# This file was produced by samtools stats (1.9+htslib-1.9) and can be plotted using plot-bamstats
# This file contains statistics for all reads.
# The command line was:  stats sorted.bam
# CHK, Checksum	[2]Read Names	[3]Sequences	[4]Qualities
# CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow)
CHK	de68c2b9	c7af2868	52d176e6
# Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part.
SN	raw total sequences:	3545106
SN	filtered sequences:	0
SN	sequences:	3545106
SN	is sorted:	1
SN	1st fragments:	3545106
SN	last fragments:	0
SN	reads mapped:	3545106
SN	reads mapped and paired:	0	# paired-end technology bit set + both mates mapped
SN	reads unmapped:	0
SN	reads properly paired:	0	# proper-pair bit set
SN	reads paired:	0	# paired-end technology bit set
SN	reads duplicated:	0	# PCR or optical duplicate bit set
SN	reads MQ0:	1682052	# mapped and MQ=0
SN	reads QC failed:	0
SN	non-primary alignments:	0
SN	total length:	178076956	# ignores clipping
SN	total first fragment length:	178076956	# ignores clipping
SN	total last fragment length:	0	# ignores clipping
SN	bases mapped:	178076956	# ignores clipping
SN	bases mapped (cigar):	176378815	# more accurate
SN	bases trimmed:	0
SN	bases duplicated:	0
SN	mismatches:	3070461	# from NM fields
SN	error rate:	1.740833e-02	# mismatches / bases mapped (cigar)
