FastQCFastQC Report
Thu 7 Jul 2022
SRR3321258.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321258.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3770934
Sequences flagged as poor quality0
Sequence length36
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGA162420.4307155733831459TruSeq Adapter, Index 2 (100% over 36bp)
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC42510.11273069218395232No Hit
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC40300.10687007515909851No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)