258No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.15408320493066258No Hit
GTTGTCTACCGTGTGCGTGTTCGCCGTGGAGGACGTAAAAGGCCAGTACC50.15408320493066258No Hit
CAGTGATATAAGAGTAGTTCCAGCCCTGCGAGGTGGGCGTCAGTTTTGAA50.15408320493066258No Hit
TTTATGAATATATGTATTGCTGTATTTTAGAATTAAATGTTGAATATTAA50.15408320493066258No Hit
GATTTATTCCAAACAGCCAATCTAACGGACAGAGGGAACGGATTCCCGCA50.15408320493066258No Hit
TTAACATATACTTGATATGCTGACTGTGGGGAAATAAGACTTTTTTATGT50.15408320493066258No Hit
GTTTGATCCACTGCCACGGCAATGTATTGTGTCCTTGAGCTGAAAGACAC50.15408320493066258No Hit
GTCCAGTCTTCCTTTTGTCAGCTTTACCACCCTAAATTCCACGCGATTGT50.15408320493066258No Hit
TGCATACTTTGTATACCAGTAACATATCAAATGAGTTTCATGACTTCAGT50.15408320493066258No Hit
AGAACACACCAATATGGATAGTGATGACCTTGTCCCCAGTCTACAGGCTG50.15408320493066258No Hit
TTGGTTAAGTTATAATATAGACAAAATTAGCTGTGATATTTTAACAACAT40.12326656394453005No Hit
AAAACTTCAAGAACCCTGAAACCATTCTCCTGTTAGCGTTTGCCATCATC40.12326656394453005No Hit
AAGTTGGACACCTCAATATTATTTTGATTTAAAGTCGGACATGCCATAAT40.12326656394453005No Hit
GTAAAACTTGTGATCTCGAAAAAAAATGGCAGTACATTGAATATGTATGT40.12326656394453005No Hit
CACGATTGTGGAGCCTCATCAGTTGACGCAACAAAAGGTTGAGGAGAGGC40.12326656394453005No Hit
GTTTAGCGGTAGTTCATCTTATTTTTCTTCATCAGACAGGGTCAAACAAT40.12326656394453005No Hit
TAGAAATGCAGGCTAGTTTTAAGTTTTATGAACATAAAGTGCAAAGTTTG40.12326656394453005No Hit
CGAAAGTTGTGGAGCATGTGAAGTGTACAGGGACAGATCAAGTGGACAAG40.12326656394453005No Hit
CCGCCATTGCCACCATCAAGACCAAGAGAACCATCCAGTTTGTCGACTGG40.12326656394453005No Hit
CTTCTCTCCCAGAGAAGGTGTTGCATAGTTTGTATTTCTCCAGTTTAGAT40.12326656394453005No Hit
ATTTCCTGAAAATGTAAATATTTATTAAAAATTGATTAATACATCAATCT40.12326656394453005No Hit
GTTGCATTGGTTATTTAAGTCAGACAAATAGGCCATGTTGTCCGTATGCA40.12326656394453005No Hit
GTTCCATTCATTATTGAAATTGCTAATTTGAGGTTAAGATTTTAAAATTT40.12326656394453005No Hit
CCCAAAGGAAACAGTTAGATTTATTTTGACATTCGCTTGTAACGGAATAA40.12326656394453005No Hit
CGGGAAGTTGCTCTCCGTCGTACATAATTTTGGACTTAAAGTCGGCTTCG40.12326656394453005No Hit
ACCAAGTCCATGGATCTGTGGACCGGTCACTGTCAGAAAAAACTAAAGGC40.12326656394453005No Hit
GCTGTCTGCGTTGGAACAGTTACTGATGACTTGAGGCTTCTACAGGTCCC40.12326656394453005No Hit
AAAACAATAATTCAACCGTTGACAAAGGAAGGTCTCGCTAACAACATCTA40.12326656394453005No Hit
TGAAAAATGAGTGAATAATTTAAAATGGCATTAATTGGCTAAATATATTA40.12326656394453005No Hit
CCGAGATCACCAACGCTTGCTTTGAGCCAGCCAACCAGATGGTGAAATGT40.12326656394453005No Hit
CTCAAGTTGAGATTTTCCTCAATTCCATTCTTTGAAACTGCCACAACTTC40.12326656394453005No Hit
TTCAGACCCTTGCTAGTTACAGCTACAGAAAATGGTCCAATTGTAAAAGT40.12326656394453005No Hit
TGAGATTCGATGGTGCCCTCAACGTCGACTTGACTGAGTTCCAGACCAAC40.12326656394453005No Hit
CTTATCTCTAAATAAATAAATAAAATAAAATAAATAAATTTTTTGTCCAT40.12326656394453005No Hit
GTGGAACAGATTGAGAGCAAGTGATAGTGGATCGTTAATGAAAAAACATC40.12326656394453005No Hit
CTTAACGCAACATATATACCCATTGCATAAATCTCAAACATAAAATATAT40.12326656394453005No Hit
CGGCAACATAACGTCTTTGGTCATTTATAAAGTATAATTACAAGAAGAAT40.12326656394453005No Hit
ATTGATGTGTTGGTACTTTGTAAAATCCTAATTGTTTCCTGACATGCTCA40.12326656394453005No Hit
GGAAGCAAAACAAAGTTGACAGTATACTAACTTTCCATATTACGTGATAA40.12326656394453005No Hit
GCGATGTTGTCTCTTCGGCAGATGCTCCGTGCTTCAGAAGATTTCATGTT40.12326656394453005No Hit
ACTAAATCTATAAATCATGCTTGCAGCTGGACGCCGATTGTTTTCGGCTG40.12326656394453005No Hit
CAGATGACAAGTCCCAAAATCAACGCCATCGTAAAACACACGGGACATAA40.12326656394453005No Hit
GTACACTTGTCACCAAGGCTGGGCATTGACTTTGACGTGCTTTTCGTCAG40.12326656394453005No Hit
TTTTTTTATGTAAACACTATAATCTTTATTGGGACAATGAATTAACTGTC40.12326656394453005No Hit
GTGGTGTCCTTGAGCAAAGACATTTCATCCGCATATGCTTAATATTGGTT40.12326656394453005No Hit
CGAAAGGGGCATTCAATAGAGTTACATTTTTTTCCAATTCCACAACTCTC40.12326656394453005No Hit
CTACAATTGATGGTGCATATAATACTTGTGGTGTACACTGAAGGTGTGTA40.12326656394453005No Hit

[OK]Adapter Content

Adapter graph