SN	average length:	50
SN	average first fragment length:	50
SN	average last fragment length:	0
SN	maximum length:	51
SN	maximum first fragment length:	0
SN	maximum last fragment length:	0
SN	average quality:	34.3
SN	insert size average:	0.0
SN	insert size standard deviation:	0.0
SN	inward oriented pairs:	0
SN	outward oriented pairs:	0
SN	pairs with other orientation:	0
SN	pairs on different chromosomes:	0
SN	percentage of properly paired reads (%):	0.0
# First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part.
# Columns correspond to qualities and rows to cycles. First column is the cycle number.
# Last Fragment Qualities. Use `grep ^LFQ | cut -f 2-` to extract this part.
# Columns correspond to qualities and rows to cycles. First column is the cycle number.
# GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part.
GCF	0.75	8577
GCF	1.76	5874
GCF	2.26	5460
GCF	3.02	5401
GCF	3.77	6633
GCF	4.27	7031
GCF	4.77	7202
GCF	5.28	7324
GCF	5.78	10381
GCF	6.28	10981
GCF	6.78	10993
GCF	7.29	11085
GCF	7.79	19261
GCF	8.29	20671
GCF	8.79	20821
GCF	9.30	20858
GCF	9.80	38564
GCF	10.30	40920
GCF	10.80	41293
GCF	11.31	41452
GCF	11.81	71717
GCF	12.31	75463
GCF	12.81	76196
GCF	13.32	76395
GCF	13.82	117024
GCF	14.32	120664
GCF	14.82	123281
GCF	15.33	123900
GCF	15.83	174793
GCF	16.33	178856
GCF	16.83	182260
GCF	17.34	182785
GCF	17.84	233057
GCF	18.34	237180
GCF	18.84	240072
GCF	19.35	241204
GCF	19.85	286475
GCF	20.35	290761
GCF	20.85	293226
GCF	21.36	316097
GCF	21.86	324870
GCF	22.36	327891
GCF	22.86	328954
GCF	23.37	336376
GCF	23.87	341832
GCF	24.37	342877
GCF	24.87	343567
GCF	25.38	336408
GCF	25.88	338003
GCF	26.38	338139
GCF	26.88	337569
GCF	27.39	322199
GCF	27.89	318207
GCF	28.39	316309
GCF	28.89	316244
GCF	29.40	290339
GCF	29.90	281933
GCF	30.40	279017
GCF	30.90	278820
GCF	31.41	248651
GCF	31.91	239972
GCF	32.66	236894
GCF	33.42	205424
GCF	33.92	196428
GCF	34.42	196325
GCF	34.92	192676
GCF	35.43	163998
GCF	35.93	155409
GCF	36.43	155234
GCF	36.93	152091
GCF	37.44	127892
GCF	37.94	119325
GCF	38.44	118625
GCF	38.94	114904
GCF	39.45	92281
GCF	39.95	85133
GCF	40.45	84526
GCF	40.95	67696
GCF	41.46	65902
GCF	41.96	60715
GCF	42.46	60153
GCF	42.96	48129
GCF	43.47	47787
GCF	43.97	42793
GCF	44.47	42457
GCF	44.97	33920
GCF	45.48	33825
GCF	45.98	30151
GCF	46.48	30049
GCF	46.98	24182
GCF	47.49	24114
GCF	47.99	22062
GCF	48.49	22055
GCF	49.25	17593
GCF	50.25	15816
GCF	51.01	13074
GCF	51.51	13055
GCF	52.01	10784
GCF	52.51	10577
GCF	53.02	7469
GCF	53.52	7109
GCF	54.02	5944
GCF	54.52	5397
GCF	55.03	4045
GCF	55.53	3630
GCF	56.03	2877
GCF	56.53	2740
GCF	57.04	1964
GCF	57.54	1793
GCF	58.04	1497
GCF	58.54	1398
GCF	59.05	978
GCF	59.55	936
GCF	60.05	770
GCF	60.55	572
GCF	61.06	517
GCF	61.56	497
GCF	62.06	403
GCF	62.56	285
GCF	63.07	242
GCF	63.57	241
GCF	64.07	210
GCF	64.57	162
GCF	65.08	139
GCF	65.58	142
GCF	66.08	101
GCF	66.83	79
GCF	67.59	81
GCF	68.09	73
GCF	68.84	59
GCF	69.60	50
GCF	70.10	42
GCF	70.85	22
GCF	71.61	18
GCF	72.11	17
GCF	72.61	15
GCF	73.12	17
GCF	73.62	16
GCF	74.12	12
GCF	74.87	9
GCF	75.63	7
GCF	76.38	5
GCF	77.39	3
GCF	78.39	2
GCF	79.65	1
GCF	81.16	2
GCF	82.16	1
GCF	82.66	2
GCF	83.42	1
GCF	84.42	2
GCF	85.43	1
GCF	86.93	0
GCF	89.70	1
GCF	92.46	2
GCF	93.72	1
GCF	94.22	2
GCF	95.23	1
GCF	96.98	0
GCF	98.99	1
# GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part.
# ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
GCC	1	41.43	30.74	11.84	15.99	0.33	0.00
GCC	2	45.74	28.83	9.06	16.38	0.00	0.00
GCC	3	51.60	24.62	6.12	17.66	0.00	0.00
GCC	4	46.42	27.01	5.93	20.64	0.00	0.00
GCC	5	41.21	27.13	2.88	28.78	0.00	0.00
GCC	6	42.44	24.01	2.84	30.71	0.00	0.00
GCC	7	44.05	24.22	2.86	28.88	0.00	0.00
GCC	8	43.96	23.09	2.95	30.00	0.00	0.00
GCC	9	43.81	23.82	3.07	29.30	0.00	0.00
GCC	10	43.06	24.32	3.14	29.48	0.00	0.00
GCC	11	43.21	24.09	3.33	29.37	0.08	0.00
GCC	12	43.35	23.95	3.32	29.38	0.00	0.00
GCC	13	43.31	24.11	3.33	29.26	0.00	0.00
GCC	14	43.65	24.32	3.34	28.69	0.00	0.00
GCC	15	43.38	24.08	3.35	29.19	0.00	0.00
GCC	16	43.12	23.93	3.24	29.71	0.00	0.00
GCC	17	42.68	23.87	3.23	30.22	0.00	0.00
GCC	18	43.11	23.27	3.26	30.37	0.00	0.00
GCC	19	42.98	23.63	3.28	30.11	0.00	0.00
GCC	20	44.25	22.85	3.30	29.60	0.00	0.00
GCC	21	44.66	22.64	3.35	29.35	0.00	0.00
GCC	22	44.74	22.51	3.34	29.41	0.00	0.00
GCC	23	44.32	22.76	3.32	29.61	0.00	0.00
GCC	24	44.23	22.47	3.39	29.91	0.00	0.00
GCC	25	44.32	22.67	3.32	29.70	0.00	0.00
GCC	26	44.18	22.51	3.38	29.93	0.00	0.00
GCC	27	44.08	22.44	3.36	30.12	0.00	0.00
GCC	28	44.52	22.14	3.24	30.11	0.00	0.00
GCC	29	44.67	22.18	3.17	29.99	0.00	0.00
