Module Section Sample Name Source Bowtie 2 / HiSAT2 all_sections NPLL44_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPLL44/NPLL44_hisat2.err Bowtie 2 / HiSAT2 all_sections PSL16_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PSL16/PSL16_hisat2.err Bowtie 2 / HiSAT2 all_sections PLL55_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PLL55/PLL55_hisat2.err Bowtie 2 / HiSAT2 all_sections PLL43_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PLL43/PLL43_hisat2.err Bowtie 2 / HiSAT2 all_sections PSL63_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PSL63/PSL63_hisat2.err Bowtie 2 / HiSAT2 all_sections PSL13_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PSL13/PSL13_hisat2.err Bowtie 2 / HiSAT2 all_sections PLL62_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PLL62/PLL62_hisat2.err Bowtie 2 / HiSAT2 all_sections PLL20_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PLL20/PLL20_hisat2.err Bowtie 2 / HiSAT2 all_sections NPLL61_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPLL61/NPLL61_hisat2.err Bowtie 2 / HiSAT2 all_sections NPSL58_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPSL58/NPSL58_hisat2.err Bowtie 2 / HiSAT2 all_sections PLL31_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PLL31/PLL31_hisat2.err Bowtie 2 / HiSAT2 all_sections NPSL15_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPSL15/NPSL15_hisat2.err Bowtie 2 / HiSAT2 all_sections NPLL32_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPLL32/NPLL32_hisat2.err Bowtie 2 / HiSAT2 all_sections NPSL29_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPSL29/NPSL29_hisat2.err Bowtie 2 / HiSAT2 all_sections NPSL24_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPSL24/NPSL24_hisat2.err Bowtie 2 / HiSAT2 all_sections PSL53_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PSL53/PSL53_hisat2.err Bowtie 2 / HiSAT2 all_sections PSL35_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PSL35/PSL35_hisat2.err Bowtie 2 / HiSAT2 all_sections PSL49_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PSL49/PSL49_hisat2.err Bowtie 2 / HiSAT2 all_sections NPLL46_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPLL46/NPLL46_hisat2.err Bowtie 2 / HiSAT2 all_sections PLL59_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/PLL59/PLL59_hisat2.err Bowtie 2 / HiSAT2 all_sections NPSL50_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPSL50/NPSL50_hisat2.err Bowtie 2 / HiSAT2 all_sections NPLL56_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPLL56/NPLL56_hisat2.err Bowtie 2 / HiSAT2 all_sections NPSL36_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPSL36/NPSL36_hisat2.err Bowtie 2 / HiSAT2 all_sections NPLL34_hisat2.err /gscratch/scrubbed/samwhite/outputs/20220810-snam-hisat2-GCF_016432855.1_index-align-stringtie_isoforms/NPLL34/NPLL34_hisat2.err