GCC	30	45.41	21.25	3.15	30.20	0.00	0.00
GCC	31	45.57	21.13	3.26	30.05	0.00	0.00
GCC	32	46.00	21.02	3.20	29.77	0.00	0.00
GCC	33	46.48	20.89	3.22	29.41	0.00	0.00
GCC	34	46.43	20.84	3.22	29.51	0.00	0.00
GCC	35	46.34	21.00	3.24	29.42	0.00	0.00
GCC	36	46.75	20.60	3.21	29.44	0.00	0.00
GCC	37	46.79	20.68	3.31	29.22	0.00	0.00
GCC	38	46.47	20.70	3.17	29.66	0.00	0.00
GCC	39	46.89	20.66	3.22	29.22	0.00	0.00
GCC	40	46.81	20.47	3.19	29.53	0.00	0.00
GCC	41	46.93	20.51	3.32	29.25	0.00	0.00
GCC	42	46.81	20.38	3.25	29.56	0.00	0.00
GCC	43	46.91	20.47	3.35	29.27	0.00	0.00
GCC	44	47.00	20.54	3.23	29.23	0.00	0.00
GCC	45	46.97	20.38	3.25	29.41	0.00	0.00
GCC	46	47.45	20.30	3.21	29.04	0.00	0.00
GCC	47	47.26	20.43	3.25	29.06	0.00	0.00
GCC	48	47.78	20.05	3.28	28.89	0.00	0.00
GCC	49	48.82	18.17	3.30	29.71	4.96	0.00
GCC	50	52.70	15.34	3.15	28.81	0.00	0.00
GCC	51	63.17	1.71	3.54	31.57	0.00	0.00
# ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
# ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%]
LBC	1	41.43	30.74	11.84	15.99	0.33	0.00
LBC	2	45.74	28.83	9.06	16.38	0.00	0.00
LBC	3	51.60	24.62	6.12	17.66	0.00	0.00
LBC	4	46.42	27.01	5.93	20.64	0.00	0.00
LBC	5	41.21	27.13	2.88	28.78	0.00	0.00
LBC	6	42.44	24.01	2.84	30.71	0.00	0.00
LBC	7	44.05	24.22	2.86	28.88	0.00	0.00
LBC	8	43.96	23.09	2.95	30.00	0.00	0.00
LBC	9	43.81	23.82	3.07	29.30	0.00	0.00
LBC	10	43.06	24.32	3.14	29.48	0.00	0.00
LBC	11	43.21	24.09	3.33	29.37	0.08	0.00
LBC	12	43.35	23.95	3.32	29.38	0.00	0.00
LBC	13	43.31	24.11	3.33	29.26	0.00	0.00
LBC	14	43.65	24.32	3.34	28.69	0.00	0.00
LBC	15	43.38	24.08	3.35	29.19	0.00	0.00
LBC	16	43.12	23.93	3.24	29.71	0.00	0.00
LBC	17	42.68	23.87	3.23	30.22	0.00	0.00
LBC	18	43.11	23.27	3.26	30.37	0.00	0.00
LBC	19	42.98	23.63	3.28	30.11	0.00	0.00
LBC	20	44.25	22.85	3.30	29.60	0.00	0.00
LBC	21	44.66	22.64	3.35	29.35	0.00	0.00
LBC	22	44.74	22.51	3.34	29.41	0.00	0.00
LBC	23	44.32	22.76	3.32	29.61	0.00	0.00
LBC	24	44.23	22.47	3.39	29.91	0.00	0.00
LBC	25	44.32	22.67	3.32	29.70	0.00	0.00
LBC	26	44.18	22.51	3.38	29.93	0.00	0.00
LBC	27	44.08	22.44	3.36	30.12	0.00	0.00
LBC	28	44.52	22.14	3.24	30.11	0.00	0.00
LBC	29	44.67	22.18	3.17	29.99	0.00	0.00
LBC	30	45.41	21.25	3.15	30.20	0.00	0.00
LBC	31	45.57	21.13	3.26	30.05	0.00	0.00
LBC	32	46.00	21.02	3.20	29.77	0.00	0.00
LBC	33	46.48	20.89	3.22	29.41	0.00	0.00
LBC	34	46.43	20.84	3.22	29.51	0.00	0.00
LBC	35	46.34	21.00	3.24	29.42	0.00	0.00
LBC	36	46.75	20.60	3.21	29.44	0.00	0.00
LBC	37	46.79	20.68	3.31	29.22	0.00	0.00
LBC	38	46.47	20.70	3.17	29.66	0.00	0.00
LBC	39	46.89	20.66	3.22	29.22	0.00	0.00
LBC	40	46.81	20.47	3.19	29.53	0.00	0.00
LBC	41	46.93	20.51	3.32	29.25	0.00	0.00
LBC	42	46.81	20.38	3.25	29.56	0.00	0.00
LBC	43	46.91	20.47	3.35	29.27	0.00	0.00
LBC	44	47.00	20.54	3.23	29.23	0.00	0.00
LBC	45	46.97	20.38	3.25	29.41	0.00	0.00
LBC	46	47.45	20.30	3.21	29.04	0.00	0.00
LBC	47	47.26	20.43	3.25	29.06	0.00	0.00
LBC	48	47.78	20.05	3.28	28.89	0.00	0.00
LBC	49	48.82	18.17	3.30	29.71	4.96	0.00
LBC	50	52.70	15.34	3.15	28.81	0.00	0.00
LBC	51	63.17	1.71	3.54	31.57	0.00	0.00
# Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs
# Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count
RL	36	4360
RL	37	4733
RL	38	4982
RL	39	5467
RL	40	5920
RL	41	6707
RL	42	7284
RL	43	8227
RL	44	10590
RL	45	15944
RL	46	30572
RL	47	46909
RL	48	148241
RL	49	256276
RL	50	730291
RL	51	2258603
# Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count
# Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count
# Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions
ID	1	16114	28738
ID	2	3698	6929
ID	3	903	1379
# Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev)
IC	2	0	14	0	10
IC	3	0	48	0	43
IC	4	0	62	0	58
IC	5	0	99	0	135
IC	6	0	171	0	163
IC	7	0	144	0	158
IC	8	0	131	0	192
IC	9	0	173	0	109
IC	10	0	99	0	152
IC	11	0	119	0	131
IC	12	0	162	0	154
IC	13	0	135	0	164
IC	14	0	129	0	152
IC	15	0	116	0	219
IC	16	0	136	0	169
IC	17	0	104	0	133
IC	18	0	111	0	183
IC	19	0	88	0	171
IC	20	0	81	0	119
IC	21	0	60	0	140
IC	22	0	30	0	53
IC	23	0	23	0	27
IC	24	0	31	0	42
IC	25	0	56	0	40
IC	26	0	34	0	49
IC	27	0	38	0	92
IC	28	0	78	0	162
IC	29	0	111	0	300
IC	30	0	243	0	1968
IC	31	0	975	0	2065
IC	32	0	1071	0	1993
IC	33	0	1142	0	2130
IC	34	0	1128	0	2104
IC	35	0	1018	0	2140
IC	36	0	1080	0	2034
IC	37	0	1111	0	2158
IC	38	0	1118	0	2117
IC	39	0	1058	0	2042
IC	40	0	1097	0	2083
IC	41	0	1171	0	1912
IC	42	0	1060	0	1923
IC	43	0	1124	0	1866
IC	44	0	1175	0	1764
IC	45	0	1046	0	1458
IC	46	0	805	0	1177
IC	47	0	404	0	437
IC	48	0	180	0	126
IC	49	0	118	0	29
IC	50	0	8	0	0
# Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part.
COV	[1-1]	1	38555852
COV	[2-2]	2	12067363
COV	[3-3]	3	5377758
COV	[4-4]	4	2855060
COV	[5-5]	5	1688860
COV	[6-6]	6	1091295
COV	[7-7]	7	750360
COV	[8-8]	8	532513
COV	[9-9]	9	391839
COV	[10-10]	10	305119
COV	[11-11]	11	240837
COV	[12-12]	12	193796
COV	[13-13]	13	157649
COV	[14-14]	14	135231
COV	[15-15]	15	111234
COV	[16-16]	16	97671
COV	[17-17]	17	83748
COV	[18-18]	18	71480
COV	[19-19]	19	67175
COV	[20-20]	20	59177
COV	[21-21]	21	50433
COV	[22-22]	22	46394
COV	[23-23]	23	41599
COV	[24-24]	24	37805
COV	[25-25]	25	33837
COV	[26-26]	26	30257
COV	[27-27]	27	29229
COV	[28-28]	28	25295
COV	[29-29]	29	23612
COV	[30-30]	30	22515
COV	[31-31]	31	20874
COV	[32-32]	32	19126
COV	[33-33]	33	18792
COV	[34-34]	34	16486
COV	[35-35]	35	14593
COV	[36-36]	36	14716
COV	[37-37]	37	12444
COV	[38-38]	38	12630
COV	[39-39]	39	11351
COV	[40-40]	40	10107
COV	[41-41]	41	10492
COV	[42-42]	42	8813
COV	[43-43]	43	9066
COV	[44-44]	44	8387
COV	[45-45]	45	8209
COV	[46-46]	46	7633
COV	[47-47]	47	7489
COV	[48-48]	48	6909
COV	[49-49]	49	6533
COV	[50-50]	50	6452
COV	[51-51]	51	5927
COV	[52-52]	52	5630
COV	[53-53]	53	5024
COV	[54-54]	54	4998
COV	[55-55]	55	5135
COV	[56-56]	56	4787
COV	[57-57]	57	3877
COV	[58-58]	58	4638
COV	[59-59]	59	3932
COV	[60-60]	60	4165
COV	[61-61]	61	3694
COV	[62-62]	62	3611
COV	[63-63]	63	3341
COV	[64-64]	64	3239
COV	[65-65]	65	3401
COV	[66-66]	66	3195
COV	[67-67]	67	2906
COV	[68-68]	68	2843
COV	[69-69]	69	2566
COV	[70-70]	70	2712
COV	[71-71]	71	2121
COV	[72-72]	72	2376
COV	[73-73]	73	2614
COV	[74-74]	74	2402
COV	[75-75]	75	2246
COV	[76-76]	76	2051
COV	[77-77]	77	2069
COV	[78-78]	78	1981
COV	[79-79]	79	2058
COV	[80-80]	80	1955
COV	[81-81]	81	1849
COV	[82-82]	82	1729
COV	[83-83]	83	1954
COV	[84-84]	84	1801
COV	[85-85]	85	1514
COV	[86-86]	86	1674
COV	[87-87]	87	1637
COV	[88-88]	88	1603
COV	[89-89]	89	1362
COV	[90-90]	90	1439
COV	[91-91]	91	1317
COV	[92-92]	92	1571
COV	[93-93]	93	1463
COV	[94-94]	94	1098
COV	[95-95]	95	1354
COV	[96-96]	96	1005
COV	[97-97]	97	1318
COV	[98-98]	98	1164
COV	[99-99]	99	1118
COV	[100-100]	100	974
COV	[101-101]	101	821
COV	[102-102]	102	891
COV	[103-103]	103	849
COV	[104-104]	104	917
COV	[105-105]	105	859
COV	[106-106]	106	795
COV	[107-107]	107	983
COV	[108-108]	108	923
COV	[109-109]	109	769
COV	[110-110]	110	764
COV	[111-111]	111	860
COV	[112-112]	112	911
COV	[113-113]	113	964
COV	[114-114]	114	703
COV	[115-115]	115	746
COV	[116-116]	116	790
COV	[117-117]	117	733
COV	[118-118]	118	572
COV	[119-119]	119	763
COV	[120-120]	120	642
COV	[121-121]	121	660
COV	[122-122]	122	570
COV	[123-123]	123	679
COV	[124-124]	124	628
COV	[125-125]	125	608
COV	[126-126]	126	613
COV	[127-127]	127	585
COV	[128-128]	128	645
COV	[129-129]	129	478
COV	[130-130]	130	589
COV	[131-131]	131	515
COV	[132-132]	132	536
COV	[133-133]	133	452
COV	[134-134]	134	530
COV	[135-135]	135	481
COV	[136-136]	136	689
COV	[137-137]	137	464
COV	[138-138]	138	521
COV	[139-139]	139	645
COV	[140-140]	140	435
COV	[141-141]	141	476
COV	[142-142]	142	532
COV	[143-143]	143	317
COV	[144-144]	144	340
COV	[145-145]	145	429
COV	[146-146]	146	483
COV	[147-147]	147	369
COV	[148-148]	148	256
COV	[149-149]	149	374
COV	[150-150]	150	300
COV	[151-151]	151	389
COV	[152-152]	152	510
COV	[153-153]	153	395
COV	[154-154]	154	421
COV	[155-155]	155	351
COV	[156-156]	156	293
COV	[157-157]	157	280
COV	[158-158]	158	295
COV	[159-159]	159	214
COV	[160-160]	160	298
COV	[161-161]	161	293
COV	[162-162]	162	230
COV	[163-163]	163	288
COV	[164-164]	164	258
COV	[165-165]	165	321
COV	[166-166]	166	349
COV	[167-167]	167	248
COV	[168-168]	168	234
COV	[169-169]	169	312
COV	[170-170]	170	249
COV	[171-171]	171	183
COV	[172-172]	172	321
COV	[173-173]	173	325
COV	[174-174]	174	285
COV	[175-175]	175	189
COV	[176-176]	176	210
COV	[177-177]	177	115
COV	[178-178]	178	201
COV	[179-179]	179	229
COV	[180-180]	180	282
COV	[181-181]	181	194
COV	[182-182]	182	218
COV	[183-183]	183	196
COV	[184-184]	184	168
COV	[185-185]	185	215
COV	[186-186]	186	197
COV	[187-187]	187	286
COV	[188-188]	188	112
COV	[189-189]	189	144
COV	[190-190]	190	97
COV	[191-191]	191	153
COV	[192-192]	192	93
COV	[193-193]	193	134
COV	[194-194]	194	143
COV	[195-195]	195	161
COV	[196-196]	196	163
COV	[197-197]	197	192
COV	[198-198]	198	184
COV	[199-199]	199	237
COV	[200-200]	200	132
COV	[201-201]	201	153
COV	[202-202]	202	66
COV	[203-203]	203	91
COV	[204-204]	204	133
COV	[205-205]	205	89
COV	[206-206]	206	166
COV	[207-207]	207	76
COV	[208-208]	208	116
COV	[209-209]	209	170
COV	[210-210]	210	116
COV	[211-211]	211	146
COV	[212-212]	212	169
COV	[213-213]	213	177
COV	[214-214]	214	188
COV	[215-215]	215	129
COV	[216-216]	216	245
COV	[217-217]	217	187
COV	[218-218]	218	143
COV	[219-219]	219	136
COV	[220-220]	220	141
COV	[221-221]	221	134
COV	[222-222]	222	167
COV	[223-223]	223	116
COV	[224-224]	224	80
COV	[225-225]	225	119
COV	[226-226]	226	80
COV	[227-227]	227	97
COV	[228-228]	228	104
COV	[229-229]	229	102
COV	[230-230]	230	161
COV	[231-231]	231	66
COV	[232-232]	232	106
COV	[233-233]	233	166
COV	[234-234]	234	124
COV	[235-235]	235	105
COV	[236-236]	236	72
COV	[237-237]	237	71
COV	[238-238]	238	79
COV	[239-239]	239	68
COV	[240-240]	240	139
COV	[241-241]	241	118
COV	[242-242]	242	122
COV	[243-243]	243	135
COV	[244-244]	244	129
COV	[245-245]	245	75
COV	[246-246]	246	67
COV	[247-247]	247	44
COV	[248-248]	248	60
COV	[249-249]	249	58
COV	[250-250]	250	91
COV	[251-251]	251	68
COV	[252-252]	252	67
COV	[253-253]	253	100
COV	[254-254]	254	79
COV	[255-255]	255	86
COV	[256-256]	256	120
COV	[257-257]	257	55
COV	[258-258]	258	76
COV	[259-259]	259	88
COV	[260-260]	260	79
COV	[261-261]	261	73
COV	[262-262]	262	76
COV	[263-263]	263	80
COV	[264-264]	264	59
COV	[265-265]	265	95
COV	[266-266]	266	82
COV	[267-267]	267	33
COV	[268-268]	268	64
COV	[269-269]	269	53
COV	[270-270]	270	139
COV	[271-271]	271	64
COV	[272-272]	272	37
COV	[273-273]	273	47
COV	[274-274]	274	27
COV	[275-275]	275	47
COV	[276-276]	276	94
COV	[277-277]	277	65
COV	[278-278]	278	104
COV	[279-279]	279	114
COV	[280-280]	280	109
COV	[281-281]	281	79
COV	[282-282]	282	81
COV	[283-283]	283	61
COV	[284-284]	284	69
COV	[285-285]	285	94
COV	[286-286]	286	49
COV	[287-287]	287	94
COV	[288-288]	288	126
COV	[289-289]	289	28
COV	[290-290]	290	53
COV	[291-291]	291	55
COV	[292-292]	292	29
COV	[293-293]	293	80
COV	[294-294]	294	28
COV	[295-295]	295	52
COV	[296-296]	296	35
COV	[297-297]	297	88
COV	[298-298]	298	56
COV	[299-299]	299	51
COV	[300-300]	300	54
COV	[301-301]	301	34
COV	[302-302]	302	20
COV	[303-303]	303	99
COV	[304-304]	304	19
COV	[305-305]	305	46
COV	[306-306]	306	29
COV	[307-307]	307	62
COV	[308-308]	308	66
COV	[309-309]	309	39
COV	[310-310]	310	42
COV	[311-311]	311	75
COV	[312-312]	312	70
COV	[313-313]	313	29
COV	[314-314]	314	52
COV	[315-315]	315	33
COV	[316-316]	316	48
COV	[317-317]	317	57
COV	[318-318]	318	33
COV	[319-319]	319	20
COV	[320-320]	320	15
COV	[321-321]	321	8
COV	[322-322]	322	63
COV	[323-323]	323	29
COV	[324-324]	324	27
COV	[325-325]	325	81
COV	[326-326]	326	16
COV	[327-327]	327	24
COV	[328-328]	328	20
COV	[329-329]	329	22
COV	[330-330]	330	67
COV	[331-331]	331	59
COV	[332-332]	332	21
COV	[333-333]	333	55
COV	[334-334]	334	40
COV	[335-335]	335	38
COV	[336-336]	336	40
COV	[337-337]	337	22
COV	[338-338]	338	25
COV	[339-339]	339	15
COV	[340-340]	340	37
COV	[341-341]	341	96
COV	[342-342]	342	13
COV	[343-343]	343	23
COV	[344-344]	344	25
COV	[345-345]	345	78
COV	[346-346]	346	8
COV	[347-347]	347	18
COV	[348-348]	348	9
COV	[349-349]	349	21
COV	[350-350]	350	52
COV	[351-351]	351	28
COV	[352-352]	352	32
COV	[353-353]	353	60
COV	[354-354]	354	52
COV	[355-355]	355	29
COV	[356-356]	356	12
COV	[357-357]	357	57
COV	[358-358]	358	17
COV	[359-359]	359	22
COV	[360-360]	360	30
COV	[361-361]	361	50
COV	[362-362]	362	21
COV	[363-363]	363	18
COV	[364-364]	364	47
COV	[365-365]	365	26
COV	[366-366]	366	21
COV	[367-367]	367	43
COV	[368-368]	368	19
COV	[369-369]	369	8
COV	[370-370]	370	11
COV	[371-371]	371	15
COV	[372-372]	372	17
COV	[373-373]	373	41
COV	[374-374]	374	38
COV	[375-375]	375	47
COV	[376-376]	376	17
COV	[377-377]	377	21
COV	[378-378]	378	20
COV	[379-379]	379	29
COV	[380-380]	380	20
COV	[381-381]	381	63
COV	[382-382]	382	15
COV	[383-383]	383	11
COV	[384-384]	384	8
COV	[385-385]	385	53
COV	[386-386]	386	21
COV	[387-387]	387	20
COV	[388-388]	388	30
COV	[389-389]	389	20
COV	[390-390]	390	7
COV	[391-391]	391	9
COV	[392-392]	392	13
COV	[393-393]	393	10
COV	[394-394]	394	23
COV	[395-395]	395	16
COV	[396-396]	396	20
COV	[397-397]	397	28
COV	[398-398]	398	17
COV	[399-399]	399	34
COV	[400-400]	400	44
COV	[401-401]	401	22
COV	[402-402]	402	24
COV	[403-403]	403	14
COV	[404-404]	404	64
COV	[405-405]	405	11
COV	[406-406]	406	14
COV	[407-407]	407	20
COV	[408-408]	408	13
COV	[409-409]	409	44
COV	[410-410]	410	24
COV	[411-411]	411	21
COV	[412-412]	412	11
COV	[413-413]	413	30
COV	[414-414]	414	14
COV	[415-415]	415	23
COV	[416-416]	416	29
COV	[417-417]	417	31
COV	[418-418]	418	1
COV	[419-419]	419	6
COV	[420-420]	420	6
COV	[421-421]	421	6
COV	[422-422]	422	2
COV	[423-423]	423	6
COV	[424-424]	424	2
COV	[425-425]	425	15
COV	[426-426]	426	5
COV	[427-427]	427	40
COV	[428-428]	428	13
COV	[429-429]	429	3
COV	[430-430]	430	8
COV	[431-431]	431	5
COV	[432-432]	432	16
COV	[433-433]	433	9
COV	[434-434]	434	17
COV	[435-435]	435	8
COV	[436-436]	436	7
COV	[437-437]	437	3
COV	[438-438]	438	6
COV	[439-439]	439	22
COV	[440-440]	440	9
COV	[441-441]	441	10
COV	[442-442]	442	6
COV	[443-443]	443	21
COV	[444-444]	444	16
COV	[445-445]	445	12
COV	[446-446]	446	10
COV	[447-447]	447	20
COV	[448-448]	448	31
COV	[449-449]	449	17
COV	[450-450]	450	7
COV	[451-451]	451	10
COV	[452-452]	452	8
COV	[453-453]	453	35
COV	[454-454]	454	35
COV	[455-455]	455	13
COV	[456-456]	456	19
COV	[457-457]	457	10
COV	[458-458]	458	6
COV	[459-459]	459	7
COV	[460-460]	460	4
COV	[461-461]	461	5
COV	[462-462]	462	5
COV	[463-463]	463	4
COV	[464-464]	464	5
COV	[465-465]	465	13
COV	[466-466]	466	6
COV	[467-467]	467	4
COV	[468-468]	468	6
COV	[469-469]	469	10
COV	[470-470]	470	10
COV	[471-471]	471	28
COV	[472-472]	472	6
COV	[473-473]	473	8
COV	[474-474]	474	5
COV	[475-475]	475	29
COV	[476-476]	476	26
COV	[477-477]	477	41
COV	[478-478]	478	23
COV	[479-479]	479	7
COV	[480-480]	480	25
COV	[481-481]	481	20
COV	[482-482]	482	4
COV	[483-483]	483	2
COV	[484-484]	484	20
COV	[485-485]	485	8
COV	[486-486]	486	6
COV	[487-487]	487	13
COV	[488-488]	488	5
COV	[489-489]	489	6
COV	[490-490]	490	5
COV	[491-491]	491	8
COV	[492-492]	492	3
COV	[493-493]	493	35
COV	[494-494]	494	39
COV	[495-495]	495	4
COV	[496-496]	496	6
COV	[497-497]	497	41
COV	[498-498]	498	6
COV	[499-499]	499	5
COV	[500-500]	500	10
COV	[501-501]	501	5
COV	[502-502]	502	39
COV	[503-503]	503	7
COV	[504-504]	504	4
COV	[505-505]	505	1
COV	[506-506]	506	9
COV	[507-507]	507	11
COV	[508-508]	508	7
COV	[509-509]	509	2
COV	[510-510]	510	1
COV	[511-511]	511	2
COV	[512-512]	512	2
COV	[513-513]	513	1
COV	[514-514]	514	3
COV	[515-515]	515	7
COV	[516-516]	516	11
COV	[517-517]	517	11
COV	[518-518]	518	9
COV	[519-519]	519	2
COV	[520-520]	520	1
COV	[521-521]	521	2
COV	[524-524]	524	1
COV	[525-525]	525	1
COV	[528-528]	528	5
COV	[529-529]	529	4
COV	[530-530]	530	4
COV	[531-531]	531	2
COV	[532-532]	532	3
COV	[533-533]	533	1
COV	[534-534]	534	2
COV	[535-535]	535	4
COV	[536-536]	536	3
COV	[537-537]	537	2
COV	[538-538]	538	2
COV	[539-539]	539	2
COV	[540-540]	540	3
COV	[541-541]	541	2
COV	[542-542]	542	1
COV	[543-543]	543	2
COV	[544-544]	544	1
COV	[546-546]	546	37
COV	[547-547]	547	2
COV	[548-548]	548	3
COV	[549-549]	549	2
COV	[550-550]	550	4
COV	[551-551]	551	3
COV	[552-552]	552	2
COV	[553-553]	553	2
COV	[555-555]	555	1
COV	[556-556]	556	1
COV	[557-557]	557	2
COV	[558-558]	558	4
COV	[559-559]	559	2
COV	[560-560]	560	2
COV	[561-561]	561	7
COV	[562-562]	562	2
COV	[563-563]	563	27
COV	[564-564]	564	25
COV	[565-565]	565	3
COV	[567-567]	567	4
COV	[568-568]	568	4
COV	[569-569]	569	6
COV	[570-570]	570	10
COV	[571-571]	571	7
COV	[572-572]	572	4
COV	[573-573]	573	4
COV	[574-574]	574	2
COV	[575-575]	575	1
COV	[576-576]	576	3
COV	[577-577]	577	6
COV	[579-579]	579	7
COV	[580-580]	580	2
COV	[581-581]	581	2
COV	[582-582]	582	5
COV	[583-583]	583	4
COV	[584-584]	584	3
COV	[585-585]	585	2
COV	[586-586]	586	2
COV	[587-587]	587	3
COV	[588-588]	588	4
COV	[589-589]	589	6
COV	[590-590]	590	7
COV	[591-591]	591	5
COV	[592-592]	592	15
COV	[593-593]	593	16
COV	[594-594]	594	12
COV	[595-595]	595	22
COV	[596-596]	596	5
COV	[597-597]	597	3
COV	[598-598]	598	16
COV	[599-599]	599	7
COV	[600-600]	600	5
COV	[602-602]	602	2
COV	[603-603]	603	2
COV	[604-604]	604	1
COV	[605-605]	605	13
COV	[606-606]	606	11
COV	[608-608]	608	1
COV	[610-610]	610	2
COV	[611-611]	611	2
COV	[613-613]	613	4
COV	[614-614]	614	4
COV	[615-615]	615	3
COV	[616-616]	616	10
COV	[617-617]	617	12
COV	[618-618]	618	30
COV	[619-619]	619	3
COV	[620-620]	620	2
COV	[621-621]	621	4
COV	[622-622]	622	2
COV	[623-623]	623	3
COV	[624-624]	624	1
COV	[625-625]	625	3
COV	[626-626]	626	4
COV	[628-628]	628	5
COV	[629-629]	629	4
COV	[630-630]	630	3
COV	[631-631]	631	3
COV	[632-632]	632	6
COV	[633-633]	633	8
COV	[634-634]	634	23
COV	[635-635]	635	5
COV	[636-636]	636	6
COV	[637-637]	637	2
COV	[638-638]	638	1
COV	[639-639]	639	1
COV	[640-640]	640	2
COV	[642-642]	642	3
COV	[643-643]	643	2
COV	[644-644]	644	1
COV	[645-645]	645	3
COV	[646-646]	646	1
COV	[647-647]	647	1
COV	[648-648]	648	1
COV	[649-649]	649	2
COV	[650-650]	650	2
COV	[651-651]	651	2
COV	[652-652]	652	1
COV	[654-654]	654	3
COV	[655-655]	655	3
COV	[656-656]	656	33
COV	[657-657]	657	1
COV	[658-658]	658	5
COV	[659-659]	659	1
COV	[660-660]	660	2
COV	[661-661]	661	3
COV	[662-662]	662	5
COV	[663-663]	663	4
COV	[664-664]	664	3
COV	[665-665]	665	2
COV	[666-666]	666	4
COV	[667-667]	667	4
COV	[668-668]	668	3
COV	[669-669]	669	3
COV	[670-670]	670	2
COV	[671-671]	671	3
COV	[672-672]	672	1
COV	[673-673]	673	4
COV	[674-674]	674	3
COV	[675-675]	675	3
COV	[676-676]	676	1
COV	[679-679]	679	1
COV	[680-680]	680	4
COV	[681-681]	681	1
COV	[682-682]	682	5
COV	[683-683]	683	1
COV	[687-687]	687	1
COV	[691-691]	691	1
COV	[699-699]	699	2
COV	[700-700]	700	1
COV	[702-702]	702	8
COV	[703-703]	703	2
COV	[704-704]	704	4
COV	[705-705]	705	1
COV	[706-706]	706	7
COV	[708-708]	708	2
COV	[709-709]	709	2
COV	[710-710]	710	3
COV	[711-711]	711	1
COV	[712-712]	712	1
COV	[713-713]	713	2
COV	[714-714]	714	1
COV	[715-715]	715	1
COV	[716-716]	716	2
COV	[718-718]	718	3
COV	[719-719]	719	3
COV	[720-720]	720	1
COV	[721-721]	721	4
COV	[722-722]	722	1
COV	[723-723]	723	40
COV	[724-724]	724	3
COV	[725-725]	725	5
COV	[726-726]	726	2
COV	[727-727]	727	5
COV	[728-728]	728	28
COV	[729-729]	729	1
COV	[732-732]	732	1
COV	[733-733]	733	1
COV	[734-734]	734	3
COV	[735-735]	735	1
COV	[736-736]	736	1
COV	[737-737]	737	1
COV	[738-738]	738	1
COV	[742-742]	742	1
COV	[744-744]	744	2
COV	[745-745]	745	2
COV	[746-746]	746	3
COV	[747-747]	747	2
COV	[749-749]	749	1
COV	[750-750]	750	1
COV	[751-751]	751	1
COV	[752-752]	752	2
COV	[753-753]	753	4
COV	[754-754]	754	1
COV	[757-757]	757	1
COV	[758-758]	758	2
COV	[760-760]	760	2
COV	[761-761]	761	1
COV	[763-763]	763	1
COV	[766-766]	766	1
COV	[767-767]	767	1
COV	[768-768]	768	3
COV	[769-769]	769	2
COV	[771-771]	771	1
COV	[772-772]	772	2
COV	[774-774]	774	4
COV	[775-775]	775	1
COV	[776-776]	776	2
COV	[777-777]	777	2
COV	[779-779]	779	2
COV	[781-781]	781	1
COV	[782-782]	782	1
COV	[783-783]	783	11
COV	[784-784]	784	21
COV	[785-785]	785	2
COV	[786-786]	786	1
COV	[793-793]	793	1
COV	[794-794]	794	1
COV	[798-798]	798	2
COV	[799-799]	799	1
COV	[800-800]	800	1
COV	[801-801]	801	1
COV	[802-802]	802	1
COV	[803-803]	803	1
COV	[804-804]	804	1
COV	[807-807]	807	1
COV	[808-808]	808	1
COV	[809-809]	809	2
COV	[811-811]	811	3
COV	[818-818]	818	1
COV	[820-820]	820	1
COV	[821-821]	821	2
COV	[822-822]	822	1
COV	[824-824]	824	1
COV	[825-825]	825	1
COV	[826-826]	826	15
COV	[827-827]	827	25
COV	[828-828]	828	3
COV	[830-830]	830	7
COV	[831-831]	831	1
COV	[832-832]	832	7
COV	[834-834]	834	2
COV	[835-835]	835	1
COV	[836-836]	836	10
COV	[837-837]	837	2
COV	[838-838]	838	63
COV	[839-839]	839	1
COV	[840-840]	840	1
COV	[843-843]	843	1
COV	[846-846]	846	2
COV	[847-847]	847	1
COV	[851-851]	851	1
COV	[856-856]	856	15
COV	[857-857]	857	35
COV	[860-860]	860	4
COV	[861-861]	861	3
COV	[862-862]	862	2
COV	[864-864]	864	1
COV	[865-865]	865	1
COV	[869-869]	869	1
COV	[870-870]	870	1
COV	[873-873]	873	8
COV	[875-875]	875	1
COV	[876-876]	876	2
COV	[878-878]	878	2
COV	[880-880]	880	1
COV	[882-882]	882	1
COV	[883-883]	883	1
COV	[884-884]	884	2
COV	[886-886]	886	1
COV	[887-887]	887	6
COV	[888-888]	888	10
COV	[890-890]	890	1
COV	[891-891]	891	2
COV	[898-898]	898	2
COV	[899-899]	899	4
COV	[900-900]	900	1
COV	[901-901]	901	1
COV	[903-903]	903	1
COV	[904-904]	904	1
COV	[905-905]	905	2
COV	[908-908]	908	4
COV	[910-910]	910	1
COV	[913-913]	913	1
COV	[914-914]	914	2
COV	[917-917]	917	1
COV	[919-919]	919	5
COV	[920-920]	920	1
COV	[922-922]	922	1
COV	[923-923]	923	2
COV	[924-924]	924	1
COV	[925-925]	925	3
COV	[926-926]	926	1
COV	[927-927]	927	1
COV	[928-928]	928	2
COV	[929-929]	929	2
COV	[931-931]	931	2
COV	[932-932]	932	1
COV	[933-933]	933	1
COV	[934-934]	934	1
COV	[941-941]	941	1
COV	[942-942]	942	2
COV	[945-945]	945	1
COV	[954-954]	954	2
COV	[965-965]	965	1
COV	[968-968]	968	1
COV	[975-975]	975	1
COV	[976-976]	976	1
COV	[978-978]	978	1
COV	[982-982]	982	1
COV	[983-983]	983	2
COV	[984-984]	984	3
COV	[990-990]	990	1
COV	[993-993]	993	1
COV	[994-994]	994	4
COV	[995-995]	995	5
COV	[996-996]	996	12
COV	[1000<]	1000	320
# GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile
GCD	0.0	0.006	0.000	0.000	0.000	0.005	0.005
GCD	1.0	0.008	16.955	16.955	16.955	16.955	16.955
GCD	2.0	0.013	0.002	0.002	0.183	0.507	0.507
GCD	3.0	0.021	0.002	0.002	0.002	0.020	0.650
GCD	4.0	0.030	0.002	0.002	0.320	0.887	2.453
GCD	5.0	0.038	0.002	0.002	0.002	0.007	0.052
GCD	5.8	0.039	0.062	0.062	0.062	0.062	0.062
GCD	6.0	0.062	0.002	0.060	0.127	0.635	0.697
GCD	7.0	0.084	0.002	0.010	0.070	0.545	1.477
GCD	8.0	0.122	0.002	0.002	0.015	0.068	0.220
GCD	9.0	0.152	0.005	0.035	0.072	0.140	0.268
GCD	10.0	0.208	0.002	0.007	0.040	0.083	0.260
GCD	11.0	0.270	0.007	0.013	0.068	0.168	0.370
GCD	12.0	0.351	0.002	0.002	0.018	0.070	0.168
GCD	13.0	0.488	0.005	0.010	0.023	0.043	0.125
GCD	14.0	0.670	0.002	0.007	0.020	0.047	0.127
GCD	15.0	0.884	0.007	0.013	0.023	0.047	0.093
GCD	16.0	1.287	0.005	0.013	0.027	0.052	0.123
GCD	17.0	1.876	0.007	0.015	0.030	0.062	0.135
GCD	18.0	3.006	0.010	0.018	0.032	0.078	0.170
GCD	19.0	4.849	0.013	0.023	0.043	0.087	0.177
GCD	20.0	8.022	0.013	0.023	0.047	0.093	0.200
GCD	21.0	12.952	0.018	0.030	0.060	0.120	0.228
GCD	22.0	20.677	0.020	0.038	0.072	0.145	0.270
GCD	23.0	31.144	0.025	0.045	0.090	0.177	0.310
GCD	24.0	43.733	0.025	0.052	0.105	0.203	0.345
GCD	25.0	56.261	0.030	0.060	0.117	0.233	0.398
GCD	26.0	67.993	0.030	0.062	0.127	0.245	0.423
GCD	27.0	77.383	0.030	0.060	0.127	0.248	0.433
GCD	28.0	84.500	0.030	0.058	0.125	0.252	0.460
GCD	29.0	89.261	0.030	0.055	0.117	0.240	0.423
GCD	30.0	92.513	0.027	0.058	0.117	0.240	0.458
GCD	31.0	94.945	0.025	0.052	0.117	0.250	0.472
GCD	32.0	96.497	0.023	0.047	0.105	0.215	0.445
GCD	33.0	97.525	0.015	0.038	0.095	0.220	0.415
GCD	34.0	98.296	0.018	0.052	0.108	0.235	0.510
GCD	35.0	98.850	0.013	0.032	0.083	0.192	0.417
GCD	36.0	99.184	0.018	0.045	0.105	0.245	0.493
GCD	37.0	99.407	0.015	0.058	0.112	0.243	0.460
GCD	38.0	99.555	0.015	0.038	0.100	0.248	0.600
GCD	39.0	99.681	0.023	0.043	0.110	0.373	0.970
GCD	40.0	99.786	0.018	0.038	0.142	0.340	0.632
GCD	41.0	99.850	0.013	0.040	0.097	0.352	0.545
GCD	42.0	99.886	0.002	0.050	0.125	0.213	0.417
GCD	43.0	99.914	0.002	0.052	0.110	0.198	0.338
GCD	44.0	99.942	0.002	0.018	0.132	0.287	0.507
GCD	45.0	99.959	0.015	0.038	0.072	0.132	0.640
GCD	46.0	99.972	0.020	0.027	0.195	0.325	0.530
GCD	47.0	99.976	0.305	0.305	0.305	0.743	0.743
GCD	48.0	99.981	0.108	0.108	0.135	0.317	0.317
GCD	49.0	99.992	0.002	0.002	0.108	0.952	1.992
GCD	50.0	99.998	0.013	0.013	0.095	0.105	0.105
GCD	51.0	100.000	4.200	4.200	4.200	4.200	4.200